| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_2154 |
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| Symbol | |
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| ID | 5109494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2376854 |
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| End bp | 2378737 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503398 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001187646 |
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| Protein GI | 146307181 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0789614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.507372 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCG CTCACAAGGT CGGCATCGCA GCCGCTACCG TTCTCTTTCT CACCACCAGC
CTGCTGTCGC TGCTGCAGGT CAGCCAGGTG CGCGACACCC TGCGCGGCCA GGTGGAAGCC
AGCATTTCCG AATCGAGCAA CGCGCTGGCC AGGCAGATCG AGAACTGGCT CAACGCCAAG
CTGCGCCTGA TCGATCTGAT GGCGCAGACC ATCGACAGCA ACTACAGCCC GCAGGAGGTC
CAGCGGGTGT TCGATGCGCC GCTGCTGAAA AACGAATTCA TCCTGGTATT CGGAGCGTTG
GAAGCGGACG GCAAGCCGAT CAAGAACAGC GACGACTGGA AGCCCAGCCC TGACTGGGAC
GGCCGCAAGC GCCCCTGGTA CGCCACCGGC AAGGGCGGCA GCCAGGCCAT GCTGACGGAG
CCCTACGTGG ACTCCACCAC CAATGAGATT CTCATCTCCG CCGTGGCCCG AATCAGCGAT
GCGGGCCAGT TTCTCGGCGC CTTCGGTGGC GATATCCGCC TGCAGTCGGT GGCCGATGCG
GTCAACACCC TGGATTTCAA CGGCGCCGGC TATGCCTTCC TGCTGAGCCG CTCGGGCAAC
ATCATTTCCC ACCCCAACGC CGACTACAAC GGCAAGGCCT ACAGCGAACT GTTCGACGGC
CAGAGCCCGG CATTGGGCAA GGAGCTGCGC GAAGTGCAAG CCGGCGGCAA GAGCCTGCTG
CTGTCCTTCA CCCCGCTGCC CAACCTGCGC GGCATGGACT GGTACATCGG CGTGGTGCTG
GATGAAAGCG TGGTCATGGC CGAAGCCAAT CGCCTGACCT GGCTGGCAGT GATCGGTACC
GTGATCGGCG TCGCCATCAG CCTGGTGGTG CTCGGCCTGC TGATGAACAG CCTGCTCAAA
CCGCTGGGCC TGCTCAGCAC CTCGCTGCGC GAGATCAACA GCGGCGAAGG CGACCTGACG
CGCCGCCTGG CCATCACCAG CAACGACGAG ATCGGCGAGC TGTCGCAGGA GTTCAACCGT
TTCCTGCAGA CCTTGCAGAC CCTGATCGGC GACGTGATGG GCAGCTCGCA GCAGGTGCGC
GAGAGCACCG CCCTCACCTC CCACGAGTCC GAGCAGGCCG CTCGCCGGCT GCAGGAACAG
CTGCAGGAGC TGGACCAACT GGCCACTGCG ATGCAGGAGA TGGCGTCCAC CGCCGAAGAG
GTGGCGCGCA ACGCCCAGGC CGCAGCCCAG GCGGCCGTGG CCGCCAACGA AGAAACCGAA
AACGGCGTTC GCGTGGTGTC GCAGTCCAGC TCGGCCATTC GCCATCTGGC CGACGAGATG
GACGAAACCA GCCATGCGAT CAACGAGCTG GCCAAGCTCA GCCACAACAT CGAGTCGATC
CTGCAGGTGA TCACCAGCAT CGCCGAACAG ACCAATCTGC TGGCGCTGAA CGCGGCCATC
GAAGCGGCGC GCGCAGGCGA GTCCGGCCGC GGCTTCGCCG TGGTCGCCGA CGAGGTGCGC
TCGCTGGCCT CGCGCACGCA GCAGGCCACC CAGGAAATCC GCCAGATGAT CGACCAGCTG
CAAGGCGGCG TGCGTCAGGC CGAGAGCCGC ATGCAGCAGA GCCGCGATAC CGCCAGCAAG
ACCGCCGAGG AAGCCGGCGC AGCCAACGAC ATGCTCGGGC GCATTCGCGA GGCGATTACC
CGCATCAACG ACATGAACCT GCAGATCGCC ACCGCCGCCG AGGAGCAGAG CGCCACCACC
GAGGAAATCA ACCGCAACAC CACCAACATT CGCGACATCA GCCATGAACT GGCCGGCGGC
GCCGAACAGC AGGTGCGCCA ATGCGCCTCG ATGGTGGAAC AGGTGGGCCA GCAGGACCGT
CTGCTCGGCC GCTTCAAGGT CTGA
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| Protein sequence | MKIAHKVGIA AATVLFLTTS LLSLLQVSQV RDTLRGQVEA SISESSNALA RQIENWLNAK
LRLIDLMAQT IDSNYSPQEV QRVFDAPLLK NEFILVFGAL EADGKPIKNS DDWKPSPDWD
GRKRPWYATG KGGSQAMLTE PYVDSTTNEI LISAVARISD AGQFLGAFGG DIRLQSVADA
VNTLDFNGAG YAFLLSRSGN IISHPNADYN GKAYSELFDG QSPALGKELR EVQAGGKSLL
LSFTPLPNLR GMDWYIGVVL DESVVMAEAN RLTWLAVIGT VIGVAISLVV LGLLMNSLLK
PLGLLSTSLR EINSGEGDLT RRLAITSNDE IGELSQEFNR FLQTLQTLIG DVMGSSQQVR
ESTALTSHES EQAARRLQEQ LQELDQLATA MQEMASTAEE VARNAQAAAQ AAVAANEETE
NGVRVVSQSS SAIRHLADEM DETSHAINEL AKLSHNIESI LQVITSIAEQ TNLLALNAAI
EAARAGESGR GFAVVADEVR SLASRTQQAT QEIRQMIDQL QGGVRQAESR MQQSRDTASK
TAEEAGAAND MLGRIREAIT RINDMNLQIA TAAEEQSATT EEINRNTTNI RDISHELAGG
AEQQVRQCAS MVEQVGQQDR LLGRFKV
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