More than 300 homologs were found in PanDaTox collection
for query gene Shewmr4_3042 on replicon NC_008321
Organism: Shewanella sp. MR-4



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  88.89 
 
 
630 aa  1149    Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  94.29 
 
 
630 aa  1212    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  89.05 
 
 
630 aa  1150    Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  89.05 
 
 
630 aa  1150    Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  100 
 
 
630 aa  1283    Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  99.68 
 
 
630 aa  1280    Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  89.05 
 
 
630 aa  1150    Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  97.14 
 
 
630 aa  1253    Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_009438  Sputcn32_3017  methyl-accepting chemotaxis sensory transducer  89.68 
 
 
630 aa  1115    Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  46.9 
 
 
630 aa  565  1.0000000000000001e-159  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  49.05 
 
 
639 aa  564  1.0000000000000001e-159  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  44.79 
 
 
631 aa  513  1e-144  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_01884  hypothetical protein  46.21 
 
 
627 aa  503  1e-141  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011312  VSAL_I0799  methyl-accepting chemotaxis protein  46.04 
 
 
624 aa  501  1e-140  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003139  methyl-accepting chemotaxis protein  45.58 
 
 
627 aa  498  1e-139  Vibrio sp. Ex25  Bacteria  normal  0.116124  n/a   
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  45.3 
 
 
633 aa  494  9.999999999999999e-139  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_009654  Mmwyl1_1383  methyl-accepting chemotaxis sensory transducer  41.04 
 
 
636 aa  459  9.999999999999999e-129  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00353653  normal  0.775857 
 
 
-
 
NC_009901  Spea_1629  methyl-accepting chemotaxis sensory transducer with Cache sensor  43.13 
 
 
623 aa  440  9.999999999999999e-123  Shewanella pealeana ATCC 700345  Bacteria  normal  0.438395  n/a   
 
 
-
 
NC_011663  Sbal223_0194  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.45 
 
 
623 aa  430  1e-119  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0252  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.54 
 
 
623 aa  432  1e-119  Shewanella woodyi ATCC 51908  Bacteria  normal  0.866394  normal 
 
 
-
 
NC_009052  Sbal_0193  methyl-accepting chemotaxis sensory transducer  42.45 
 
 
623 aa  430  1e-119  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_4274  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.45 
 
 
623 aa  430  1e-119  Shewanella baltica OS195  Bacteria  normal  normal  0.179842 
 
 
-
 
NC_009052  Sbal_0194  methyl-accepting chemotaxis sensory transducer  42.9 
 
 
623 aa  431  1e-119  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_4141  methyl-accepting chemotaxis sensory transducer  42.45 
 
 
623 aa  430  1e-119  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3825  methyl-accepting chemotaxis sensory transducer  42.29 
 
 
623 aa  427  1e-118  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3950  methyl-accepting chemotaxis sensory transducer  42.13 
 
 
623 aa  424  1e-117  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_0323  methyl-accepting chemotaxis sensory transducer  41.81 
 
 
623 aa  420  1e-116  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_3752  methyl-accepting chemotaxis sensory transducer  42.13 
 
 
623 aa  422  1e-116  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4557  methyl-accepting chemotaxis protein  41.65 
 
 
623 aa  417  9.999999999999999e-116  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011313  VSAL_II1022  methyl-accepting chemotaxis protein  40.76 
 
 
628 aa  397  1e-109  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.771007  n/a   
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  39.81 
 
 
628 aa  379  1e-103  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  39.12 
 
 
628 aa  371  1e-101  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0425  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.57 
 
 
630 aa  337  5e-91  Pseudomonas putida W619  Bacteria  normal  0.461628  normal 
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  36.12 
 
 
630 aa  335  2e-90  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.59 
 
 
626 aa  332  1e-89  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.2 
 
 
626 aa  328  2.0000000000000001e-88  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2480  methyl-accepting chemotaxis protein  34.44 
 
 
629 aa  328  2.0000000000000001e-88  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00119  methyl-accepting chemotaxis protein  34.65 
 
 
626 aa  321  3e-86  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  34.12 
 
 
625 aa  320  5e-86  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  33.49 
 
 
629 aa  320  5e-86  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_007005  Psyr_2246  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  34.91 
 
 
629 aa  320  7e-86  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.265681  normal  0.412954 
 
 
-
 
NC_010506  Swoo_0712  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.6 
 
 
627 aa  317  4e-85  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0412159  hitchhiker  0.0000400753 
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  33.65 
 
 
629 aa  317  5e-85  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  33.38 
 
 
632 aa  316  9e-85  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  33.18 
 
 
632 aa  315  1.9999999999999998e-84  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  33.49 
 
 
629 aa  314  2.9999999999999996e-84  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  33.02 
 
 
629 aa  312  1e-83  Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_012918  GM21_0525  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.29 
 
 
632 aa  308  1.0000000000000001e-82  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010501  PputW619_1011  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.12 
 
 
624 aa  306  6e-82  Pseudomonas putida W619  Bacteria  normal  0.752503  hitchhiker  0.0000000000251926 
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  34.32 
 
 
627 aa  304  3.0000000000000004e-81  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_007492  Pfl01_4431  chemotaxis sensory transducer, Cache sensor  32.68 
 
 
629 aa  303  7.000000000000001e-81  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3534  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  33.33 
 
 
629 aa  299  1e-79  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.667463  normal  0.0882884 
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  33.72 
 
 
623 aa  297  3e-79  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  33.18 
 
 
643 aa  295  2e-78  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_002947  PP_1371  methyl-accepting chemotaxis transducer  32.59 
 
 
624 aa  293  4e-78  Pseudomonas putida KT2440  Bacteria  normal  normal  0.318672 
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  32.87 
 
 
628 aa  293  8e-78  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_009512  Pput_4352  methyl-accepting chemotaxis sensory transducer  32.28 
 
 
624 aa  291  2e-77  Pseudomonas putida F1  Bacteria  normal  normal  0.0132701 
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.18 
 
 
628 aa  291  2e-77  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_010322  PputGB1_4443  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.44 
 
 
624 aa  291  3e-77  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.0000033578 
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  32.03 
 
 
626 aa  288  2e-76  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  31.39 
 
 
626 aa  288  2e-76  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  32.95 
 
 
623 aa  286  1.0000000000000001e-75  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_009831  Ssed_3477  putative methyl-accepting chemotaxis protein  35.69 
 
 
622 aa  285  2.0000000000000002e-75  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000522984 
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.51 
 
 
626 aa  285  2.0000000000000002e-75  Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_009456  VC0395_0316  methyl-accepting chemotaxis protein  33.72 
 
 
652 aa  280  5e-74  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2220  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  34.54 
 
 
646 aa  279  9e-74  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.071358  normal  0.520396 
 
 
-
 
NC_007492  Pfl01_0657  chemotaxis sensory transducer, Cache sensor  34.69 
 
 
648 aa  278  2e-73  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.511779  normal 
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  33.48 
 
 
639 aa  278  2e-73  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_004578  PSPTO_1061  methyl-accepting chemotaxis protein  32.08 
 
 
626 aa  277  4e-73  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.646209  n/a   
 
 
-
 
NC_007005  Psyr_0906  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  31.19 
 
 
626 aa  275  3e-72  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A1741  methyl-accepting chemotaxis protein  38.59 
 
 
623 aa  274  5.000000000000001e-72  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2448  methyl-accepting chemotaxis protein  33.46 
 
 
646 aa  271  2.9999999999999997e-71  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.718596  n/a   
 
 
-
 
NC_009052  Sbal_2364  methyl-accepting chemotaxis sensory transducer  34.66 
 
 
622 aa  268  2e-70  Shewanella baltica OS155  Bacteria  normal  0.493821  n/a   
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  34.15 
 
 
638 aa  266  5.999999999999999e-70  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  33.45 
 
 
638 aa  266  7e-70  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_010501  PputW619_4580  methyl-accepting chemotaxis sensory transducer  32.3 
 
 
648 aa  266  8.999999999999999e-70  Pseudomonas putida W619  Bacteria  normal  normal  0.0108713 
 
 
-
 
NC_010682  Rpic_0536  methyl-accepting chemotaxis sensory transducer with Cache sensor  29 
 
 
609 aa  266  1e-69  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  33.52 
 
 
636 aa  261  2e-68  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  33.83 
 
 
638 aa  261  3e-68  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_007336  Reut_C6319  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  30.35 
 
 
601 aa  260  5.0000000000000005e-68  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_0623  methyl-accepting chemotaxis sensory transducer  32.06 
 
 
647 aa  260  5.0000000000000005e-68  Pseudomonas putida F1  Bacteria  normal  0.494937  normal 
 
 
-
 
NC_012856  Rpic12D_0523  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.53 
 
 
608 aa  259  8e-68  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  36.97 
 
 
645 aa  259  9e-68  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0584  methyl-accepting chemotaxis transducer  31.91 
 
 
647 aa  259  1e-67  Pseudomonas putida KT2440  Bacteria  normal  0.77697  normal  0.644217 
 
 
-
 
NC_009438  Sputcn32_2121  methyl-accepting chemotaxis sensory transducer  34.54 
 
 
622 aa  258  3e-67  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  33.71 
 
 
713 aa  254  3e-66  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_009654  Mmwyl1_0130  methyl-accepting chemotaxis sensory transducer  30.63 
 
 
671 aa  252  2e-65  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  33.71 
 
 
712 aa  251  3e-65  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  36.9 
 
 
558 aa  251  3e-65  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0629  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.72 
 
 
647 aa  248  3e-64  Pseudomonas putida GB-1  Bacteria  normal  0.624074  hitchhiker  0.000681907 
 
 
-
 
NC_008321  Shewmr4_0271  methyl-accepting chemotaxis sensory transducer  36.73 
 
 
638 aa  247  4.9999999999999997e-64  Shewanella sp. MR-4  Bacteria  normal  0.758035  hitchhiker  0.0000678809 
 
 
-
 
NC_008322  Shewmr7_3750  methyl-accepting chemotaxis sensory transducer  36.73 
 
 
638 aa  247  4.9999999999999997e-64  Shewanella sp. MR-7  Bacteria  normal  0.666265  normal  0.186245 
 
 
-
 
NC_008577  Shewana3_0272  methyl-accepting chemotaxis sensory transducer  36.52 
 
 
638 aa  247  4.9999999999999997e-64  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00090491  hitchhiker  0.000000349734 
 
 
-
 
NC_008061  Bcen_3992  methyl-accepting chemotaxis sensory transducer  28.82 
 
 
599 aa  246  6.999999999999999e-64  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4375  methyl-accepting chemotaxis sensory transducer  28.82 
 
 
599 aa  246  6.999999999999999e-64  Burkholderia cenocepacia HI2424  Bacteria  normal  0.480091  normal 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  33.27 
 
 
712 aa  245  1.9999999999999999e-63  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_007908  Rfer_3449  methyl-accepting chemotaxis sensory transducer  28.5 
 
 
632 aa  244  3e-63  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_4247  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.64 
 
 
599 aa  244  3e-63  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  33.83 
 
 
716 aa  244  3.9999999999999997e-63  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_010515  Bcenmc03_5980  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.82 
 
 
599 aa  244  3.9999999999999997e-63  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>