| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1629 |
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| Symbol | |
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| ID | 5662026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1973037 |
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| End bp | 1974908 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641236217 |
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| Product | methyl-accepting chemotaxis sensory transducer with Cache sensor |
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| Protein accession | YP_001501489 |
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| Protein GI | 157961455 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.438395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTCAT ATTCGCTCAA GACAAAGATC CTTCTATCAG TTGTGCTAGC CTTTTCCGTC
GTAATAGGAC TGCTATCATG GCAAAGTTAT TCGAGCCAAA AGCAACTGTT AATGAAAAGC
AGTGCCGATC AAGTGCGCCA ACTTGGTGAG CAACAAGCAA AACAGATCCA AGAGTGGCTA
GCCGATCGTA AAAGAATCGT AGCCGCAATT GCTGAAAAAG TTGATGGCGA TAGCCTAAAT
GTTCTGCAAC AGGCTCAACT ATCAGGCCCT TTTCAATTGT CCTATTTCGG TTCTCAATCA
GGCCAAATGT TAGATTCAGA TCCTAGCATT GATCGTAGCG GTTACGATCC TCGCAGCCGC
GGCTGGTATC AACAAGCCAT CGCCAAGCAA ACTTCAATTC TAACCAAACC TTATATCGAT
GTTGCCTACA ATATTCTCGT CGTCACTATG GCACAACCCG CTAAAGGTGG TGTGGTTGGC
AGCGACTTGT CGATTGCTAG CCTAGTGGAT AGCGTTAACA ATATGCAGTT ACCTGCGAAG
GGCTACGCCA TTATGATGCA TAAAGATGGC ACCGTTATCG CGTATAAAGA CCATGCTAAA
TCAATGGGGC CAATACAGAA TATCGACCGT CAGCTTAACG CTCAACTCCC TTCTAAAAGC
CGCCAAACAG ATAGCTTATT ACCGCTTTAT TTTGAAAGTG AAGGGCGTGA CAAGCTAGTG
TGGGGCTCTG AGATCCCAAA TACTGACTGG GAACTTATCT TTGTTCTCGA TAAAGAAACC
TTAGAAGCGC CGTTAAGTAA ATTACTGCTG ACCCAACTTG GCTTGTCAGC ACTTGCTCTC
GTCTTTAGCG TCCTAGCTAT CTCATGGTTC TTAACCATTT TACTCGCGCC ACTTGGCCGA
GTATCACAAG CCTTAGCCCA TATTGCTGAC GGTAATGGCG ATCTGACTCA ACGCATCGAA
GTAGATACTC AGGATGAAGT GGCTGTACTA GCTGCAAGCT TTAACCGGTT TGTGGCAAGC
CAACACCAAC TAATTAGTCA TATTCGACAG CTAGCTGGTG AGTTAGATAG CGATGCCCAG
CACAGCTTGG CGACCAATCA AACGACAGTA GATGAGTTAC AACGCCAGCA GCAAGAAGTG
GCTATGGTTG CAACAGCCGT AACCGAAATG GCCAGTGCCA CCCATGAAAT CGCCGCTAAT
GCGGAGAATA CTGCTACCGC AGCTCAGCAG TCGGCAACAA GTAGTGAAGA AGGCAAAGGC
TTAGTCGATA AGACTCGTAG CACAATTAAC TCGCTGGCAA ATGAAGTAGG TGAAGCTACG
GATGTTATTG GTGAGCTCAA TCTACATGCT CAAGCCATCT CTGGTATTTT AACTACCATT
CAAGGCATTG CAGAGCAAAC TAACCTATTA GCATTAAACG CTGCGATTGA AGCGGCCCGC
GCCGGCGAGC AAGGCCGTGG CTTTGCGGTT GTTGCCGATG AAGTCAGAGT CTTATCACGC
CGTACTCAGG ACTCAACTCA AGAGATCTAC ACCACTATCG AGACCTTGCA AAGCACCACT
AAAAAAGCGG TACTCTTGAT GCAAAGTAGC CAAGGCTTGG CGAGCGACAG TGTCACCGAT
GTCAACGCCG CCAGCAAAGC ACTTGAAGAG ATCACTCAGG CGGTCAATGT GATCTCAGAT
ATGGCAAGTC AAATAGCGAC TGCGGCCGAG GAGCAAACTC AGGTGACCAA TGAGATCACC
CAAAACACCG TCGCGATTAA GGATGTCACA GATGACATTA CCGAGTCGGC GCTTGAGCAT
CTGAATCAAG CCCAAGCGTT AAAAGATAGA GCCGATAATC TAAATTCAAA GGTCGATACC
TTTATCTTGT AA
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| Protein sequence | MNSYSLKTKI LLSVVLAFSV VIGLLSWQSY SSQKQLLMKS SADQVRQLGE QQAKQIQEWL
ADRKRIVAAI AEKVDGDSLN VLQQAQLSGP FQLSYFGSQS GQMLDSDPSI DRSGYDPRSR
GWYQQAIAKQ TSILTKPYID VAYNILVVTM AQPAKGGVVG SDLSIASLVD SVNNMQLPAK
GYAIMMHKDG TVIAYKDHAK SMGPIQNIDR QLNAQLPSKS RQTDSLLPLY FESEGRDKLV
WGSEIPNTDW ELIFVLDKET LEAPLSKLLL TQLGLSALAL VFSVLAISWF LTILLAPLGR
VSQALAHIAD GNGDLTQRIE VDTQDEVAVL AASFNRFVAS QHQLISHIRQ LAGELDSDAQ
HSLATNQTTV DELQRQQQEV AMVATAVTEM ASATHEIAAN AENTATAAQQ SATSSEEGKG
LVDKTRSTIN SLANEVGEAT DVIGELNLHA QAISGILTTI QGIAEQTNLL ALNAAIEAAR
AGEQGRGFAV VADEVRVLSR RTQDSTQEIY TTIETLQSTT KKAVLLMQSS QGLASDSVTD
VNAASKALEE ITQAVNVISD MASQIATAAE EQTQVTNEIT QNTVAIKDVT DDITESALEH
LNQAQALKDR ADNLNSKVDT FIL
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