Gene SO_1056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_1056 
Symbol 
ID1168895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp1094947 
End bp1096839 
Gene Length1893 bp 
Protein Length630 aa 
Translation table11 
GC content47% 
IMG OID637343014 
Productmethyl-accepting chemotaxis protein 
Protein accessionNP_716683 
Protein GI24372641 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTCAA CACTTAAAAC TCGCCTACTT TTTAGTAGTC TCTTTGCTGT ATTCATTACC 
GTCGCAGTGC TGGTAAGTAT TTCAAGTTAT GTCATTAGAA ATCATGCAAT AGATAATACC
CAAGGTGAGA TCGATCAACT CGCTAACACC TTTGCAGAAG GTATTGGTCT GTGGATGCAA
GATAGAAAAA CAGCCATCAC TAGCCTTAAA AAGACTGTTG AAGCTGATCC CAATGTGCAA
ATTACCCCTT ATTTATTACA GGCCCACAAT GCGATGGGAT TTGCACTCAC GTATTTTGGT
GACGAGCAAG GCAACATGTA CCGCCAAGAC CCCGCGCTCA ATACCGCAAA CTATGACCCA
CGCGAACGCC CTTGGTATAT GGATGCTAAA GCTGCCAATG CCATGGTAAT GACGGCCCCC
TATGTTAGCG CCACGCTTAA AAAACAAGTT GTCACTATCG CAGAGCCCGT GATGGTCTCT
GGTCGACTCT TCGGCGTAGC CGCCGCAAAC CTGACCATAG ATCAACTCAC CGATGCGGTG
CAACGACTCG AAGTGCCAGG CAAGGGCTAC ACTCTGATGG TAGACACCGC AGGACTTATC
ATTAGCCACC CCAACACTCA GCTCAATAAC CAACAACTTA CCAAAATTGA TAGTCATTTC
ACCCCCAGTT GGCTATCCCA GCGCGCCAAC GCCAATACCA TGGAAGAGCG CGAGCTAGAT
GGTGGGACTC AATTAGTCTA TGTAGCGGCC GTCCCCTCCA CTGATTGGGC ATTAATATTT
GTGATGAATA AGCAAGAAAT CATGTCACAA GCCACATCGC TTGCTTGGTG GATGTCAGCC
GTGGGCGTGG GCTTACTGGT AATATTTGGC TTGGTCTTAG TCGCAATTTT CAAAATGCAA
TTTAAAGACT TAGAGCGCGT AGCTTTAGCA CTCAACGATA TAGCCGAAGG AGATGGCGAT
CTGACCGTTA GAATCCATAC CGCAAACAGC CATGATGAAA TTGGCATCTT GGCTTCAGGT
TTTAACCGCT TTGTTGAACG CCTGCATGGC ATGATTTCAA GAATGCACAA TATTGCGGGC
CAACTTGAAT ATCAAGCCAA GGGCAGCAGT GCTTCTGCAG CAGATAATAG TCAACGCATT
GAGGTTCAAC AGGATGAAGT GACCATGGTT GCAACCGCCG TTACCGAAAT GGCCAGCGCC
ACCGAAGAGA TTGCCAGCAA TGCTGAGCAT ACCGCACAAA CAGCGCAAAA TGCCGTAAGC
CTTTCAAATC ATGGCCAAAA ACAAGTGATG CAAAGTCAGC AATCTATTCG TAACTTAGCG
AATGAGGTCG ATACCGCAGG GCGTATTATC AGTGAGCTGA ATGAACACTC ACAAAAAATT
AATAGCATTC TATTAACGAT CAGTGGGATT GCAGAGCAAA CTAACTTACT GGCGTTAAAC
GCTGCCATTG AAGCCGCACG TGCGGGTGAA CAAGGTCGCG GTTTCGCTGT CGTTGCCGAT
GAAGTTCGCG TATTATCACA ACGAACCCAT TCTTCAACCC AAGAAATTCA AGCCATGATT
GAAACCTTGC AACAAACGGC AGGCAAGGCG GTAAAATCCA TGACCCAAAG TCATGATATG
GCAGAAACCA GTGTGGCCGA TGCTAACTCA GCCAGCGAAA GCCTGCTGCA GATCAGTAAA
GCCATTAATG AAATTTCGGA TATGGCAAGC CAAATCGCTA CGGCCGCAGA GGAGCAAACC
TCTGTCACCA GCGAAATTAA CCGTAATACC GAGTCAATTC GTGAAGTTTC TGAAAATCTC
TCTATTGAGG CCCAAAGCGC GATGGTGCAG TCACAGGAGC TTGCTCACTT AGCCGCCTCG
CTTCAACAGG AAGTCTCACG TTTTAAACTA TAA
 
Protein sequence
MRSTLKTRLL FSSLFAVFIT VAVLVSISSY VIRNHAIDNT QGEIDQLANT FAEGIGLWMQ 
DRKTAITSLK KTVEADPNVQ ITPYLLQAHN AMGFALTYFG DEQGNMYRQD PALNTANYDP
RERPWYMDAK AANAMVMTAP YVSATLKKQV VTIAEPVMVS GRLFGVAAAN LTIDQLTDAV
QRLEVPGKGY TLMVDTAGLI ISHPNTQLNN QQLTKIDSHF TPSWLSQRAN ANTMEERELD
GGTQLVYVAA VPSTDWALIF VMNKQEIMSQ ATSLAWWMSA VGVGLLVIFG LVLVAIFKMQ
FKDLERVALA LNDIAEGDGD LTVRIHTANS HDEIGILASG FNRFVERLHG MISRMHNIAG
QLEYQAKGSS ASAADNSQRI EVQQDEVTMV ATAVTEMASA TEEIASNAEH TAQTAQNAVS
LSNHGQKQVM QSQQSIRNLA NEVDTAGRII SELNEHSQKI NSILLTISGI AEQTNLLALN
AAIEAARAGE QGRGFAVVAD EVRVLSQRTH SSTQEIQAMI ETLQQTAGKA VKSMTQSHDM
AETSVADANS ASESLLQISK AINEISDMAS QIATAAEEQT SVTSEINRNT ESIREVSENL
SIEAQSAMVQ SQELAHLAAS LQQEVSRFKL