Gene PP_2249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2249 
Symbol 
ID1045136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp2565017 
End bp2566948 
Gene Length1932 bp 
Protein Length643 aa 
Translation table11 
GC content63% 
IMG OID637145668 
Productmethyl-accepting chemotaxis transducer 
Protein accessionNP_744398 
Protein GI26988973 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.477129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.786945 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC TGCGCCCTCC CCTCATTGGC TCAAGGTCTC GAAACATGAA CCTGAAATTT 
CGCCACAAGA TCCTGCTCAG CGCCTGCGGC GTCGTGGTTT TGGCATTTGC CCTGTTCACG
CTCTACAACG ACTACCTGCA ACGCAATACC ATCCGCCAGA ATATCGAAGC CTCGGTGCAG
CAGTCCGGTG CACTGACCGC CAGCAGTGTG CAGAACTGGA TGAGCGGGCG CATTCTGGTG
CTGGAGAACC TGGCCCAGGA CATCGGCCAG CAAGGCGCCG GCGACACCCT GGCAGGGCTG
ATCGAGCAGC CGTCCTACAC GCGTAATTTC CTGTTCACCT ACCTGGGCCA GGCCAACGGC
GAATTCACCC AGCGCCCGGA TGCCCAGATG CCCGCCGGTT ACGACCCGCG CCAGCGCCCT
TGGTATGGCG CCGCCGCCAA CGCCGGGCAG ACCGTGCTGA CCGCCCCGTA CCAGGGTGCA
GTCGGTGGCC TGATGGTGAC CATCGCCACG CCGGTGAAGA GCAAGCGCAA TGGCGAACTG
ATCGGTGTAG TCGGCGGTGA CGTGACCCTC GACACCCTCG TCGAGATCAT CAACTCGGTC
GACTTCGGCG GCATCGGTCA CGCCTTCCTG GCCGACGCCA ATGGCCAGGT GATCGTCAGC
CCCAATAAAG ACCAGGTGAT GAAGAACCTC AAGGACATCT ACCCAGGCAG CAACCTGCGG
GTGGCCGCCG GCATGCAGGA TGTCACCCTC GACGGCCAGG ACCGCATCAT CTCGTTCGCC
CCGGTGGCCG GCCTGCCTTC GGCGCAGTGG TACATCGGGC TGTCGATCGA CAGGGACAAG
GCCTATGCCG CGCTCAGCCA GTTCCGCACC TCGGCGATCA TTGCCATGCT GATTGCCGTG
GCCGCCATCG CCGGCCTGCT CGGCCTGCTG ATTCCGGTGC TGATGAGCCC GCTGACCACC
ATGGGCCGCG CCATGCGCGA CATCGCCGAG GGTGAAGGTG ACCTTACCCG CCGCCTGGCC
GTGCAGAACA AGGACGAGTT CGGCGAACTG GCTACCTCGT TCAACCGTTT TGTCGAACGT
ATCCATGCCT CGATCAGCGA AGTGTCCTCG GCCACCCGCC TGGTGCATGA CCTTTCGGAG
AAAGTGGTCA GCGCGTCCAA TGCGTCGATC ATCGGGTCTG AAGAACAGAG CATGCGCACC
AACAGCGTCG CTGCGGCCAT CAACGAACTG GGCGCCGCCA CCCAGGAAAT CGCCCGCAAC
GCCGCAGATG CTTCACAACA TGCCAGCGGT GCCAGCGAAC AGGCGCACGG TGGCCGTGAA
GTGGTTGAAG AAGCCATCAG CGCCATGACT GCCCTGTCGC AACGGATCAG CGAGTCGTGC
GCGCAGATCG AAACGCTCAA CGCCAGCACC GACGAAATCG GCAAGATCCT CGACGTGATC
AAGGGCATTT CTCAGCAGAC CAACCTGCTG GCACTGAACG CCGCCATCGA AGCGGCCCGT
GCCGGTGAAG CCGGCCGTGG CTTTGCCGTG GTGGCCGACG AGGTGCGCAA CCTGGCGCAC
CGTACCCAGG AGTCGGCGGA AGAAATCCAC CGCATGATCA CCAGCCTGCA GGTGGGCTCG
CGCGAAGCGG TGCATACCAT GAACACCAGC CAGGTTTCCA GCGAACAGAC CGTGCAGGTG
GCCAACCAGG CCGGCGAACG CCTGGCCAGC GTGACCCAGC GCATTGGCGA AATCGATGGC
ATGAACCAGT CGGTGGCGAC AGCGACCGAA GAACAGACCG CCGTGGTCGA GAGCCTCAAC
CTGGACATCA CCCAGATCAA CGCCCTGAAC CAGCAGGGGG TGGAGAACCT CAACGAGACC
CTGCGCCATT GCGACCAGCT GGCCCAGCAG GCTGGGCGTT TGAAGCAGTT GGTGGGCAGC
TTCAGGATTT AA
 
Protein sequence
MSALRPPLIG SRSRNMNLKF RHKILLSACG VVVLAFALFT LYNDYLQRNT IRQNIEASVQ 
QSGALTASSV QNWMSGRILV LENLAQDIGQ QGAGDTLAGL IEQPSYTRNF LFTYLGQANG
EFTQRPDAQM PAGYDPRQRP WYGAAANAGQ TVLTAPYQGA VGGLMVTIAT PVKSKRNGEL
IGVVGGDVTL DTLVEIINSV DFGGIGHAFL ADANGQVIVS PNKDQVMKNL KDIYPGSNLR
VAAGMQDVTL DGQDRIISFA PVAGLPSAQW YIGLSIDRDK AYAALSQFRT SAIIAMLIAV
AAIAGLLGLL IPVLMSPLTT MGRAMRDIAE GEGDLTRRLA VQNKDEFGEL ATSFNRFVER
IHASISEVSS ATRLVHDLSE KVVSASNASI IGSEEQSMRT NSVAAAINEL GAATQEIARN
AADASQHASG ASEQAHGGRE VVEEAISAMT ALSQRISESC AQIETLNAST DEIGKILDVI
KGISQQTNLL ALNAAIEAAR AGEAGRGFAV VADEVRNLAH RTQESAEEIH RMITSLQVGS
REAVHTMNTS QVSSEQTVQV ANQAGERLAS VTQRIGEIDG MNQSVATATE EQTAVVESLN
LDITQINALN QQGVENLNET LRHCDQLAQQ AGRLKQLVGS FRI