More than 300 homologs were found in PanDaTox collection
for query gene SO_4557 on replicon NC_004347
Organism: Shewanella oneidensis MR-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011663  Sbal223_0194  methyl-accepting chemotaxis sensory transducer with Cache sensor  88.6 
 
 
623 aa  1051    Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_4141  methyl-accepting chemotaxis sensory transducer  88.44 
 
 
623 aa  1048    Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4557  methyl-accepting chemotaxis protein  100 
 
 
623 aa  1249    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_0194  methyl-accepting chemotaxis sensory transducer  79.78 
 
 
623 aa  960    Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0252  methyl-accepting chemotaxis sensory transducer with Cache sensor  72.87 
 
 
623 aa  887    Shewanella woodyi ATCC 51908  Bacteria  normal  0.866394  normal 
 
 
-
 
NC_009438  Sputcn32_0323  methyl-accepting chemotaxis sensory transducer  88.44 
 
 
623 aa  1051    Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0193  methyl-accepting chemotaxis sensory transducer  87.8 
 
 
623 aa  1041    Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3950  methyl-accepting chemotaxis sensory transducer  95.67 
 
 
623 aa  1155    Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3752  methyl-accepting chemotaxis sensory transducer  95.51 
 
 
623 aa  1153    Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_4274  methyl-accepting chemotaxis sensory transducer with Cache sensor  88.6 
 
 
623 aa  1051    Shewanella baltica OS195  Bacteria  normal  normal  0.179842 
 
 
-
 
NC_009901  Spea_1629  methyl-accepting chemotaxis sensory transducer with Cache sensor  76.73 
 
 
623 aa  931    Shewanella pealeana ATCC 700345  Bacteria  normal  0.438395  n/a   
 
 
-
 
NC_008322  Shewmr7_3825  methyl-accepting chemotaxis sensory transducer  95.35 
 
 
623 aa  1152    Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  45.18 
 
 
628 aa  455  1e-127  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  43.49 
 
 
639 aa  457  1e-127  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01884  hypothetical protein  42.65 
 
 
627 aa  452  1.0000000000000001e-126  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  41.64 
 
 
630 aa  448  1.0000000000000001e-124  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  42.56 
 
 
630 aa  439  9.999999999999999e-123  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  42.72 
 
 
630 aa  441  9.999999999999999e-123  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.56 
 
 
630 aa  439  9.999999999999999e-123  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_003139  methyl-accepting chemotaxis protein  42.81 
 
 
627 aa  441  9.999999999999999e-123  Vibrio sp. Ex25  Bacteria  normal  0.116124  n/a   
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  41.81 
 
 
630 aa  437  1e-121  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  42.56 
 
 
630 aa  438  1e-121  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  41.65 
 
 
630 aa  437  1e-121  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  41.81 
 
 
630 aa  437  1e-121  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_011313  VSAL_II1022  methyl-accepting chemotaxis protein  43.85 
 
 
628 aa  438  1e-121  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.771007  n/a   
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  43.6 
 
 
628 aa  434  1e-120  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  41.18 
 
 
630 aa  429  1e-119  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  41.52 
 
 
633 aa  422  1e-117  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_009438  Sputcn32_3017  methyl-accepting chemotaxis sensory transducer  41.27 
 
 
630 aa  416  9.999999999999999e-116  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  41.39 
 
 
631 aa  407  1.0000000000000001e-112  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011312  VSAL_I0799  methyl-accepting chemotaxis protein  41.24 
 
 
624 aa  404  1e-111  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1383  methyl-accepting chemotaxis sensory transducer  37.24 
 
 
636 aa  400  9.999999999999999e-111  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00353653  normal  0.775857 
 
 
-
 
NC_009783  VIBHAR_00119  methyl-accepting chemotaxis protein  38.81 
 
 
626 aa  357  3.9999999999999996e-97  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.06 
 
 
626 aa  338  1.9999999999999998e-91  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.52 
 
 
626 aa  335  1e-90  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0712  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.12 
 
 
627 aa  328  2.0000000000000001e-88  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0412159  hitchhiker  0.0000400753 
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  33.81 
 
 
629 aa  315  1.9999999999999998e-84  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  34.01 
 
 
629 aa  311  2e-83  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  33.33 
 
 
629 aa  306  8.000000000000001e-82  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  33.33 
 
 
629 aa  304  3.0000000000000004e-81  Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
625 aa  303  5.000000000000001e-81  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  31.61 
 
 
626 aa  298  1e-79  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  33.6 
 
 
643 aa  295  2e-78  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  33.6 
 
 
628 aa  295  2e-78  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  34.07 
 
 
626 aa  295  2e-78  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_004578  PSPTO_2480  methyl-accepting chemotaxis protein  32.66 
 
 
629 aa  293  5e-78  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.75 
 
 
628 aa  293  8e-78  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  32.21 
 
 
623 aa  291  3e-77  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A1741  methyl-accepting chemotaxis protein  34.37 
 
 
623 aa  291  3e-77  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0425  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.67 
 
 
630 aa  289  1e-76  Pseudomonas putida W619  Bacteria  normal  0.461628  normal 
 
 
-
 
NC_007005  Psyr_2246  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  32.81 
 
 
629 aa  288  2e-76  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.265681  normal  0.412954 
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  31.92 
 
 
632 aa  288  2.9999999999999996e-76  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_009456  VC0395_0316  methyl-accepting chemotaxis protein  35.66 
 
 
652 aa  287  4e-76  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  32.66 
 
 
632 aa  287  5e-76  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_009831  Ssed_3477  putative methyl-accepting chemotaxis protein  33.39 
 
 
622 aa  286  5.999999999999999e-76  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000522984 
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.96 
 
 
626 aa  286  7e-76  Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_010501  PputW619_1011  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.06 
 
 
624 aa  285  2.0000000000000002e-75  Pseudomonas putida W619  Bacteria  normal  0.752503  hitchhiker  0.0000000000251926 
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  31.62 
 
 
623 aa  280  5e-74  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  32.72 
 
 
630 aa  280  7e-74  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4431  chemotaxis sensory transducer, Cache sensor  32.25 
 
 
629 aa  280  7e-74  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1061  methyl-accepting chemotaxis protein  33.73 
 
 
626 aa  279  9e-74  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.646209  n/a   
 
 
-
 
NC_007005  Psyr_0906  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  34.01 
 
 
626 aa  277  3e-73  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  34.09 
 
 
627 aa  277  5e-73  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_007005  Psyr_3534  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  32.23 
 
 
629 aa  275  1.0000000000000001e-72  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.667463  normal  0.0882884 
 
 
-
 
NC_009052  Sbal_2364  methyl-accepting chemotaxis sensory transducer  35.2 
 
 
622 aa  273  5.000000000000001e-72  Shewanella baltica OS155  Bacteria  normal  0.493821  n/a   
 
 
-
 
NC_009438  Sputcn32_2121  methyl-accepting chemotaxis sensory transducer  34.82 
 
 
622 aa  269  1e-70  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_1371  methyl-accepting chemotaxis transducer  31.54 
 
 
624 aa  267  2.9999999999999995e-70  Pseudomonas putida KT2440  Bacteria  normal  normal  0.318672 
 
 
-
 
NC_009512  Pput_4352  methyl-accepting chemotaxis sensory transducer  31.37 
 
 
624 aa  267  4e-70  Pseudomonas putida F1  Bacteria  normal  normal  0.0132701 
 
 
-
 
NC_012918  GM21_0525  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.08 
 
 
632 aa  266  1e-69  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010322  PputGB1_4443  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.22 
 
 
624 aa  265  2e-69  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.0000033578 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  35.96 
 
 
713 aa  258  2e-67  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_009831  Ssed_4216  methyl-accepting chemotaxis sensory transducer  29.51 
 
 
647 aa  256  1.0000000000000001e-66  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0657  chemotaxis sensory transducer, Cache sensor  33.85 
 
 
648 aa  254  2.0000000000000002e-66  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.511779  normal 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  36.83 
 
 
712 aa  253  1e-65  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_009092  Shew_0237  methyl-accepting chemotaxis sensory transducer  30.15 
 
 
632 aa  251  4e-65  Shewanella loihica PV-4  Bacteria  normal  normal  0.997473 
 
 
-
 
NC_009665  Shew185_2544  methyl-accepting chemotaxis sensory transducer  29.8 
 
 
633 aa  250  7e-65  Shewanella baltica OS185  Bacteria  hitchhiker  0.00517521  n/a   
 
 
-
 
NC_010501  PputW619_4580  methyl-accepting chemotaxis sensory transducer  33.27 
 
 
648 aa  250  7e-65  Pseudomonas putida W619  Bacteria  normal  normal  0.0108713 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  36.08 
 
 
712 aa  246  6e-64  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  35.02 
 
 
645 aa  246  6.999999999999999e-64  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4382  chemotaxis sensory transducer  35.08 
 
 
738 aa  246  9e-64  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.218372 
 
 
-
 
NC_008577  Shewana3_0948  methyl-accepting chemotaxis sensory transducer  30.66 
 
 
667 aa  245  1.9999999999999999e-63  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_0950  methyl-accepting chemotaxis sensory transducer  34.57 
 
 
667 aa  245  1.9999999999999999e-63  Shewanella putrefaciens CN-32  Bacteria  normal  0.231949  n/a   
 
 
-
 
NC_008322  Shewmr7_0984  methyl-accepting chemotaxis sensory transducer  30.66 
 
 
667 aa  245  1.9999999999999999e-63  Shewanella sp. MR-7  Bacteria  normal  normal  0.869835 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  40.8 
 
 
638 aa  243  5e-63  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_004578  PSPTO_2448  methyl-accepting chemotaxis protein  33.39 
 
 
646 aa  243  6e-63  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.718596  n/a   
 
 
-
 
NC_009654  Mmwyl1_0130  methyl-accepting chemotaxis sensory transducer  32.79 
 
 
671 aa  243  9e-63  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2220  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  33.03 
 
 
646 aa  242  1e-62  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.071358  normal  0.520396 
 
 
-
 
NC_008321  Shewmr4_0946  methyl-accepting chemotaxis sensory transducer  29.49 
 
 
667 aa  241  4e-62  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  31.47 
 
 
636 aa  241  4e-62  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_0584  methyl-accepting chemotaxis transducer  34 
 
 
647 aa  240  6.999999999999999e-62  Pseudomonas putida KT2440  Bacteria  normal  0.77697  normal  0.644217 
 
 
-
 
NC_009512  Pput_0623  methyl-accepting chemotaxis sensory transducer  34 
 
 
647 aa  239  1e-61  Pseudomonas putida F1  Bacteria  normal  0.494937  normal 
 
 
-
 
NC_008700  Sama_2528  putative methyl-accepting chemotaxis sensory transducer  31.23 
 
 
665 aa  238  2e-61  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  36.97 
 
 
716 aa  238  3e-61  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_007908  Rfer_3449  methyl-accepting chemotaxis sensory transducer  29.79 
 
 
632 aa  238  3e-61  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_2833  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.78 
 
 
595 aa  236  9e-61  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A1452  methyl-accepting chemotaxis protein  29.78 
 
 
595 aa  236  9e-61  Yersinia pestis Angola  Bacteria  normal  0.19796  normal  0.220045 
 
 
-
 
NC_013421  Pecwa_3307  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.71 
 
 
596 aa  236  1.0000000000000001e-60  Pectobacterium wasabiae WPP163  Bacteria  normal  0.298951  n/a   
 
 
-
 
NC_007651  BTH_I3209  methyl-accepting chemotaxis protein, putative  31.86 
 
 
601 aa  235  1.0000000000000001e-60  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_2753  methyl-accepting chemotaxis protein  29.78 
 
 
595 aa  235  2.0000000000000002e-60  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0257893  n/a   
 
 
-
 
NC_011992  Dtpsy_2088  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.08 
 
 
617 aa  234  3e-60  Acidovorax ebreus TPSY  Bacteria  normal  0.258516  n/a   
 
 
-
 
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