Gene Pput_3489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3489 
Symbol 
ID5193224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3896528 
End bp3898414 
Gene Length1887 bp 
Protein Length628 aa 
Translation table11 
GC content63% 
IMG OID640587941 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001268799 
Protein GI148548697 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.228387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGA AATTTCGCCA CAAGATCCTG CTCAGCGCCT GCGGCGTCGT GGTCCTGGCA 
TTTGCCCTGT TCACGCTCTA CAACGACTAC CTGCAACGCA ATACCATCCG CCAGAATATC
GAAGCCTCGG TGCAGCAGTC CGGTGCACTG ACCGCCAGCA GTGTGCAGAA CTGGATGAGC
GGGCGCATTC TGGTGCTGGA GAACCTGGCC CAGGACATCG GCCAGCAAGG CGCCGGCGAC
ACCTTGGCAG GGCTGATCGA GCAGCCGTCC TACACGCGTA ACTTCCTGTT CACCTACCTG
GGCCAGGCCA ACGGCGAATT CACCCAGCGC CCGGATGCCC AGATGCCCGC CGGTTACGAC
CCGCGCCAGC GCCCTTGGTA TGGCGCCGCC GCCAACGCCG GGCAGACCGT GCTGACCGCC
CCGTACCAGG GGGCAGTCGG TGGCCTGATG GTGACCATCG CCACGCCGGT GAAGAGCAAG
CGCAATGGCG AACTGATCGG TGTGGTCGGC GGTGACGTTA CCCTCGACAC CCTCGTCGAG
ATCATCAACT CGGTCGACTT TGGCGGCATC GGTCACGCCT TCCTGGCCGA CGCCAATGGC
CAGGTGATCG TCAGCCCGAA CAAAGACCAG GTGATGAAAA ACCTCAAGGA CATCTACCCA
GGCAGCAACC TGCGGGTTGC CGCCGGCATG CAGGATGTCA CCCTCAACGG CCAGGACCGC
ATCATCTCGT TCGCACCGGT GGCCGGCCTG CCTTCGGCGC AGTGGTACAT CGGGCTGTCG
ATCGACAGGG ACAAGGCCTA TGCCGCGCTC AGCCAGTTCC GCACCTCGGC GATCATTGCC
ATGCTGATTG CCGTGGCCGC CATCGCCGGC CTGCTCGGCC TGCTGATTCC GGTGCTGATG
AGCCCGCTGA CCACCATGGG CCGCGCCATG CGCGACATCG CCGAGGGTGA AGGTGACCTT
ACCCGCCGCC TGGCCGTGCA GAACAAGGAC GAATTCGGCG AACTGGCTAC CTCGTTCAAC
CGCTTTGTCG AACGTATCCA TGCCTCGATC AGCGAAGTGT CCTCGGCCAC CCGCCTGGTG
CATGACCTTT CGGAGAAAGT GGTCAGCGCG TCCAATGCGT CGATCAGCGG TTCTGAAGAA
CAGAGCATGC GCACCAACAG CGTCGCTGCG GCCATCAACG AACTGGGCGC CGCCACCCAG
GAAATCGCCC GCAACGCCGC AGATGCTTCG CAACATGCCA GCGGTGCCAG CGAACAGGCG
CACGGTGGCC GTGAAGTGGT TGAAGAAGCC ATCAGCGCCA TGACTGCCCT GTCGCAACGG
ATCAGCGAGT CGTGCGCGCA GATCGAAACG CTCAACGCCA GCACCGACGA AATCGGCAAG
ATCCTCGACG TGATCAAGGG CATTTCCCAG CAGACCAACC TGCTGGCACT GAACGCCGCC
ATCGAAGCGG CCCGTGCCGG TGAGGCCGGC CGTGGCTTTG CCGTGGTGGC CGACGAGGTG
CGCAACCTGG CGCACCGTAC CCAGGAGTCG GCGGAAGAAA TCCACCGCAT GATCACCAGC
CTGCAGGTGG GCTCGCGCGA AGCGGTGCAT ACCATGAACA CCAGCCAAGT CTCCAGCGAG
CAGACCGTAC AGGTGGCCAA CCAGGCCGGC GAACGCCTGG CCAGCGTGAC CCAGCGCATT
GGCGAAATCG ATGGCATGAA CCAGTCGGTG GCGACAGCGA CCGAAGAACA GACCGCCGTG
GTCGAAAGCC TCAACCTGGA CATCACCCAG ATCAACGCCC TGAACCAGCA AGGGGTGGAG
AACCTCAACG AGACCCTGCG CCATTGCGAC CAGCTGGCCC AGCAGGCTGG GCGTTTGAAG
CAGTTGGTGG GCAGCTTCAG GATTTAA
 
Protein sequence
MNLKFRHKIL LSACGVVVLA FALFTLYNDY LQRNTIRQNI EASVQQSGAL TASSVQNWMS 
GRILVLENLA QDIGQQGAGD TLAGLIEQPS YTRNFLFTYL GQANGEFTQR PDAQMPAGYD
PRQRPWYGAA ANAGQTVLTA PYQGAVGGLM VTIATPVKSK RNGELIGVVG GDVTLDTLVE
IINSVDFGGI GHAFLADANG QVIVSPNKDQ VMKNLKDIYP GSNLRVAAGM QDVTLNGQDR
IISFAPVAGL PSAQWYIGLS IDRDKAYAAL SQFRTSAIIA MLIAVAAIAG LLGLLIPVLM
SPLTTMGRAM RDIAEGEGDL TRRLAVQNKD EFGELATSFN RFVERIHASI SEVSSATRLV
HDLSEKVVSA SNASISGSEE QSMRTNSVAA AINELGAATQ EIARNAADAS QHASGASEQA
HGGREVVEEA ISAMTALSQR ISESCAQIET LNASTDEIGK ILDVIKGISQ QTNLLALNAA
IEAARAGEAG RGFAVVADEV RNLAHRTQES AEEIHRMITS LQVGSREAVH TMNTSQVSSE
QTVQVANQAG ERLASVTQRI GEIDGMNQSV ATATEEQTAV VESLNLDITQ INALNQQGVE
NLNETLRHCD QLAQQAGRLK QLVGSFRI