| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3825 |
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| Symbol | |
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| ID | 4256812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4545429 |
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| End bp | 4547300 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638124514 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_739859 |
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| Protein GI | 114049309 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCAT ACTCGCTTAA ACAAAAGATC CTGATTTCGG TCGTGATCGC GCTGTCCCTC
GTGATCGGCT TGCTGTCTTG GCAAAGCTAT TCCAGTCAAA AGTCATTGTT GCTGCAAAAT
AGCCTAGAGC AGGTGCAACG CTTGGGTGAG CAACAGGCCG AGCGCATTCA AGAGTGGCTC
GCAGGACGCC AAGATATCGT AGGCGCATTG GCCTCTAAAG TTGAAGGTAA TAGTTTAAGT
GCATTACAGC AGGCGCAGGC CTCAGGGCGA TTCCAGCTGA CCTATTTTGG TACCGAGACT
GGGCAGATGT TGGATTCAGA TCCAAGTATC GACCGCACGG GTTATGATCC GAGAACGCGC
CCTTGGTATA AACAGGCGAT GAATGAGCGC GGTCTTATCC TGACAAAACC CTATGTTGAC
GTGGCCTATA ACGTGTTAGT GGTCACTATG GCGCAGCCGA CTTCTCAAGG TGTGGTTGGG
GGTGATCTCT CGATTGCGAG CCTAGTTGAG AGCGTGAATC GCATGACGCT CCCCGCCAAT
GGCTATGCAA TCATGATGCA CAAAGACGGC ACAGTGATTG CTTACAAAGA TGCTTCAAAG
GCGATGAAGC CTGTCGGCCA AATCGACAAC GATCTGAATC ATGATTTACC GCAGCAGAGC
CGCCAAGCAG GAGCCTTGCT GCCCATGTAT TTTGAGAATG AGGGCCGTGA CAAGTTAGTC
TGGGGCGTCG ATATTCCCAA TACCGACTGG GAATTGGTGA TAGTACTGGA TAAGGAGACC
TTAGAGGCGC CGTTAACCGA TCTTCTGCTG ACGCAATTTG GACTTTCCGC CGTAGTGTTA
TTGCTGAGCG TGTTGGCGAT TTCCTGGTTG GTGAATCTAT TGCTAGGTCC ACTCGGACGC
GTGTCACAGG CGCTGGCACG CATTGCCGAC GGTAATGGCG ATTTAACTCA ACGCATCGAG
GTCGATACAC AGGATGAGGT GGGCGTGTTA GCCGATAGCT TTAACCGTTT TGTCGGCAGC
CAGCATCAAC TCATCAGCCA TATTCGTCAG TTAGCCAGTG AGCTGGATGC GGATGCCGAG
CGCAGTCTTA AAACCAACCA TATTGCCGTG GCAGAGTTGC AACGTCAGCA GCAGGAAGTG
GCTATGGTGG CAACGGCGGT GACCGAAATG GCAAGCGCGA CCAATGAAAT TGCCGCCAAT
GCGGAAAACA CTGCGACAGC GGCGCAGCAG TCGGCTGCGA GCAGTTTCCA AGGCAAAGAG
CTGGTCAATA AAACCCGCAG TTCGATCAAT TCCCTAGCCG ATGAAGTCGC TCAGGCAACA
GACGTGATTG AAGATTTAAG TCGCCATGCA CAGTCGATTT CTAGCATTTT AGCGACTATT
CAAGGGATTG CGGAACAGAC TAACCTATTA GCGCTCAACG CTGCGATTGA AGCCGCCCGC
GCGGGTGAGC AGGGCCGTGG TTTTGCCGTG GTCGCCGATG AGGTACGGGT ATTGTCGCGT
CGGACTCAAG ATTCGACCCA AGAGGTACAT GCGACCATTG AAACCCTGCA ACGCACCACT
GCAAAAGCCG TGAGTTTGAT GGAAAGCAGT CAAATGCTCG CAGGCAACAG CGTGGAAGAT
GCGAATGCCG CCGCAAAGGC GTTGGAAGAA ATCACCCAAG CCGTGAATGT GATTTCGGAT
ATGGCAGGCC AAATTGCCAC TGCCGCCGAA GAGCAAACCC AAGTTACGGG GGAGATCACC
CAAAATACAG TGGCGATCAA GGACGTGACC GACGAAATCA CCGAGGCCGC GAAATCGGAT
CTGACTCAAG CCCAAGGATT AAAGGCGCGC GCGAATGATC TTAATGCACA GGTAGCGACC
TTTATTCTCT AA
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| Protein sequence | MNSYSLKQKI LISVVIALSL VIGLLSWQSY SSQKSLLLQN SLEQVQRLGE QQAERIQEWL
AGRQDIVGAL ASKVEGNSLS ALQQAQASGR FQLTYFGTET GQMLDSDPSI DRTGYDPRTR
PWYKQAMNER GLILTKPYVD VAYNVLVVTM AQPTSQGVVG GDLSIASLVE SVNRMTLPAN
GYAIMMHKDG TVIAYKDASK AMKPVGQIDN DLNHDLPQQS RQAGALLPMY FENEGRDKLV
WGVDIPNTDW ELVIVLDKET LEAPLTDLLL TQFGLSAVVL LLSVLAISWL VNLLLGPLGR
VSQALARIAD GNGDLTQRIE VDTQDEVGVL ADSFNRFVGS QHQLISHIRQ LASELDADAE
RSLKTNHIAV AELQRQQQEV AMVATAVTEM ASATNEIAAN AENTATAAQQ SAASSFQGKE
LVNKTRSSIN SLADEVAQAT DVIEDLSRHA QSISSILATI QGIAEQTNLL ALNAAIEAAR
AGEQGRGFAV VADEVRVLSR RTQDSTQEVH ATIETLQRTT AKAVSLMESS QMLAGNSVED
ANAAAKALEE ITQAVNVISD MAGQIATAAE EQTQVTGEIT QNTVAIKDVT DEITEAAKSD
LTQAQGLKAR ANDLNAQVAT FIL
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