Gene Shew185_4141 details

Gene Information

• Locus tag: Shew185_4141
• ID: 5373210
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: -
• Start bp: 4941842
• End bp: 4943713
• Gene Length: 1872 bp
• Protein Length: 623 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640832407
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_001368321
• Protein GI: 153002640
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTCAT ATTCGCTCAA GCAAAAAATT CTGTTCTCCG TCGTGGTAGC CCTTTCACTC 
GTGATTGGTT TGTTGTCATG GCAAAGTTAT TCCAGCCAAA AGTCTCAGCT GTTAAAAAAC 
AGCCTAGAGC AAGTGCAGCG CTTAGGTGAG CAGCAGGCTG AGCGTATTCA AGAATGGTTG 
GCCGGCCGCC AAGATATTAT GGGGGCACTG GCGAGCAAAG TTGAGGGTGA TAGCCTAAAT 
ACGTTACAAC AAGCACAAGC GTCTGGCCGT TTCCAGTTGA CCTATTTTGG GAGCCAAGCG 
GGGCAAATGC TGGATTCTGA TCCGAGTGTA GACCGTACTG GTTATGATCC TCGTAGCCGT 
CCTTGGTATC AACAAGCCAT CAGTGCACGC GGTCCTATCT TGACTAAGCC TTACGTGGAT 
GTGGCTTATA ACATTCTGGT TGTGACTATG GCGCAGCCTA CGGCACAAGG TGTTGTGGGT 
GGTGACTTAT CTATCGCGAG CCTAGTTGAC GGTGTTAATC GGATGAAGTT ACCGGCCAAC 
GGTTATGCCA TCATGATGCA CAAAGACGGC ACGGTTATCG CTTATAAAGA TCAAGCGAAG 
ACGATGAAAC CTATAGGTGA AATCGACAAC GATCTTAATC GCAACTTGCC AGAACAGAGC 
CGTGCAGCGG GTACTCTGTT GTCTATGTAT TTTGAAAATG AAGGACGCGA TAAGTTAGTT 
TGGAGCGTTG ATATTCCCAA TACAGATTGG GAATTAGTGT TAGTGCTTGA TAAGGAAACG 
CTAGAAGCGC CACTGTCGAG CCTGTTACTC ACCCAACTGG GTTTATCGGC ACTCGTACTG 
CTGTTGAGTG TGTTAGCGAT TTCTTGGTTA GTTGGCATGT TACTGGGTCC ATTGAGCCGA 
GTATCGCAGG CACTGGCGCG TATCGCCGAT GGTAACGGTG ATTTAACTCA GCGTATTTCA 
GTCGACACTC AAGATGAAGT GGGCGTACTT GCCGATAGCT TTAACCGTTT TGTCGGCAGT 
CAACATCAGC TGATCAGCCA TATTCGCCAG TTAGCGAATG AGTTAGATGC CGATGCTGAA 
CGTAGTCTGG CCACCACACA AACCTCGGTG ACTGAACTTC AACGTCAACA ACAGGAAGTG 
GCTATGGTCG CGACCGCAGT CACAGAAATG GCGAGTGCTA CCAATGAGAT TGCGGCCAAT 
GCTGAAAACA CGGCAACGGC GGCTCAACAA TCTGCCGCGA GCAGTTTACA GGGTAAAGAG 
TTAGTCAATA AAACCCGTAA CTCGATTAAT TCGCTGGCCG ATGAAGTGAC TCAAGCGACC 
GATGTCATTG CTGATTTGAG CCGTCACGCT CAATCAATTT CAAGCATTCT AGCGACGATT 
CAAGGGATTG CAGAACAAAC CAACTTGTTG GCGCTTAACG CTGCCATTGA AGCGGCGCGT 
GCTGGTGAGC AGGGCCGTGG TTTTGCCGTG GTCGCGGATG AAGTGCGCGT GTTATCGCGC 
CGTACTCAAG ATTCGACTCA AGAAGTGCAT ACCACGATTG AAACACTGCA ACGCACAACC 
GCCAGAGCCG TCAGCTTGAT GGAAAGCAGC CAAGCATTAG CGGGTCACAG TGTTGAAGAT 
GCGAATGCGG CGGCAAAAGC CCTTGAAGAA ATTACTCAAG CGGTCAACGT GATTTCAGAT 
ATGGCAGGCC AAATTGCTAC CGCAGCGGAA GAGCAGACTC AAGTGACAGG TGAAATCACC 
CAAAACACCG TTGCGATTAA AGATGTGACC GATGAGATCA CCGCATCGGC CATGGCAGAT 
TTGGCACAGG CGCGTGGATT AAAAGCCCGT GCTAATGATC TTAATGCACA AGTCGCGACC 
TTTATTCTGT AG 

 

Protein sequence

MNSYSLKQKI LFSVVVALSL VIGLLSWQSY SSQKSQLLKN SLEQVQRLGE QQAERIQEWL 
AGRQDIMGAL ASKVEGDSLN TLQQAQASGR FQLTYFGSQA GQMLDSDPSV DRTGYDPRSR 
PWYQQAISAR GPILTKPYVD VAYNILVVTM AQPTAQGVVG GDLSIASLVD GVNRMKLPAN 
GYAIMMHKDG TVIAYKDQAK TMKPIGEIDN DLNRNLPEQS RAAGTLLSMY FENEGRDKLV 
WSVDIPNTDW ELVLVLDKET LEAPLSSLLL TQLGLSALVL LLSVLAISWL VGMLLGPLSR 
VSQALARIAD GNGDLTQRIS VDTQDEVGVL ADSFNRFVGS QHQLISHIRQ LANELDADAE 
RSLATTQTSV TELQRQQQEV AMVATAVTEM ASATNEIAAN AENTATAAQQ SAASSLQGKE 
LVNKTRNSIN SLADEVTQAT DVIADLSRHA QSISSILATI QGIAEQTNLL ALNAAIEAAR 
AGEQGRGFAV VADEVRVLSR RTQDSTQEVH TTIETLQRTT ARAVSLMESS QALAGHSVED 
ANAAAKALEE ITQAVNVISD MAGQIATAAE EQTQVTGEIT QNTVAIKDVT DEITASAMAD 
LAQARGLKAR ANDLNAQVAT FIL