Gene VIBHAR_01884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01884 
Symbol 
ID5553801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1897474 
End bp1899357 
Gene Length1884 bp 
Protein Length627 aa 
Translation table11 
GC content49% 
IMG OID640907372 
Producthypothetical protein 
Protein accessionYP_001445077 
Protein GI156974170 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAT CATTAAAACA AAAGCTAATT GGCGCAAGCC TATCTGCTGT TGTTGTGATG 
GCAACAGCAC TCACTTGGCT GTCAGCTGAT CAACTTTTTG ATCAGACGCG TTCAGGTGTC
TATTCACGAG CGCAAAGTCT TAGCAACGCC GCTTCAGAAG GTATTTCTGA TTGGGTATCG
ATTCGCAAAG ACATTGCTAA GGCTTTTAAC GATTACTCAA CAGAGAAAGA CGTTGTGCCT
TTCCTACAAC AAGCACGCAA AGCGGGGGGC TTTGACGATA TCTTCTTGGG CACACCTGAA
GGTGGCATGT ACCGTTCTCA CCCAGAACGT AACCGTGCAG ATTACGACCC ACGTACTCGC
CCTTGGTATA AAGACGCCAA TGCTGCAGGC AAGCAAATCA TCACTGAAGC GTATCAAGAC
GCGATCACAA ATGCATTGCT AGTGACTATC GCAGAACCTG TGATGAAAAA CGGTAAGTTC
ATTGGTGTTG TTGGTGCGGA CGTACTGATC GATCAGCTAA TTGACGACGT TATCAACCTA
GATGCTGGTG AAAACGCGCA TGCAATGCTG ATCGACATGA ACGATGGCAC TTTCCTTGCG
CACCCAAACA AAAGTTTAAC GCTTAAGCCA ATCACTGACC TTACTCAAGA GTTTTCGAAA
GGCTCTATTG AGCGTGCTGC AAATTCTGGA GCCATTGAAA CAGCAACGAT CAAAGGTCAA
GAGAAGCTTT TTTACTTTAG CAAAGTACCT GGTACAAACT GGATGTTCGC TATCGAGATG
GATCGCGCAA CGGAAGAAGC AAGCCACGCG CAACTTCTGC GTGAGATGGT TATTACCGCG
GTATTGATCA CTATTGTGGT GATTGTGGCC GTATCTTGGT TGGTAGGCTT CTTGTTCCGC
GATCTTGGCC GAGTATCACA AGCACTGGAA GAAATTGCTT CAGGTGAGGG GGACTTGACG
CAGCGTCTGG AACCTCGCAG TGATGATGAA GTGGGCAAAC TAGCCGATAA CTTCAACCGC
TTTGTAGGCA ACATGCACAC CATGGTGACC AAACTGAGTC ATGTCTCTTC AGCCTTGTCA
GAACAAGCGC GTACAACGGC ACAACAAGCT GAAGAGCGTA GTCAGCGTAT CTCTTACCAG
CAAGATGAAA TCAACATGGT TGCGACTGCC GTTAACGAGG TGGCGGCAGC GACGCAAGAG
ATTGCAGGTA ACGCAGATAA CACGGCATCA AGCTCTGAAG AAGCAGTACA AGCCTGTGTG
CATGGCTCTG GCCAAGTAAC GCAAACTCAA GGCTCTATCC AAAACCTAGC GCAAGAAGTG
CAAGTTGCGA CCAATGTTAT CCAAGAGCTG GAAGCACACG GTAACGCGAT CAACACCATT
CTTTCGACCA TCCAAGGCAT TGCAGAGCAA ACTAACCTGT TGGCACTGAA CGCGGCGATT
GAGGCGGCAC GTGCAGGTGA ACAAGGTCGT GGTTTTGCTG TCGTGGCGGA TGAGGTTCGT
GTATTGAGCC AACGTACTCA CGCATCAACG CAAGAGATCC AAGAGACAAT CGAAATGCTG
CAAGGCACAA CGGCGAAAGC GGTGGGTATC ATGGATGACA GTCGTCGTCT TGCTGACACT
AGTGTCGATG ATGCAAACTC GGCAGCGGTG AGCTTGACTC AAATCCACTC TGCGGTTGAG
CGTATTAGCG ACATGGCAAC GCAAATTGCG TCTGCGGCAG AAGAGCAAGC GTCTGTAACG
ACAGAAATCA CTCGCAACAC CGAAGGCATT CGTGACGTGT CTAACGAGCT TTCTGTTGAA
GCACACCAAG CAGCAGAGCA AGCGGCGCAT CTGTCTGAGC TTTCTCATGA GCTAGAGCAA
GAGATCAAAC GCTTTAAACT GTAA
 
Protein sequence
MKLSLKQKLI GASLSAVVVM ATALTWLSAD QLFDQTRSGV YSRAQSLSNA ASEGISDWVS 
IRKDIAKAFN DYSTEKDVVP FLQQARKAGG FDDIFLGTPE GGMYRSHPER NRADYDPRTR
PWYKDANAAG KQIITEAYQD AITNALLVTI AEPVMKNGKF IGVVGADVLI DQLIDDVINL
DAGENAHAML IDMNDGTFLA HPNKSLTLKP ITDLTQEFSK GSIERAANSG AIETATIKGQ
EKLFYFSKVP GTNWMFAIEM DRATEEASHA QLLREMVITA VLITIVVIVA VSWLVGFLFR
DLGRVSQALE EIASGEGDLT QRLEPRSDDE VGKLADNFNR FVGNMHTMVT KLSHVSSALS
EQARTTAQQA EERSQRISYQ QDEINMVATA VNEVAAATQE IAGNADNTAS SSEEAVQACV
HGSGQVTQTQ GSIQNLAQEV QVATNVIQEL EAHGNAINTI LSTIQGIAEQ TNLLALNAAI
EAARAGEQGR GFAVVADEVR VLSQRTHAST QEIQETIEML QGTTAKAVGI MDDSRRLADT
SVDDANSAAV SLTQIHSAVE RISDMATQIA SAAEEQASVT TEITRNTEGI RDVSNELSVE
AHQAAEQAAH LSELSHELEQ EIKRFKL