Gene PputW619_1723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1723 
Symbol 
ID6110669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp1917876 
End bp1919756 
Gene Length1881 bp 
Protein Length626 aa 
Translation table11 
GC content63% 
IMG OID641621514 
Productmethyl-accepting chemotaxis sensory transducer with Cache sensor 
Protein accessionYP_001748596 
Protein GI170720908 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.372844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGA AATTTCGCCA CAAAATCCTC CTCAGCGCGT GCGGGGTGGT GGTACTGGCT 
TTTGCCCTGT TCACGCTCTA CAACGATTAC CTGCAACGCA AGACCATCGC CCAGAACATC
GAGTCATCGG TGCAACAGTC CGGTGCGCTG ACTGCCAGCA GCGTGCAGAA CTGGATGAGC
GGGCGCATCC TGGTGCTTGA GAACCTGGCC CAGGACATTG CTGAACAAGG GGCGGGCGAT
ACCCTGGCCG GGCTGATCGA GCAGCCTTCC TACACGCAAA ATTTCCTGTT CACCTACCTG
GGCCAGGCCA ATGGTGTGTT CACCCAGCGC CCCAATGCCC AGATGCCGGC CGGTTACGAC
CCACGCCAGC GCCCATGGTA CGGCGCCGCC GCAAACGCCG GGCAGACCGT GCTCACCGCC
CCTTACCAAG GCGCCGTCGG TGGCCTGATG GTGACCATCG CCACGCCGGT AAAGCGTGAC
GGCGAAATGC TCGGAGTGGT CGGTGGCGAC CTGACCCTCG ATACCTTGGT GCAGATCATC
AATTCGGTCG ACTTCGGCGG CATCGGCCAC GCCTTCCTCG CCGACAGCAG CGGCCAGGTG
ATCGTCAGCC CCGACAAAGA CCAGGTGATG AAGAACCTCA AGGACATCTA CCCAGGCTCC
GGCCTGCGCG TGGCGGCTGA CATGCAGGAT GTCACCCTCG ATGGCCAGCA GCGGTTGATC
TCCTTTGCCC CGGTGGCGGG CTTGCCGTCT GCCCAGTGGT ATATCGGCCT GTCGATCGAC
AAGGACAAGG CCTATGCCGC ATTGGGCCAG TTCCGCACCT CGGCGATCAT CGCCATGGTC
ATTGCCGTGG CGGCCATCGC CGGGCTGCTA GGCTTGCTGA TCCCGGTGCT GATGCGACCG
CTGACCACCA TGGGCCGCGC CATGCGCGAC ATCGCCGAAG GTGAAGGCGA CCTGACCCGC
CGCCTGGACG TGCAGCGCAA GGACGAGTTC GGCGAACTGG CCACCTCGTT CAACCACTTT
GTAGAACGCA TTCACACCTC GATCAGCGAA GTGTCGTCGG CCACGCGGCT GGTGCACGAC
CTGTCGGAAA AGGTGGTCAA TGCCTCCAAT GCCTCGATCA TCGGTTCCGA AGAGCAGAGC
ATGCGCACCA ACAGTGTCGC TGCGGCCATC AACCAACTGG GTGCCGCCAC TCAGGAAATC
GCACGCAACG CTGCCGACGC TTCGCAGCAC GCCAGCGGCG CCAGCGAGCA GGCCAATGGC
GGGCGCGAAG TGGTGGAAGA AGCGATCAAC GCCATGACCG CCCTGTCGCA GCGCATCAGC
GAATCCTGCG AACAGATCGA AACGCTCAAT GCCAGCACCG ACGAAATCGG CAAGATCCTC
GACGTGATCA AGGGCATCTC CCAGCAGACC AACCTGCTGG CGCTCAACGC CGCGATCGAA
GCGGCCCGTG CGGGTGAAGC CGGGCGCGGG TTTGCCGTGG TGGCCGACGA GGTTCGCAAC
CTGGCGCACC GCACCCAGGA ATCGGCGGAA GAGATCCACC GCATGATCAC CAGCCTGCAG
GTCGGCTCAC GCGAGGCGGT GCACACCATG AACACCAGCC AGGTGTCCAG CGAACAGACC
GTGCAGGTCG CCAACCAGGC CGGCGTACGC CTGGCCAGCG TGACCCAGCG CATCGGCGAG
ATCGACGGCA TGAACCAGTC GGTGGCCACC GCTACCGAAG AGCAGACCGC CGTGGTCGAG
AGCCTGAACC TGGACATCAC CCAGATCAAT GCGCTCAACC AGCAAGGGGT AGAGAACCTC
AACCAGACGC TGCAACATTG CGATGCGCTG GCGCAGCAGG CTGGGCGTTT GAAGCAACTG
GTGGGCAGCT TCCGCATCTG A
 
Protein sequence
MNLKFRHKIL LSACGVVVLA FALFTLYNDY LQRKTIAQNI ESSVQQSGAL TASSVQNWMS 
GRILVLENLA QDIAEQGAGD TLAGLIEQPS YTQNFLFTYL GQANGVFTQR PNAQMPAGYD
PRQRPWYGAA ANAGQTVLTA PYQGAVGGLM VTIATPVKRD GEMLGVVGGD LTLDTLVQII
NSVDFGGIGH AFLADSSGQV IVSPDKDQVM KNLKDIYPGS GLRVAADMQD VTLDGQQRLI
SFAPVAGLPS AQWYIGLSID KDKAYAALGQ FRTSAIIAMV IAVAAIAGLL GLLIPVLMRP
LTTMGRAMRD IAEGEGDLTR RLDVQRKDEF GELATSFNHF VERIHTSISE VSSATRLVHD
LSEKVVNASN ASIIGSEEQS MRTNSVAAAI NQLGAATQEI ARNAADASQH ASGASEQANG
GREVVEEAIN AMTALSQRIS ESCEQIETLN ASTDEIGKIL DVIKGISQQT NLLALNAAIE
AARAGEAGRG FAVVADEVRN LAHRTQESAE EIHRMITSLQ VGSREAVHTM NTSQVSSEQT
VQVANQAGVR LASVTQRIGE IDGMNQSVAT ATEEQTAVVE SLNLDITQIN ALNQQGVENL
NQTLQHCDAL AQQAGRLKQL VGSFRI