Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_56010 |
Symbol | pctB |
ID | 4382589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5000826 |
End bp | 5002715 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639327102 |
Product | chemotactic transducer PctB |
Protein accession | YP_792655 |
Protein GI | 116052344 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAAA GTCTCAAGTT CAGTCACAAG ATCCTGCTCG CCGCCGCGCT GGTGGTGATC GCGACCTTCT CCCTCTTCAC CCTCTACAAC GACTCCCTGC AGCGCACCTC GATCCGCGAG GACCTGGAGG ACTACCTGCA CGAAATGGGC GAGATCACCG CCAGCAACGT GCAGAACTGG CTGAGCGGGC GCATCCTGCT GATCGAGAAC CTGGCCCAGA CCCTGGCCCG CGACCACAGC CCGGAGACCA CCCAGGCCCT GCTGGAACAG CCGCTGCTGG GCTCGACCTT CCTCTTCACC TACCTGGGGC AGACCGACGG CACCTACACC GCGCGCCCCA CCAGCGACCT GCCGGCCGAC TACGACCCGC GCCGCCGCCC CTGGTACAAC GCCGCCACCA GCGCCGGCCA GACCACCCTC ACCGAACCCT ACATGGAGCC GGCCATCCAC GAGCTGGTAC TGACCATCGC CAGCCCGGCG CGCCAGGGCG GCCAGCCGTT CGGCGTGGTC GGCGGCGACC TCAGCCTGCA GACGGTGGTG AAGATCATCA ACTCGCTGGA CTTCGGCGGC ATGGGCTACG CCTTCCTGGT CAGCGGCGAC GGCAAGATCC TCGTCCATCC GGACAAGGAC CAGGTCATGA AGAGCCTCAG CGACGTCTAC CCACGCAACA CGCCGAAGAT CGGCAGCGGC TTCAGCGAGG CCGAGCTGCA CGGCAACACC CGGATCCTCA GTTTCTCTCC GGTCAAGGGC CTGTCCGGCC TGGACTGGTA CATCGGCATC TCGGTGGACA AGGACAAGGC CTATGCCATG CTCACCAAGC TGCGTACCTC GGCGATCGTC GCCGCGCTGA TCGCGGTGGT CGCCATCGTC CTCCTCCTCG GCATGCTGAT CCGCGTGCTG ATGCAACCGC TCACCGACAT GGGCCGCGCC ATGCAGGACA TCGCCCAGGG CGAAGGCGAC CTGACCAAGC GCCTGAAGGT CACCAGCAAC GATGAATTCG GGGTCCTGGC CATTTCCTTC AACCGCTTCG TCGAGCGTAT CCACGAATCG ATCCGCGAGG TCGCCGGCAC CGCCCGTCAA CTGCACGACG TGGCGCAACT GGTGGTGAAC GCCTCGAACT CTTCGATGGC CAACTCCGAC GAGCAGTCCA ACCGCACCAA CAGCGTCGCC GCGGCGATCA ACGAACTCGG CGCCGCCGCC CAGGAAATCG CCCGCAACGC CGCCGATGCC TCGCACCACG CATCCGACGC CAACCACCAG GCCGAGGACG GCAAGCAGGT GGTCGAGCAG ACCATCCGCG CGATGAACGA GCTTTCCGAG AAGATCAGCG CCTCCTGCGC CAACATCGAG GCCCTCAACA GCCGCACGGT GAACATCGGC CAGATCCTCG AAGTGATCAA GGGCATCTCC GAGCAGACCA ACCTGCTCGC CCTCAACGCC GCCATCGAAG CCGCCCGCGC CGGCGAGGCC GGACGCGGCT TCGCGGTGGT CGCCGACGAG GTGCGCAACC TGGCCCACCG CGCCCAGGAG TCGGCCCAGC AGATCCAGAA GATGATCGAG GAACTGCAGA TCGGCGCCCA GGAAGCGGTC AGCACCATGA CCGAAAGCCA GCGCTACAGC CTGGAGAGCG TGGAGATCGC CAACCGTGCC GGCGAACGCC TGAGCAGTGT CACCGGACGG ATCGCCGAGA TCGACGGAAT GAACCAGTCG GTGGCCACTG CCACCGAGGA GCAGACCGCG GTGGTCGATT CGCTGAACAT GGACATCACC GAGATCAACA CCCTCAACCA GGAAGGCGTG GAGAACCTCC AGGCCACCCT GCGCGCCTGC GGCGAGCTGG AAACCCAGGC CGGGCGCCTG CGCCAGCTGG TGGACAGCTT CAAGATCTAA
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Protein sequence | MIKSLKFSHK ILLAAALVVI ATFSLFTLYN DSLQRTSIRE DLEDYLHEMG EITASNVQNW LSGRILLIEN LAQTLARDHS PETTQALLEQ PLLGSTFLFT YLGQTDGTYT ARPTSDLPAD YDPRRRPWYN AATSAGQTTL TEPYMEPAIH ELVLTIASPA RQGGQPFGVV GGDLSLQTVV KIINSLDFGG MGYAFLVSGD GKILVHPDKD QVMKSLSDVY PRNTPKIGSG FSEAELHGNT RILSFSPVKG LSGLDWYIGI SVDKDKAYAM LTKLRTSAIV AALIAVVAIV LLLGMLIRVL MQPLTDMGRA MQDIAQGEGD LTKRLKVTSN DEFGVLAISF NRFVERIHES IREVAGTARQ LHDVAQLVVN ASNSSMANSD EQSNRTNSVA AAINELGAAA QEIARNAADA SHHASDANHQ AEDGKQVVEQ TIRAMNELSE KISASCANIE ALNSRTVNIG QILEVIKGIS EQTNLLALNA AIEAARAGEA GRGFAVVADE VRNLAHRAQE SAQQIQKMIE ELQIGAQEAV STMTESQRYS LESVEIANRA GERLSSVTGR IAEIDGMNQS VATATEEQTA VVDSLNMDIT EINTLNQEGV ENLQATLRAC GELETQAGRL RQLVDSFKI
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