Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_4874 |
Symbol | pctC |
ID | 5356023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 5025693 |
End bp | 5027591 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640813920 |
Product | chemotactic transducer PctC |
Protein accession | YP_001350210 |
Protein GI | 152984093 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.153332 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCGCT CGCTGTCGTT TGCCAAGAAA ATCCTTCTCG CCGCCGCGCT GGTGGTGGTC TTCGCCTTCA CCTGCTTCAT CCTCTACAAC GATTACCGGC AGCGCGAGGC GGTGCGCACG GACACGGAAA ACTACCTCGG GGAAATCGGC ACCCTGACCG CCAGCAACAT CCAGAGCTGG CTGGAAGGCC GCATGCACCT GGTGCAAGGA CTGGCCTCGC AGCTCGCGCT GCTCGAGCAG CCCGACGAGG CGGGCATCGC GCGACAGCTG GAACAGTCGG TGTTCAGCAG CAACTTCGCC TCGGTCTACC TCGGCGAGGC AGCCACCGGG GCGTTCACCA TGCGTCCCTA CGATGCCATG CCGGCAGGCT ACGATCCGCG TACCCGTGCC TGGTACAAGG AAGCGCTGGC AGCCGACCGG CTGATCGTCA CCGAGCCCTT CGTCGATGCC GGCACCGGCG AGCAGATCCT CGCCATGTCG CTGCCGGTGC GGCACAACGG CCAACTGCTG GGCGTCGCCG CCGGCGACAT GAAGCTGGAA ACCCTGACCG CGATCCTCAA CTCGCTGAAG TTCGACGGCG CCGGCTATGC CTTCCTGGTC AGCGACGCCG GCAGGATCCT CCTCCACCCC GACTCCGGGC TGGTCCTGAA GAGCCTCGCC GAAGCCTATC CCAAGGGCGC ACCGGCAATC GCCCCCGGAG TCCATGAAGT GGAGCTCGAC GGCCGCAGCC AGTTCGTTTC CTTCACTCCG GTGAAGGGAC TGCCCGGCGT GACCTGGTAT GTCGCCCTGG TTCTCGACCG CGACACCGCC TATTCGATGC TCAGCGAGTT CCGCACGTCG GCGATCGTCG CCACGCTGAT CGCGGTGGTC GGCATCATGT TCCTCCTCGG CATGCTGATC CGCGTGCTGA TGCAGCCGCT CACCGACATG GGCCGCGCCA TGCAGGACAT CGCCCAGGGC GAGGGCGACC TGACCAAGCG CCTGAAGGTC ACCAGCAACG ATGAATTCGG CGCCCTGGCG ATCGCCTTCA ACCGTTTCGT CGAGCGCATC CACGAGTCGA TCCGCGAGGT CGCCGGCACC GCCCGCCAGT TGCACGACGT GGCGCAACTG GTGGTCAACG CCTCGAACTC GTCGATGGCC AATTCCGACG AGCAGTCCAA CCGCACCAAC AGCGTCGCCG CCGCGATCAA CGAACTCGGC GCCGCCGCCC AGGAAATCGC CCGCAACGCC GCCGACGCCT CGCACCATGC TTCCGACGCC AACCATCAGG CCGAGGACGG CAAGCAGGTG GTCGAGCAGA CCATCCGCGC GATGAACGAG CTGTCCGAGA AGATCAGCGC TTCCTGCGCC AACATCGAGG CGCTGAACAG CCGCACGGTG AACATCGGGC AGATCCTCGA GGTGATCAAG GGCATCTCCG AGCAGACCAA CCTGCTCGCC CTCAACGCCG CCATCGAGGC CGCCCGCGCC GGCGAGGCCG GGCGCGGCTT CGCGGTGGTC GCCGACGAGG TGCGCAACCT CGCGCACCGC GCCCAGGAGT CGGCGCAGCA GATCCAGAAG ATGATCGAGG AACTGCAGGT CGGCGCCCGC GAAGCGGTGG CCACCATGAC CGAGAGCCAG CGCTACAGCC TGGAGAGCGT GGAGATCGCC AACCGCGCCG GCGAACGCCT GGGCAGCGTG ACCAGCCGGA TCGGCGAGAT CGACAGCATG AACCAGTCGG TGGCCACCGC CACCGAGGAA CAGACCGCCG TGGTCGACTC GCTGAACATG GACATCACCG AGATCAACAC CCTCAACCAG GAAGGCGTGG AGAACCTCCA GGCCACCCTG CGCGCCTGCG GCGAGCTGGA GGCCCAGGCC GGGCGCCTGC GGCACCTGGT GGACAGTTTC AAGATCTGA
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Protein sequence | MLRSLSFAKK ILLAAALVVV FAFTCFILYN DYRQREAVRT DTENYLGEIG TLTASNIQSW LEGRMHLVQG LASQLALLEQ PDEAGIARQL EQSVFSSNFA SVYLGEAATG AFTMRPYDAM PAGYDPRTRA WYKEALAADR LIVTEPFVDA GTGEQILAMS LPVRHNGQLL GVAAGDMKLE TLTAILNSLK FDGAGYAFLV SDAGRILLHP DSGLVLKSLA EAYPKGAPAI APGVHEVELD GRSQFVSFTP VKGLPGVTWY VALVLDRDTA YSMLSEFRTS AIVATLIAVV GIMFLLGMLI RVLMQPLTDM GRAMQDIAQG EGDLTKRLKV TSNDEFGALA IAFNRFVERI HESIREVAGT ARQLHDVAQL VVNASNSSMA NSDEQSNRTN SVAAAINELG AAAQEIARNA ADASHHASDA NHQAEDGKQV VEQTIRAMNE LSEKISASCA NIEALNSRTV NIGQILEVIK GISEQTNLLA LNAAIEAARA GEAGRGFAVV ADEVRNLAHR AQESAQQIQK MIEELQVGAR EAVATMTESQ RYSLESVEIA NRAGERLGSV TSRIGEIDSM NQSVATATEE QTAVVDSLNM DITEINTLNQ EGVENLQATL RACGELEAQA GRLRHLVDSF KI
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