More than 300 homologs were found in PanDaTox collection
for query gene Pmen_2154 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  51.75 
 
 
626 aa  635    Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  100 
 
 
627 aa  1264    Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  42.83 
 
 
623 aa  496  1e-139  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  41.2 
 
 
623 aa  474  1e-132  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_009456  VC0395_0316  methyl-accepting chemotaxis protein  42.13 
 
 
652 aa  466  9.999999999999999e-131  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2364  methyl-accepting chemotaxis sensory transducer  40.51 
 
 
622 aa  459  9.999999999999999e-129  Shewanella baltica OS155  Bacteria  normal  0.493821  n/a   
 
 
-
 
NC_009831  Ssed_3477  putative methyl-accepting chemotaxis protein  40.19 
 
 
622 aa  454  1.0000000000000001e-126  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000522984 
 
 
-
 
NC_009438  Sputcn32_2121  methyl-accepting chemotaxis sensory transducer  40.51 
 
 
622 aa  446  1.0000000000000001e-124  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  37 
 
 
629 aa  434  1e-120  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  36.84 
 
 
629 aa  431  1e-119  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_009457  VC0395_A1741  methyl-accepting chemotaxis protein  41.68 
 
 
623 aa  431  1e-119  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  35.89 
 
 
629 aa  408  1.0000000000000001e-112  Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  36.04 
 
 
629 aa  400  9.999999999999999e-111  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  35.73 
 
 
625 aa  398  1e-109  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  34.98 
 
 
632 aa  391  1e-107  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  34.82 
 
 
632 aa  387  1e-106  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  35.65 
 
 
630 aa  383  1e-105  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0425  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.91 
 
 
630 aa  378  1e-103  Pseudomonas putida W619  Bacteria  normal  0.461628  normal 
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  33.6 
 
 
628 aa  374  1e-102  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.6 
 
 
628 aa  373  1e-102  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_007492  Pfl01_4431  chemotaxis sensory transducer, Cache sensor  36.35 
 
 
629 aa  375  1e-102  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  33.6 
 
 
643 aa  372  1e-101  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_007005  Psyr_3534  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  34.45 
 
 
629 aa  363  4e-99  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.667463  normal  0.0882884 
 
 
-
 
NC_010501  PputW619_1011  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.89 
 
 
624 aa  361  2e-98  Pseudomonas putida W619  Bacteria  normal  0.752503  hitchhiker  0.0000000000251926 
 
 
-
 
NC_010322  PputGB1_4443  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.2 
 
 
624 aa  360  4e-98  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.0000033578 
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  32.7 
 
 
626 aa  359  7e-98  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_002947  PP_1371  methyl-accepting chemotaxis transducer  36.2 
 
 
624 aa  359  8e-98  Pseudomonas putida KT2440  Bacteria  normal  normal  0.318672 
 
 
-
 
NC_009512  Pput_4352  methyl-accepting chemotaxis sensory transducer  36.04 
 
 
624 aa  357  2.9999999999999997e-97  Pseudomonas putida F1  Bacteria  normal  normal  0.0132701 
 
 
-
 
NC_004578  PSPTO_2480  methyl-accepting chemotaxis protein  33.33 
 
 
629 aa  354  2e-96  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2246  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  33.97 
 
 
629 aa  351  2e-95  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.265681  normal  0.412954 
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.01 
 
 
626 aa  350  5e-95  Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_004578  PSPTO_1061  methyl-accepting chemotaxis protein  33.12 
 
 
626 aa  343  4e-93  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.646209  n/a   
 
 
-
 
NC_007005  Psyr_0906  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  32.85 
 
 
626 aa  343  5.999999999999999e-93  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_011312  VSAL_I0799  methyl-accepting chemotaxis protein  34.28 
 
 
624 aa  326  7e-88  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  33.71 
 
 
630 aa  323  5e-87  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  34.07 
 
 
630 aa  322  1.9999999999999998e-86  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  33.39 
 
 
630 aa  320  7e-86  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.39 
 
 
630 aa  319  1e-85  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  33.65 
 
 
630 aa  317  4e-85  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  33.97 
 
 
630 aa  316  9.999999999999999e-85  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  33.23 
 
 
630 aa  316  9.999999999999999e-85  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_009783  VIBHAR_01884  hypothetical protein  33.8 
 
 
627 aa  315  1.9999999999999998e-84  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  39.14 
 
 
712 aa  315  1.9999999999999998e-84  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.02 
 
 
626 aa  314  2.9999999999999996e-84  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  33.81 
 
 
630 aa  313  3.9999999999999997e-84  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  33.81 
 
 
630 aa  313  7.999999999999999e-84  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.08 
 
 
626 aa  312  9e-84  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  38.13 
 
 
712 aa  309  9e-83  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009654  Mmwyl1_1383  methyl-accepting chemotaxis sensory transducer  35.16 
 
 
636 aa  309  1.0000000000000001e-82  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00353653  normal  0.775857 
 
 
-
 
NC_012918  GM21_0525  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.91 
 
 
632 aa  309  1.0000000000000001e-82  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013456  VEA_003139  methyl-accepting chemotaxis protein  33.59 
 
 
627 aa  306  6e-82  Vibrio sp. Ex25  Bacteria  normal  0.116124  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  38.39 
 
 
713 aa  303  7.000000000000001e-81  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  32.28 
 
 
628 aa  302  1e-80  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0712  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.97 
 
 
627 aa  301  3e-80  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0412159  hitchhiker  0.0000400753 
 
 
-
 
NC_009783  VIBHAR_00119  methyl-accepting chemotaxis protein  34.39 
 
 
626 aa  300  7e-80  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  31.91 
 
 
628 aa  295  2e-78  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  39.48 
 
 
716 aa  293  6e-78  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009438  Sputcn32_3017  methyl-accepting chemotaxis sensory transducer  33.44 
 
 
630 aa  290  8e-77  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_4216  methyl-accepting chemotaxis sensory transducer  33.94 
 
 
647 aa  289  1e-76  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  32.08 
 
 
633 aa  288  2e-76  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  34.63 
 
 
631 aa  288  2.9999999999999996e-76  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4382  chemotaxis sensory transducer  37.41 
 
 
738 aa  284  4.0000000000000003e-75  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.218372 
 
 
-
 
NC_008577  Shewana3_3950  methyl-accepting chemotaxis sensory transducer  33.49 
 
 
623 aa  283  8.000000000000001e-75  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  35.44 
 
 
639 aa  283  9e-75  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_3557  methyl-accepting chemotaxis transducer  39.36 
 
 
714 aa  281  2e-74  Pseudomonas putida KT2440  Bacteria  normal  0.386044  normal 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  39.87 
 
 
559 aa  281  2e-74  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0365  accessory colonization factor AcfB  31.47 
 
 
626 aa  281  2e-74  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3825  methyl-accepting chemotaxis sensory transducer  33.49 
 
 
623 aa  281  3e-74  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0237  methyl-accepting chemotaxis sensory transducer  30.46 
 
 
632 aa  280  4e-74  Shewanella loihica PV-4  Bacteria  normal  normal  0.997473 
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  38.19 
 
 
714 aa  281  4e-74  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  37.13 
 
 
714 aa  280  5e-74  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  37.9 
 
 
714 aa  280  8e-74  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_011313  VSAL_II1022  methyl-accepting chemotaxis protein  30.47 
 
 
628 aa  279  1e-73  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.771007  n/a   
 
 
-
 
NC_004347  SO_4557  methyl-accepting chemotaxis protein  33.17 
 
 
623 aa  279  1e-73  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_3752  methyl-accepting chemotaxis sensory transducer  36.67 
 
 
623 aa  279  1e-73  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2217  methyl-accepting chemotaxis sensory transducer  39.17 
 
 
714 aa  277  4e-73  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_2544  methyl-accepting chemotaxis sensory transducer  31.54 
 
 
633 aa  277  4e-73  Shewanella baltica OS185  Bacteria  hitchhiker  0.00517521  n/a   
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  31.28 
 
 
640 aa  276  6e-73  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_009901  Spea_1629  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.62 
 
 
623 aa  274  4.0000000000000004e-72  Shewanella pealeana ATCC 700345  Bacteria  normal  0.438395  n/a   
 
 
-
 
NC_007492  Pfl01_3770  chemotaxis sensory transducer  37.03 
 
 
715 aa  273  6e-72  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4580  methyl-accepting chemotaxis sensory transducer  35.1 
 
 
648 aa  273  1e-71  Pseudomonas putida W619  Bacteria  normal  normal  0.0108713 
 
 
-
 
NC_007492  Pfl01_0657  chemotaxis sensory transducer, Cache sensor  34.65 
 
 
648 aa  271  2e-71  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.511779  normal 
 
 
-
 
NC_010501  PputW619_2074  methyl-accepting chemotaxis sensory transducer  39.14 
 
 
714 aa  271  4e-71  Pseudomonas putida W619  Bacteria  normal  0.203311  normal 
 
 
-
 
NC_009456  VC0395_0962  methyl-accepting chemotaxis protein  31.19 
 
 
643 aa  270  5.9999999999999995e-71  Vibrio cholerae O395  Bacteria  hitchhiker  0.000917898  n/a   
 
 
-
 
NC_009831  Ssed_3532  methyl-accepting chemotaxis sensory transducer  37.97 
 
 
555 aa  269  1e-70  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0193  methyl-accepting chemotaxis sensory transducer  36.93 
 
 
623 aa  269  1e-70  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  36.38 
 
 
645 aa  268  2e-70  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_1228  methyl-accepting chemotaxis transducer  37.71 
 
 
688 aa  268  2.9999999999999995e-70  Pseudomonas putida KT2440  Bacteria  normal  normal  0.739741 
 
 
-
 
NC_011663  Sbal223_0194  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.93 
 
 
623 aa  267  4e-70  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_4141  methyl-accepting chemotaxis sensory transducer  36.93 
 
 
623 aa  267  4e-70  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_1257  methyl-accepting chemotaxis sensory transducer  37.64 
 
 
688 aa  267  4e-70  Pseudomonas putida F1  Bacteria  normal  0.124474  normal 
 
 
-
 
NC_009997  Sbal195_4274  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.93 
 
 
623 aa  267  4e-70  Shewanella baltica OS195  Bacteria  normal  normal  0.179842 
 
 
-
 
NC_004578  PSPTO_2448  methyl-accepting chemotaxis protein  34.39 
 
 
646 aa  267  5e-70  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.718596  n/a   
 
 
-
 
NC_010322  PputGB1_4190  methyl-accepting chemotaxis sensory transducer  37.86 
 
 
688 aa  266  5.999999999999999e-70  Pseudomonas putida GB-1  Bacteria  normal  0.251316  normal 
 
 
-
 
NC_010501  PputW619_3984  methyl-accepting chemotaxis sensory transducer  38.05 
 
 
688 aa  266  5.999999999999999e-70  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_0734  methyl-accepting chemotaxis sensory transducer  38.9 
 
 
643 aa  266  8e-70  Pseudomonas mendocina ymp  Bacteria  normal  0.770301  normal 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  42.48 
 
 
638 aa  266  8.999999999999999e-70  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_010322  PputGB1_2365  methyl-accepting chemotaxis sensory transducer  38.61 
 
 
714 aa  266  8.999999999999999e-70  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0252  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.81 
 
 
623 aa  266  1e-69  Shewanella woodyi ATCC 51908  Bacteria  normal  0.866394  normal 
 
 
-
 
NC_002947  PP_0584  methyl-accepting chemotaxis transducer  35.25 
 
 
647 aa  265  2e-69  Pseudomonas putida KT2440  Bacteria  normal  0.77697  normal  0.644217 
 
 
-
 
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