More than 300 homologs were found in PanDaTox collection
for query gene Rfer_3449 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007908  Rfer_3449  methyl-accepting chemotaxis sensory transducer  100 
 
 
632 aa  1269    Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I3209  methyl-accepting chemotaxis protein, putative  47.59 
 
 
601 aa  498  1e-139  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_4247  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.67 
 
 
599 aa  494  9.999999999999999e-139  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008785  BMASAVP1_A3471  putative methyl-accepting chemotaxis protein  47.25 
 
 
605 aa  493  9.999999999999999e-139  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3786  methyl-accepting chemotaxis sensory transducer with Cache sensor  48.67 
 
 
610 aa  495  9.999999999999999e-139  Delftia acidovorans SPH-1  Bacteria  normal  0.0254049  normal  0.3858 
 
 
-
 
NC_006348  BMA2894  methyl-accepting chemotaxis protein, putative  47.09 
 
 
605 aa  491  1e-137  Burkholderia mallei ATCC 23344  Bacteria  normal  0.955347  n/a   
 
 
-
 
NC_007347  Reut_A0036  methyl-accepting chemotaxis sensory transducer  46.08 
 
 
599 aa  489  1e-137  Ralstonia eutropha JMP134  Bacteria  normal  0.226397  n/a   
 
 
-
 
NC_010681  Bphyt_2718  methyl-accepting chemotaxis sensory transducer with Cache sensor  46.24 
 
 
599 aa  490  1e-137  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_0523  methyl-accepting chemotaxis sensory transducer with Cache sensor  47.67 
 
 
608 aa  489  1e-137  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_5980  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.83 
 
 
599 aa  486  1e-136  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3992  methyl-accepting chemotaxis sensory transducer  45.68 
 
 
599 aa  487  1e-136  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4375  methyl-accepting chemotaxis sensory transducer  45.68 
 
 
599 aa  487  1e-136  Burkholderia cenocepacia HI2424  Bacteria  normal  0.480091  normal 
 
 
-
 
NC_007511  Bcep18194_B1642  methyl-accepting chemotaxis sensory transducer  45.85 
 
 
599 aa  484  1e-135  Burkholderia sp. 383  Bacteria  normal  normal  0.255489 
 
 
-
 
NC_007951  Bxe_A1405  methyl-accepting chemotaxis sensory transducer  45.91 
 
 
599 aa  485  1e-135  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0536  methyl-accepting chemotaxis sensory transducer with Cache sensor  47.67 
 
 
609 aa  485  1e-135  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_3975  methyl-accepting chemotaxis protein  47.25 
 
 
601 aa  479  1e-134  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3894  methyl-accepting chemotaxis protein  47.25 
 
 
601 aa  479  1e-134  Burkholderia pseudomallei 668  Bacteria  normal  0.0518753  n/a   
 
 
-
 
NC_007434  BURPS1710b_0112  putative methyl-accepting chemotaxis protein  47.25 
 
 
605 aa  479  1e-134  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_3790  methyl-accepting chemotaxis sensory transducer  46.67 
 
 
599 aa  482  1e-134  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.178746 
 
 
-
 
NC_010552  BamMC406_4256  methyl-accepting chemotaxis sensory transducer with Cache sensor  46.33 
 
 
599 aa  473  1e-132  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.844754 
 
 
-
 
NC_011992  Dtpsy_2088  methyl-accepting chemotaxis sensory transducer with Cache sensor  46.26 
 
 
617 aa  474  1e-132  Acidovorax ebreus TPSY  Bacteria  normal  0.258516  n/a   
 
 
-
 
NC_003295  RSc0606  putative methyl-accepting chemotaxis transmembrane protein  47.07 
 
 
617 aa  471  1.0000000000000001e-131  Ralstonia solanacearum GMI1000  Bacteria  normal  0.535208  normal  0.212062 
 
 
-
 
NC_007336  Reut_C6319  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  45.02 
 
 
601 aa  462  1e-129  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_3501  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.54 
 
 
600 aa  464  1e-129  Ralstonia pickettii 12J  Bacteria  normal  normal  0.112529 
 
 
-
 
NC_003295  RSc3307  putative methyl-accepting chemotaxis transmembrane protein  45.27 
 
 
646 aa  459  9.999999999999999e-129  Ralstonia solanacearum GMI1000  Bacteria  normal  0.154231  normal 
 
 
-
 
NC_012912  Dd1591_3111  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.55 
 
 
596 aa  459  9.999999999999999e-129  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_3176  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.7 
 
 
600 aa  459  9.999999999999999e-129  Ralstonia pickettii 12D  Bacteria  normal  0.0503971  normal 
 
 
-
 
NC_008752  Aave_0421  methyl-accepting chemotaxis sensory transducer  46.83 
 
 
618 aa  459  9.999999999999999e-129  Acidovorax citrulli AAC00-1  Bacteria  normal  0.627209  normal 
 
 
-
 
NC_008752  Aave_1100  methyl-accepting chemotaxis sensory transducer  45.32 
 
 
611 aa  460  9.999999999999999e-129  Acidovorax citrulli AAC00-1  Bacteria  normal  0.127748  normal 
 
 
-
 
NC_010002  Daci_0582  methyl-accepting chemotaxis sensory transducer  44.91 
 
 
610 aa  452  1.0000000000000001e-126  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_2328  methyl-accepting chemotaxis sensory transducer  45.44 
 
 
594 aa  446  1.0000000000000001e-124  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_2753  methyl-accepting chemotaxis protein  43.5 
 
 
595 aa  445  1.0000000000000001e-124  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0257893  n/a   
 
 
-
 
NC_010465  YPK_2833  methyl-accepting chemotaxis sensory transducer with Cache sensor  43.67 
 
 
595 aa  447  1.0000000000000001e-124  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A1452  methyl-accepting chemotaxis protein  43.67 
 
 
595 aa  447  1.0000000000000001e-124  Yersinia pestis Angola  Bacteria  normal  0.19796  normal  0.220045 
 
 
-
 
NC_007509  Bcep18194_C6641  methyl-accepting chemotaxis sensory transducer  44.26 
 
 
609 aa  444  1e-123  Burkholderia sp. 383  Bacteria  normal  normal  0.0855945 
 
 
-
 
NC_007963  Csal_0126  methyl-accepting chemotaxis sensory transducer  43.52 
 
 
613 aa  445  1e-123  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3477  methyl-accepting chemotaxis sensory transducer with Cache sensor  44.76 
 
 
606 aa  441  9.999999999999999e-123  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_1003  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.52 
 
 
596 aa  437  1e-121  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B5136  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  45.09 
 
 
599 aa  437  1e-121  Ralstonia eutropha JMP134  Bacteria  normal  0.481543  n/a   
 
 
-
 
NC_012880  Dd703_2920  methyl-accepting chemotaxis sensory transducer with Cache sensor  41.29 
 
 
596 aa  438  1e-121  Dickeya dadantii Ech703  Bacteria  normal  0.115472  n/a   
 
 
-
 
NC_010512  Bcenmc03_6304  methyl-accepting chemotaxis sensory transducer with Cache sensor  44.24 
 
 
605 aa  437  1e-121  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.598133  normal 
 
 
-
 
NC_008544  Bcen2424_6698  methyl-accepting chemotaxis sensory transducer  44.05 
 
 
605 aa  435  1e-120  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0770827  normal  0.965565 
 
 
-
 
NC_013421  Pecwa_3307  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.03 
 
 
596 aa  432  1e-119  Pectobacterium wasabiae WPP163  Bacteria  normal  0.298951  n/a   
 
 
-
 
NC_008062  Bcen_6463  methyl-accepting chemotaxis sensory transducer  47.06 
 
 
654 aa  426  1e-118  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_1247  methyl-accepting chemotaxis sensory transducer  43.02 
 
 
609 aa  421  1e-116  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_1273  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
609 aa  420  1e-116  Burkholderia ambifaria MC40-6  Bacteria  normal  0.258977  normal  0.0501221 
 
 
-
 
NC_008752  Aave_1874  methyl-accepting chemotaxis sensory transducer  41.03 
 
 
597 aa  412  1e-113  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0423277  normal 
 
 
-
 
NC_008836  BMA10229_A1648  putative methyl-accepting chemotaxis protein  46.25 
 
 
776 aa  401  9.999999999999999e-111  Burkholderia mallei NCTC 10229  Bacteria  normal  0.562276  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  59.43 
 
 
542 aa  336  7.999999999999999e-91  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  54.7 
 
 
583 aa  334  4e-90  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  59.74 
 
 
554 aa  333  5e-90  Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
NC_007963  Csal_1099  methyl-accepting chemotaxis sensory transducer  55.69 
 
 
699 aa  332  1e-89  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1423  methyl-accepting chemotaxis sensory transducer  41.36 
 
 
584 aa  329  1.0000000000000001e-88  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_5569  methyl-accepting chemotaxis sensory transducer with Cache sensor  40.96 
 
 
630 aa  323  5e-87  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  54.7 
 
 
584 aa  322  9.999999999999999e-87  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1081  methyl-accepting chemotaxis sensory transducer  41.09 
 
 
629 aa  322  9.999999999999999e-87  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1600  methyl-accepting chemotaxis sensory transducer  54.2 
 
 
594 aa  318  2e-85  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.00034667 
 
 
-
 
NC_008543  Bcen2424_3736  methyl-accepting chemotaxis sensory transducer  45.63 
 
 
620 aa  317  5e-85  Burkholderia cenocepacia HI2424  Bacteria  normal  0.455432  normal  0.0212994 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  59.42 
 
 
586 aa  316  6e-85  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_008061  Bcen_4628  methyl-accepting chemotaxis sensory transducer  45.63 
 
 
620 aa  317  6e-85  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  55.1 
 
 
596 aa  315  9.999999999999999e-85  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_3481  methyl-accepting chemotaxis sensory transducer  44.13 
 
 
674 aa  315  1.9999999999999998e-84  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_3785  methyl-accepting chemotaxis sensory transducer  44.44 
 
 
620 aa  315  1.9999999999999998e-84  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.0060774  normal  0.0147123 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  58.44 
 
 
598 aa  314  2.9999999999999996e-84  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  54.46 
 
 
589 aa  314  2.9999999999999996e-84  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_008782  Ajs_4123  methyl-accepting chemotaxis sensory transducer  44.42 
 
 
674 aa  314  2.9999999999999996e-84  Acidovorax sp. JS42  Bacteria  normal  0.162807  normal  0.87643 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  45.05 
 
 
585 aa  313  3.9999999999999997e-84  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  56.88 
 
 
552 aa  313  5.999999999999999e-84  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3119  methyl-accepting chemotaxis sensory transducer  61.48 
 
 
554 aa  313  5.999999999999999e-84  Rhodoferax ferrireducens T118  Bacteria  normal  0.813886  n/a   
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  57.91 
 
 
589 aa  313  6.999999999999999e-84  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
NC_007348  Reut_B5547  methyl-accepting chemotaxis sensory transducer  44.33 
 
 
520 aa  312  1e-83  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  60.28 
 
 
537 aa  312  1e-83  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  59.51 
 
 
622 aa  312  1e-83  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  50.81 
 
 
569 aa  311  2.9999999999999997e-83  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C1139  methyl-accepting chemotaxis sensory transducer, Cache sensor  39.07 
 
 
630 aa  310  6.999999999999999e-83  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.584827 
 
 
-
 
NC_009436  Ent638_2457  methyl-accepting chemotaxis sensory transducer  49.73 
 
 
555 aa  309  9e-83  Enterobacter sp. 638  Bacteria  normal  0.890786  normal 
 
 
-
 
NC_010002  Daci_0036  methyl-accepting chemotaxis sensory transducer  54.43 
 
 
567 aa  307  4.0000000000000004e-82  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1344  methyl-accepting chemotaxis sensory transducer  57.14 
 
 
536 aa  306  5.0000000000000004e-82  Acidovorax citrulli AAC00-1  Bacteria  normal  0.129873  normal  0.199885 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  59.86 
 
 
580 aa  306  8.000000000000001e-82  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  56.68 
 
 
578 aa  306  8.000000000000001e-82  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  60.92 
 
 
578 aa  305  1.0000000000000001e-81  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_008752  Aave_0035  methyl-accepting chemotaxis sensory transducer  53.33 
 
 
558 aa  305  1.0000000000000001e-81  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  52.21 
 
 
591 aa  304  3.0000000000000004e-81  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_008782  Ajs_1017  methyl-accepting chemotaxis sensory transducer  58.8 
 
 
591 aa  303  5.000000000000001e-81  Acidovorax sp. JS42  Bacteria  normal  0.696887  normal 
 
 
-
 
NC_007953  Bxe_C1067  methyl-accepting chemotaxis sensory transducer  46.9 
 
 
634 aa  303  6.000000000000001e-81  Burkholderia xenovorans LB400  Bacteria  normal  0.318926  normal 
 
 
-
 
NC_007947  Mfla_0352  methyl-accepting chemotaxis sensory transducer  41.49 
 
 
649 aa  303  9e-81  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.127099 
 
 
-
 
NC_011992  Dtpsy_0038  methyl-accepting chemotaxis sensory transducer  56.55 
 
 
550 aa  302  1e-80  Acidovorax ebreus TPSY  Bacteria  normal  0.398829  n/a   
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  59.72 
 
 
511 aa  302  1e-80  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  58.03 
 
 
589 aa  302  1e-80  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2436  methyl-accepting chemotaxis sensory transducer  63.6 
 
 
539 aa  302  1e-80  Acidovorax citrulli AAC00-1  Bacteria  normal  0.633872  normal 
 
 
-
 
NC_008782  Ajs_0020  methyl-accepting chemotaxis sensory transducer  56.55 
 
 
550 aa  301  2e-80  Acidovorax sp. JS42  Bacteria  normal  normal  0.857372 
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  57.14 
 
 
532 aa  301  2e-80  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  50 
 
 
661 aa  301  2e-80  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_4161  methyl-accepting chemotaxis sensory transducer  52.75 
 
 
628 aa  301  3e-80  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_0400  methyl-accepting chemotaxis sensory transducer  53.68 
 
 
602 aa  301  3e-80  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0817302 
 
 
-
 
NC_011992  Dtpsy_2969  methyl-accepting chemotaxis sensory transducer  48.54 
 
 
550 aa  301  3e-80  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  52.63 
 
 
527 aa  300  4e-80  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_008782  Ajs_1951  methyl-accepting chemotaxis sensory transducer  58.3 
 
 
508 aa  300  4e-80  Acidovorax sp. JS42  Bacteria  normal  normal  0.747742 
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  58.25 
 
 
557 aa  300  5e-80  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  56.59 
 
 
575 aa  300  5e-80  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
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