Gene SO_1056 details

Gene Information

• Locus tag: SO_1056
• ID: 1168895
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 1094947
• End bp: 1096839
• Gene Length: 1893 bp
• Protein Length: 630 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637343014
• Product: methyl-accepting chemotaxis protein
• Protein accession: NP_716683
• Protein GI: 24372641
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTTCAA CACTTAAAAC TCGCCTACTT TTTAGTAGTC TCTTTGCTGT ATTCATTACC 
GTCGCAGTGC TGGTAAGTAT TTCAAGTTAT GTCATTAGAA ATCATGCAAT AGATAATACC 
CAAGGTGAGA TCGATCAACT CGCTAACACC TTTGCAGAAG GTATTGGTCT GTGGATGCAA 
GATAGAAAAA CAGCCATCAC TAGCCTTAAA AAGACTGTTG AAGCTGATCC CAATGTGCAA 
ATTACCCCTT ATTTATTACA GGCCCACAAT GCGATGGGAT TTGCACTCAC GTATTTTGGT 
GACGAGCAAG GCAACATGTA CCGCCAAGAC CCCGCGCTCA ATACCGCAAA CTATGACCCA 
CGCGAACGCC CTTGGTATAT GGATGCTAAA GCTGCCAATG CCATGGTAAT GACGGCCCCC 
TATGTTAGCG CCACGCTTAA AAAACAAGTT GTCACTATCG CAGAGCCCGT GATGGTCTCT 
GGTCGACTCT TCGGCGTAGC CGCCGCAAAC CTGACCATAG ATCAACTCAC CGATGCGGTG 
CAACGACTCG AAGTGCCAGG CAAGGGCTAC ACTCTGATGG TAGACACCGC AGGACTTATC 
ATTAGCCACC CCAACACTCA GCTCAATAAC CAACAACTTA CCAAAATTGA TAGTCATTTC 
ACCCCCAGTT GGCTATCCCA GCGCGCCAAC GCCAATACCA TGGAAGAGCG CGAGCTAGAT 
GGTGGGACTC AATTAGTCTA TGTAGCGGCC GTCCCCTCCA CTGATTGGGC ATTAATATTT 
GTGATGAATA AGCAAGAAAT CATGTCACAA GCCACATCGC TTGCTTGGTG GATGTCAGCC 
GTGGGCGTGG GCTTACTGGT AATATTTGGC TTGGTCTTAG TCGCAATTTT CAAAATGCAA 
TTTAAAGACT TAGAGCGCGT AGCTTTAGCA CTCAACGATA TAGCCGAAGG AGATGGCGAT 
CTGACCGTTA GAATCCATAC CGCAAACAGC CATGATGAAA TTGGCATCTT GGCTTCAGGT 
TTTAACCGCT TTGTTGAACG CCTGCATGGC ATGATTTCAA GAATGCACAA TATTGCGGGC 
CAACTTGAAT ATCAAGCCAA GGGCAGCAGT GCTTCTGCAG CAGATAATAG TCAACGCATT 
GAGGTTCAAC AGGATGAAGT GACCATGGTT GCAACCGCCG TTACCGAAAT GGCCAGCGCC 
ACCGAAGAGA TTGCCAGCAA TGCTGAGCAT ACCGCACAAA CAGCGCAAAA TGCCGTAAGC 
CTTTCAAATC ATGGCCAAAA ACAAGTGATG CAAAGTCAGC AATCTATTCG TAACTTAGCG 
AATGAGGTCG ATACCGCAGG GCGTATTATC AGTGAGCTGA ATGAACACTC ACAAAAAATT 
AATAGCATTC TATTAACGAT CAGTGGGATT GCAGAGCAAA CTAACTTACT GGCGTTAAAC 
GCTGCCATTG AAGCCGCACG TGCGGGTGAA CAAGGTCGCG GTTTCGCTGT CGTTGCCGAT 
GAAGTTCGCG TATTATCACA ACGAACCCAT TCTTCAACCC AAGAAATTCA AGCCATGATT 
GAAACCTTGC AACAAACGGC AGGCAAGGCG GTAAAATCCA TGACCCAAAG TCATGATATG 
GCAGAAACCA GTGTGGCCGA TGCTAACTCA GCCAGCGAAA GCCTGCTGCA GATCAGTAAA 
GCCATTAATG AAATTTCGGA TATGGCAAGC CAAATCGCTA CGGCCGCAGA GGAGCAAACC 
TCTGTCACCA GCGAAATTAA CCGTAATACC GAGTCAATTC GTGAAGTTTC TGAAAATCTC 
TCTATTGAGG CCCAAAGCGC GATGGTGCAG TCACAGGAGC TTGCTCACTT AGCCGCCTCG 
CTTCAACAGG AAGTCTCACG TTTTAAACTA TAA 

 

Protein sequence

MRSTLKTRLL FSSLFAVFIT VAVLVSISSY VIRNHAIDNT QGEIDQLANT FAEGIGLWMQ 
DRKTAITSLK KTVEADPNVQ ITPYLLQAHN AMGFALTYFG DEQGNMYRQD PALNTANYDP 
RERPWYMDAK AANAMVMTAP YVSATLKKQV VTIAEPVMVS GRLFGVAAAN LTIDQLTDAV 
QRLEVPGKGY TLMVDTAGLI ISHPNTQLNN QQLTKIDSHF TPSWLSQRAN ANTMEERELD 
GGTQLVYVAA VPSTDWALIF VMNKQEIMSQ ATSLAWWMSA VGVGLLVIFG LVLVAIFKMQ 
FKDLERVALA LNDIAEGDGD LTVRIHTANS HDEIGILASG FNRFVERLHG MISRMHNIAG 
QLEYQAKGSS ASAADNSQRI EVQQDEVTMV ATAVTEMASA TEEIASNAEH TAQTAQNAVS 
LSNHGQKQVM QSQQSIRNLA NEVDTAGRII SELNEHSQKI NSILLTISGI AEQTNLLALN 
AAIEAARAGE QGRGFAVVAD EVRVLSQRTH SSTQEIQAMI ETLQQTAGKA VKSMTQSHDM 
AETSVADANS ASESLLQISK AINEISDMAS QIATAAEEQT SVTSEINRNT ESIREVSENL 
SIEAQSAMVQ SQELAHLAAS LQQEVSRFKL