| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3489 |
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| Symbol | |
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| ID | 5193224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3896528 |
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| End bp | 3898414 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640587941 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001268799 |
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| Protein GI | 148548697 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.228387 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGA AATTTCGCCA CAAGATCCTG CTCAGCGCCT GCGGCGTCGT GGTCCTGGCA
TTTGCCCTGT TCACGCTCTA CAACGACTAC CTGCAACGCA ATACCATCCG CCAGAATATC
GAAGCCTCGG TGCAGCAGTC CGGTGCACTG ACCGCCAGCA GTGTGCAGAA CTGGATGAGC
GGGCGCATTC TGGTGCTGGA GAACCTGGCC CAGGACATCG GCCAGCAAGG CGCCGGCGAC
ACCTTGGCAG GGCTGATCGA GCAGCCGTCC TACACGCGTA ACTTCCTGTT CACCTACCTG
GGCCAGGCCA ACGGCGAATT CACCCAGCGC CCGGATGCCC AGATGCCCGC CGGTTACGAC
CCGCGCCAGC GCCCTTGGTA TGGCGCCGCC GCCAACGCCG GGCAGACCGT GCTGACCGCC
CCGTACCAGG GGGCAGTCGG TGGCCTGATG GTGACCATCG CCACGCCGGT GAAGAGCAAG
CGCAATGGCG AACTGATCGG TGTGGTCGGC GGTGACGTTA CCCTCGACAC CCTCGTCGAG
ATCATCAACT CGGTCGACTT TGGCGGCATC GGTCACGCCT TCCTGGCCGA CGCCAATGGC
CAGGTGATCG TCAGCCCGAA CAAAGACCAG GTGATGAAAA ACCTCAAGGA CATCTACCCA
GGCAGCAACC TGCGGGTTGC CGCCGGCATG CAGGATGTCA CCCTCAACGG CCAGGACCGC
ATCATCTCGT TCGCACCGGT GGCCGGCCTG CCTTCGGCGC AGTGGTACAT CGGGCTGTCG
ATCGACAGGG ACAAGGCCTA TGCCGCGCTC AGCCAGTTCC GCACCTCGGC GATCATTGCC
ATGCTGATTG CCGTGGCCGC CATCGCCGGC CTGCTCGGCC TGCTGATTCC GGTGCTGATG
AGCCCGCTGA CCACCATGGG CCGCGCCATG CGCGACATCG CCGAGGGTGA AGGTGACCTT
ACCCGCCGCC TGGCCGTGCA GAACAAGGAC GAATTCGGCG AACTGGCTAC CTCGTTCAAC
CGCTTTGTCG AACGTATCCA TGCCTCGATC AGCGAAGTGT CCTCGGCCAC CCGCCTGGTG
CATGACCTTT CGGAGAAAGT GGTCAGCGCG TCCAATGCGT CGATCAGCGG TTCTGAAGAA
CAGAGCATGC GCACCAACAG CGTCGCTGCG GCCATCAACG AACTGGGCGC CGCCACCCAG
GAAATCGCCC GCAACGCCGC AGATGCTTCG CAACATGCCA GCGGTGCCAG CGAACAGGCG
CACGGTGGCC GTGAAGTGGT TGAAGAAGCC ATCAGCGCCA TGACTGCCCT GTCGCAACGG
ATCAGCGAGT CGTGCGCGCA GATCGAAACG CTCAACGCCA GCACCGACGA AATCGGCAAG
ATCCTCGACG TGATCAAGGG CATTTCCCAG CAGACCAACC TGCTGGCACT GAACGCCGCC
ATCGAAGCGG CCCGTGCCGG TGAGGCCGGC CGTGGCTTTG CCGTGGTGGC CGACGAGGTG
CGCAACCTGG CGCACCGTAC CCAGGAGTCG GCGGAAGAAA TCCACCGCAT GATCACCAGC
CTGCAGGTGG GCTCGCGCGA AGCGGTGCAT ACCATGAACA CCAGCCAAGT CTCCAGCGAG
CAGACCGTAC AGGTGGCCAA CCAGGCCGGC GAACGCCTGG CCAGCGTGAC CCAGCGCATT
GGCGAAATCG ATGGCATGAA CCAGTCGGTG GCGACAGCGA CCGAAGAACA GACCGCCGTG
GTCGAAAGCC TCAACCTGGA CATCACCCAG ATCAACGCCC TGAACCAGCA AGGGGTGGAG
AACCTCAACG AGACCCTGCG CCATTGCGAC CAGCTGGCCC AGCAGGCTGG GCGTTTGAAG
CAGTTGGTGG GCAGCTTCAG GATTTAA
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| Protein sequence | MNLKFRHKIL LSACGVVVLA FALFTLYNDY LQRNTIRQNI EASVQQSGAL TASSVQNWMS
GRILVLENLA QDIGQQGAGD TLAGLIEQPS YTRNFLFTYL GQANGEFTQR PDAQMPAGYD
PRQRPWYGAA ANAGQTVLTA PYQGAVGGLM VTIATPVKSK RNGELIGVVG GDVTLDTLVE
IINSVDFGGI GHAFLADANG QVIVSPNKDQ VMKNLKDIYP GSNLRVAAGM QDVTLNGQDR
IISFAPVAGL PSAQWYIGLS IDRDKAYAAL SQFRTSAIIA MLIAVAAIAG LLGLLIPVLM
SPLTTMGRAM RDIAEGEGDL TRRLAVQNKD EFGELATSFN RFVERIHASI SEVSSATRLV
HDLSEKVVSA SNASISGSEE QSMRTNSVAA AINELGAATQ EIARNAADAS QHASGASEQA
HGGREVVEEA ISAMTALSQR ISESCAQIET LNASTDEIGK ILDVIKGISQ QTNLLALNAA
IEAARAGEAG RGFAVVADEV RNLAHRTQES AEEIHRMITS LQVGSREAVH TMNTSQVSSE
QTVQVANQAG ERLASVTQRI GEIDGMNQSV ATATEEQTAV VESLNLDITQ INALNQQGVE
NLNETLRHCD QLAQQAGRLK QLVGSFRI
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