Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01884 |
Symbol | |
ID | 5553801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 1897474 |
End bp | 1899357 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640907372 |
Product | hypothetical protein |
Protein accession | YP_001445077 |
Protein GI | 156974170 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAT CATTAAAACA AAAGCTAATT GGCGCAAGCC TATCTGCTGT TGTTGTGATG GCAACAGCAC TCACTTGGCT GTCAGCTGAT CAACTTTTTG ATCAGACGCG TTCAGGTGTC TATTCACGAG CGCAAAGTCT TAGCAACGCC GCTTCAGAAG GTATTTCTGA TTGGGTATCG ATTCGCAAAG ACATTGCTAA GGCTTTTAAC GATTACTCAA CAGAGAAAGA CGTTGTGCCT TTCCTACAAC AAGCACGCAA AGCGGGGGGC TTTGACGATA TCTTCTTGGG CACACCTGAA GGTGGCATGT ACCGTTCTCA CCCAGAACGT AACCGTGCAG ATTACGACCC ACGTACTCGC CCTTGGTATA AAGACGCCAA TGCTGCAGGC AAGCAAATCA TCACTGAAGC GTATCAAGAC GCGATCACAA ATGCATTGCT AGTGACTATC GCAGAACCTG TGATGAAAAA CGGTAAGTTC ATTGGTGTTG TTGGTGCGGA CGTACTGATC GATCAGCTAA TTGACGACGT TATCAACCTA GATGCTGGTG AAAACGCGCA TGCAATGCTG ATCGACATGA ACGATGGCAC TTTCCTTGCG CACCCAAACA AAAGTTTAAC GCTTAAGCCA ATCACTGACC TTACTCAAGA GTTTTCGAAA GGCTCTATTG AGCGTGCTGC AAATTCTGGA GCCATTGAAA CAGCAACGAT CAAAGGTCAA GAGAAGCTTT TTTACTTTAG CAAAGTACCT GGTACAAACT GGATGTTCGC TATCGAGATG GATCGCGCAA CGGAAGAAGC AAGCCACGCG CAACTTCTGC GTGAGATGGT TATTACCGCG GTATTGATCA CTATTGTGGT GATTGTGGCC GTATCTTGGT TGGTAGGCTT CTTGTTCCGC GATCTTGGCC GAGTATCACA AGCACTGGAA GAAATTGCTT CAGGTGAGGG GGACTTGACG CAGCGTCTGG AACCTCGCAG TGATGATGAA GTGGGCAAAC TAGCCGATAA CTTCAACCGC TTTGTAGGCA ACATGCACAC CATGGTGACC AAACTGAGTC ATGTCTCTTC AGCCTTGTCA GAACAAGCGC GTACAACGGC ACAACAAGCT GAAGAGCGTA GTCAGCGTAT CTCTTACCAG CAAGATGAAA TCAACATGGT TGCGACTGCC GTTAACGAGG TGGCGGCAGC GACGCAAGAG ATTGCAGGTA ACGCAGATAA CACGGCATCA AGCTCTGAAG AAGCAGTACA AGCCTGTGTG CATGGCTCTG GCCAAGTAAC GCAAACTCAA GGCTCTATCC AAAACCTAGC GCAAGAAGTG CAAGTTGCGA CCAATGTTAT CCAAGAGCTG GAAGCACACG GTAACGCGAT CAACACCATT CTTTCGACCA TCCAAGGCAT TGCAGAGCAA ACTAACCTGT TGGCACTGAA CGCGGCGATT GAGGCGGCAC GTGCAGGTGA ACAAGGTCGT GGTTTTGCTG TCGTGGCGGA TGAGGTTCGT GTATTGAGCC AACGTACTCA CGCATCAACG CAAGAGATCC AAGAGACAAT CGAAATGCTG CAAGGCACAA CGGCGAAAGC GGTGGGTATC ATGGATGACA GTCGTCGTCT TGCTGACACT AGTGTCGATG ATGCAAACTC GGCAGCGGTG AGCTTGACTC AAATCCACTC TGCGGTTGAG CGTATTAGCG ACATGGCAAC GCAAATTGCG TCTGCGGCAG AAGAGCAAGC GTCTGTAACG ACAGAAATCA CTCGCAACAC CGAAGGCATT CGTGACGTGT CTAACGAGCT TTCTGTTGAA GCACACCAAG CAGCAGAGCA AGCGGCGCAT CTGTCTGAGC TTTCTCATGA GCTAGAGCAA GAGATCAAAC GCTTTAAACT GTAA
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Protein sequence | MKLSLKQKLI GASLSAVVVM ATALTWLSAD QLFDQTRSGV YSRAQSLSNA ASEGISDWVS IRKDIAKAFN DYSTEKDVVP FLQQARKAGG FDDIFLGTPE GGMYRSHPER NRADYDPRTR PWYKDANAAG KQIITEAYQD AITNALLVTI AEPVMKNGKF IGVVGADVLI DQLIDDVINL DAGENAHAML IDMNDGTFLA HPNKSLTLKP ITDLTQEFSK GSIERAANSG AIETATIKGQ EKLFYFSKVP GTNWMFAIEM DRATEEASHA QLLREMVITA VLITIVVIVA VSWLVGFLFR DLGRVSQALE EIASGEGDLT QRLEPRSDDE VGKLADNFNR FVGNMHTMVT KLSHVSSALS EQARTTAQQA EERSQRISYQ QDEINMVATA VNEVAAATQE IAGNADNTAS SSEEAVQACV HGSGQVTQTQ GSIQNLAQEV QVATNVIQEL EAHGNAINTI LSTIQGIAEQ TNLLALNAAI EAARAGEQGR GFAVVADEVR VLSQRTHAST QEIQETIEML QGTTAKAVGI MDDSRRLADT SVDDANSAAV SLTQIHSAVE RISDMATQIA SAAEEQASVT TEITRNTEGI RDVSNELSVE AHQAAEQAAH LSELSHELEQ EIKRFKL
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