Gene SO_4557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4557 
Symbol 
ID1172143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4753426 
End bp4755297 
Gene Length1872 bp 
Protein Length623 aa 
Translation table11 
GC content50% 
IMG OID637346269 
Productmethyl-accepting chemotaxis protein 
Protein accessionNP_720074 
Protein GI24376031 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCAT ACTCGCTTAA ACAAAAGATC CTGATTTCGG TCGTGATTGC GCTTTCCCTC 
GTGATTGGCT TGCTCTCATG GCAAAGCTAT TCCAGCCAAA AGTCATTGTT GCTGCAAAAT
AGTTTAGAAC AGGTGCAGCG ACTGGGCGAT CAACAGGCTG AACGCATTCA AGAATGGCTC
GCTGGACGTC AGGATATTGT GGGGGCGTTG GCATCTAAGG TTGAAGGTGA CAGTTTAAAC
GCATTACAGC AGGCACAGGC TTCGGGCCGA TTTCAGCTTA CTTACTACGG TACGCAAGCG
GGGCAGATGC TGGACTCCGA CCTCAGCATA GATCGTACAG GTTACGATCC GAGAACTCGC
CCTTGGTATA AGCAAGCGAC AAATGAGCGT GGGCTTATCC TGACTAAGCC CTATGTCGAT
GTGGCATACA ATGTGTTAGT GGTTACTATG GCGCAGGCGG TTTCCCAAGG TGTGGTTGGG
GGCGATCTGT CGATTGCGAG TTTGGTAGAA AGCGTCAATC GTATGACCTT ACCAGCCAAT
GGTTACGCCA TTATGATGCA CCAAGATGGC ACTGTGATCG CTTACAAAGA TACCTCTAAA
GCGATGAAGC CTGTAAGCGA TATCGACAAC GACCTTAACC ATAATTTACC CCAACAGAGC
CGTCAGGCGG GCACATGGCT GCCGATGTAT TTCGAACATG AAAGCCGCGA TAAGTTAGTT
TGGGGTGTCG ATATTCCCAA TACCGATTGG GAACTGGTGA TAGTGCTGGA CAAAGAGACT
CTTGAGGCGC CATTAACCAA TTTACTGCTG ACTCAATTGG GTCTTTCAGC CGTGGTGTTA
TTGCTGAGCG TATTGGCTAT TTCTTGGTTG GTGAATCTAT TATTGGGGCC ATTAGGACGC
GTATCGCAGG CGCTTGCGCG CATTGCCGAT GGTAACGGTG ACTTAACCCA ACGTATTGAG
GTCGATACTC AAGATGAAGT GGGCGTACTG GCCGATAGCT TTAACCGTTT TGTTGGCAGT
CAGCATCAGC TCATCAGTCA TATTCGCCAT TTGGCCGGTG AGCTGGATGC GGATGCTGAG
CACAGTCTTA AAACCAACCA TCTTGCCGTG GCCGAATTAC AACGTCAGCA GCAGGAAGTC
GCTATGGTCG CGACTGCGGT GACTGAAATG GCGAGCGCGA CTAATGAAAT TGCCGCCAAT
GCCGAAAATA CCGCAACTGC GGCACAGCAA TCAGCAGCGA GCAGCTTCCA AGGGAAAGAG
TTAGTTAATA AAACCCGTAG TTCAATTAAT TCCTTGGCGG ATGAAGTGAC TCAAGCGACT
GAGGTCATTG AAGATTTAAG CCGTCATGCC CAGTCTATTT CCAGCATTTT GGCCACAATT
CAAGGCATTG CAGAGCAGAC TAACCTGTTA GCCCTCAATG CGGCAATTGA GGCTGCCCGT
GCTGGCGAGC AGGGGCGTGG TTTTGCGGTT GTGGCAGATG AGGTACGAGT GCTATCGCGC
CGTACCCAAG ATTCGACCCA AGAAGTGCAT GCAACCATTG AGACATTGCA ACGAACAACG
GCGAAGGCTG TTAGCTTGAT GGAAAGTAGT CAAATGTTGG CGGGCAATAG CGTTGAAGAT
GCCAATGCAG CGGTCAAGGC ACTGGAAGAA ATCACTCAAG CCGTGAATGT GATTTCGGAT
ATGGCGGGTC AAATTGCCAC CGCCGCCGAG GAGCAAACTC AAGTGACAGG TGAAATCACC
CAAAATACGG TGGCGATTAA GGATGTGACC GACGAAATCA CCGAGGCGGC GAAGTCGGAT
CTCACTCAAG CTCAGGCATT AAAGGCGCGC GCCAATGATC TCAATGCTCA GGTAGCGACG
TTTATTCTGT AA
 
Protein sequence
MNSYSLKQKI LISVVIALSL VIGLLSWQSY SSQKSLLLQN SLEQVQRLGD QQAERIQEWL 
AGRQDIVGAL ASKVEGDSLN ALQQAQASGR FQLTYYGTQA GQMLDSDLSI DRTGYDPRTR
PWYKQATNER GLILTKPYVD VAYNVLVVTM AQAVSQGVVG GDLSIASLVE SVNRMTLPAN
GYAIMMHQDG TVIAYKDTSK AMKPVSDIDN DLNHNLPQQS RQAGTWLPMY FEHESRDKLV
WGVDIPNTDW ELVIVLDKET LEAPLTNLLL TQLGLSAVVL LLSVLAISWL VNLLLGPLGR
VSQALARIAD GNGDLTQRIE VDTQDEVGVL ADSFNRFVGS QHQLISHIRH LAGELDADAE
HSLKTNHLAV AELQRQQQEV AMVATAVTEM ASATNEIAAN AENTATAAQQ SAASSFQGKE
LVNKTRSSIN SLADEVTQAT EVIEDLSRHA QSISSILATI QGIAEQTNLL ALNAAIEAAR
AGEQGRGFAV VADEVRVLSR RTQDSTQEVH ATIETLQRTT AKAVSLMESS QMLAGNSVED
ANAAVKALEE ITQAVNVISD MAGQIATAAE EQTQVTGEIT QNTVAIKDVT DEITEAAKSD
LTQAQALKAR ANDLNAQVAT FIL