Gene PSPA7_5279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_5279 
Symbol 
ID5358177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp5440936 
End bp5443074 
Gene Length2139 bp 
Protein Length712 aa 
Translation table11 
GC content68% 
IMG OID640814325 
Productputative chemotaxis transducer 
Protein accessionYP_001350611 
Protein GI152985612 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0493383 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTCA AGTCGATCCA GTTTTCTGTC GCCGCCCTCG CCGGCGCCAG CGTTCTAAGC 
GTCGTCGTGG TGCTGGTGCT GTACGCCCTG TTCGCCGGCG CGCGCACCCA GGAGCTGGTG
CAGCAGCGCA CCCAGGGCCT GTTGGAAAAG GTCATCAACG AGCGCCTGGT GGCGCTGGCG
CGCGCCCAGG TCAGCCAGAT CCAGCGCGAG CTGGAATATC CGCTGACAGT GGTGCATGGC
CTGGCCAACA GTACCCGCCT GCTCGGCGAG CCGGGCACCG ACGGCATGCC GCAGCTGAAC
GCCAGCCGCG ACGAGATTTC CGCGCTGCTG CGCAGCACCG TGCAGAACAA TCCTAAACTG
CTCGACACCT TCATGGCCTG GGAGCCGGAC GCCTTCGGCA GCGACGCCGC CTTCGCCGGC
CAGACCGGCA AGGGCTACGC CCCGGACGGC CGCTACCTGC CCTGGTGGTA CCGTGGCGCC
GACGGCCAGC CGATCGTCGA GTCGATGGTC GGCACCATAG ACAGCGAGAA GCTGCTGCCC
ACCGGCGTGC GCGAGAACGA GTTCTACGCC TGTCCGAAGG AGCGGAAGCG GCCCTGCATC
GTCGACCCGG CCCCCTACGA GATGGGCGGC AGGACGGTGA TGATGTCGTC GTTCAACGTG
CCGATCATGG TCGGCGGCCA GTTCCGCGGC GCGGTCGGCG CCGATCTCTC GCTGGCCTTC
ATCCAGGACC TGCTCAAGCG CGCCGACCAG CAACTCTACG ACGGCGCCGG GGAAATGGCG
CTGATCGCCA GCAACGGCCG GCTGGTGGCC TATACCCGCG ACGACGGCAA GCTCGGCGAG
CCGGTGAGCA GCGTTCTCGA CAGCAACGAA GTGGATAATC TGAAGAATCT CTCGCTCGAC
CAGCCGCTCT ACGACGTCGA CGCCGAACAT GGACACATCG AGCTGTTCCT GCCCTTCACC
ATCGCCGACA CCGGCGTGCG CTGGACCCTG ATGCTGCAGA TTCCCCAGAC CGCGGTGTTC
GGCGAACTGC AACAGTTGCA GGCCGACCTG AGCAGCCAGC GCCAGCAGGA CATCCTCGGC
ATGAGCCTGG CCGGCCTGGT GGTGGCGGCC CTCGGCCTGC TGGTGGTATG GCTGGTCGGC
TACGGCATCG CCCGGCCGCT GCGCCAGCTG GTCGGCATGC TCGACGACAT CGCCCAGGGC
GAAGGCGACC TGACCCGCCG CCTGAGCAGC GAGCGCGCCG ACGAGTTGGG CTCCATCGCC
AATGGCTTCA ATACCTTCCT CGGCAAGCTG CAGAACATGA TCGGCCAGGT GGTGCAGTCG
GTGCAGAAGG TCAGCGACTC CTCGGAACAC ACCGCCGACA TCGCCATCCG CACCAACCAG
GGGGTCCAGC AGCAACTGGC GGAAATCGAG CTGGTGGCCA CCGCGGTCCA CGAGATGACC
GCCACCGCCC AGGACGTGGC GCGCAACGCC ACCCACGCCG CCGAGGCGGC CAACCACGCC
GACCAGGCCG CGCACCAGGG CAAGCAGATC GTCGAGAGCA GCTCGGCGGC GATCCAGGCC
CTGGCCGGCG AGATCGGCCG CGCGGTCGGG GTGGTGCAAA ACCTGGCCAA GGACAGCGAG
AACATCAACG CGATCCTGGT GGCGATCCGC GGCATCGCCG AGCAGACCAA CCTGCTCGCC
CTCAACGCCG CTATCGAGGC CGCCCGCGCC GGCGAGCAGG GGCGCGGCTT CGCGGTGGTG
GCCGACGAGG TGCGCAACCT GGCGCAGAAG ACCCAGCAGG CCACGGAAGA GATCCAGAGC
ATGATCCAGC AATTGCAGCA GGGCACCCGC GACGTGGTGA AGGTCATGCA GGACAGCCAG
GACCGTACCG ACGACAGCGT GCGTCATGCG CGCCAGGCGG CCGAGGCGCT GGAGTCGATC
ACCCAGGCGG TGTCGGTGAT CAACGACATG AACACCCAGA TCGCCAGCGC CGCCGAGGAG
CAGAGCGCGG TCGCCGAGGA CATCAACCGC AACGTCAGCA ACATCGGCCA GGTCGCCAAC
CAGGTCGCCG GCGGCGCCGA CGAGGCCTCC CAGGCCAGCG CCGAGCTGAC CCGGCTGGCC
GAGCAGCAGC GGCGGCTGGT GAATCAGTTC AAGGTGTAG
 
Protein sequence
MKLKSIQFSV AALAGASVLS VVVVLVLYAL FAGARTQELV QQRTQGLLEK VINERLVALA 
RAQVSQIQRE LEYPLTVVHG LANSTRLLGE PGTDGMPQLN ASRDEISALL RSTVQNNPKL
LDTFMAWEPD AFGSDAAFAG QTGKGYAPDG RYLPWWYRGA DGQPIVESMV GTIDSEKLLP
TGVRENEFYA CPKERKRPCI VDPAPYEMGG RTVMMSSFNV PIMVGGQFRG AVGADLSLAF
IQDLLKRADQ QLYDGAGEMA LIASNGRLVA YTRDDGKLGE PVSSVLDSNE VDNLKNLSLD
QPLYDVDAEH GHIELFLPFT IADTGVRWTL MLQIPQTAVF GELQQLQADL SSQRQQDILG
MSLAGLVVAA LGLLVVWLVG YGIARPLRQL VGMLDDIAQG EGDLTRRLSS ERADELGSIA
NGFNTFLGKL QNMIGQVVQS VQKVSDSSEH TADIAIRTNQ GVQQQLAEIE LVATAVHEMT
ATAQDVARNA THAAEAANHA DQAAHQGKQI VESSSAAIQA LAGEIGRAVG VVQNLAKDSE
NINAILVAIR GIAEQTNLLA LNAAIEAARA GEQGRGFAVV ADEVRNLAQK TQQATEEIQS
MIQQLQQGTR DVVKVMQDSQ DRTDDSVRHA RQAAEALESI TQAVSVINDM NTQIASAAEE
QSAVAEDINR NVSNIGQVAN QVAGGADEAS QASAELTRLA EQQRRLVNQF KV