| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4443 |
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| Symbol | |
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| ID | 5872251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4975848 |
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| End bp | 4977722 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641549578 |
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| Product | methyl-accepting chemotaxis sensory transducer with Cache sensor |
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| Protein accession | YP_001670667 |
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| Protein GI | 167035436 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0000033578 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACAAAA GCCTTCGTTT CAGCCACAAG ATTCTTTTGG CAGCATCACT GATCGTGATA
CTTGCCTTCA GCCTTTTCAC CCTCTACAAC GATTACCTCC AGCGTAATGC GATCCGCGAG
GACCTGGAAA ACTATCTGGC TGAAATGGGC ACCTCCACTT CGACCAACAT CCGCAACCTG
TTCGAAGGCC GCATCAAACT GGTGGAGAAC CTGGCACAGA ACATTGCCCA GGACCCGACC
AACGCCGAAA CCCTGATGGG CCAGAATGCG CTGATATCCA GCTTCCTTAC CGTGTACCTG
GGCAAGGTCG ACGGCGGTTT CAGCGTGCGC CCCGACGCGA AGATGCCCGA CGGCTATGAC
CCACGTACCC GTCCCTGGTA CAAGGACGGC ATGAGCGCCA GCGGCGCAAC CCTGACCGAA
CCGTACATCG ACATGACCAC CAACAAGATG GTCATCGGTA TCCTCAGCAA GGTCTCCAGC
AGCGTTGGCG TGGTTGGTGG CGACCTGGCC CTGGACGGCC TGGTGCAGAT CATCAACTCG
CTGAACTTCG GCGGCATGGG CTATGCCTTC CTGGTCAACG ACCAGGGCAA GATCCTGGTG
CACCCGGACA AAGACCTGGT GATGAAGTCA CTGTCAGACC TGTTCCCGCA GCACACGCCA
AAACTGACAG GCGAGCTGAC CGAAGTGCAG AGCGATGGCC AGGCCCGCCT GCTGACCTTC
ACCCCGATCA CCGGCTTGCC GTCGGCCAAC TGGTACATCG GTTTGTCGGT GGACAAGAAC
AAGGCCTTCT CGATGCTCAG CACCTTCCGC ACCTCGGCGG TGATCGCCAC GGTAGTGGCG
GTGGTGATCA TCATCGGCCT GCTCGGTTTG CTGATTCGCG TGTTGATGCA GCCGCTGCAC
ACCATGACGC GCGCCATGGA AGACATTGCC GAAGGTGAAG GCGACCTGAC CAAGCGCCTG
CGCATCCACA ACCACGACGA ATTCGGCATC CTCGGCAACG CCTTCAACCG GTTCGTCGAG
CGTATTCACA GCAGCATCCG CGAAGTGTCT TCTGCCACCG AGCAGGTCAA CGAAGTGGCC
CTGCGGGTCA TCAGTGCTTC GAATTCATCG ATGACCAACT CCGACGAGCA GTCCAACCGC
ACCAACAGTG TCGCCGCCGC CATCAACGAG TTGGGCGCCG CCGCTCAGGA AATTGCCGGC
AATGCTGCTC AAGCCTCGCA GCACGCCAGT TCCGCGCGCC TGCTGGCCGA AGAGGGCCAG
CAAGTGGTCG AGCGCAACAT TGCTGCGATG AACCGCCTGT CCGACCTGAT CGTCACGTCC
AGCGAGCACA TCGAAACGCT GAACAGCAAG ACCGTGAATA TCGGCCAGAT CCTCGAAGTG
ATCACCAGCA TCTCCCAGCA GACCAACCTG CTGGCGCTGA ACGCCGCCAT CGAAGCAGCC
CGCGCCGGTG AAGCCGGGCG TGGTTTTGCC GTGGTTGCCG ACGAAGTGCG CAACCTGGCG
CACCGCACCC AGGAATCGGC GCAGCAGGTG CAGACCATGA TCGAAGAGCT GCAGGTCGGT
GCCCGCGAGT CGGTCGACAC CATGGACCAG AGCCAGCGCC ACAGCCAGGA CAGCATGCAG
ATCGCCAACC AGGCCGGTGA GCGGCTGGAC AGCGTGACCG TGCGCATTGG CGAGATCGAT
GGCATGAACC AATCGGTGGC CACTGCCACC GAAGAACAGA CCGCCGTGGT CGAGGCGATC
AACATGGACA TCAACGAGAT CAACATGCTC AACCAGGAAG GCGTGGAAAA CCTGCAGGCG
ACCCTGCGCG CGTGCTCCGA CCTTGAGCAG CAGGCTGGCC GCCTGAAGCA CCTGGTGGGC
AGCTTCCGCA TCTAA
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| Protein sequence | MNKSLRFSHK ILLAASLIVI LAFSLFTLYN DYLQRNAIRE DLENYLAEMG TSTSTNIRNL
FEGRIKLVEN LAQNIAQDPT NAETLMGQNA LISSFLTVYL GKVDGGFSVR PDAKMPDGYD
PRTRPWYKDG MSASGATLTE PYIDMTTNKM VIGILSKVSS SVGVVGGDLA LDGLVQIINS
LNFGGMGYAF LVNDQGKILV HPDKDLVMKS LSDLFPQHTP KLTGELTEVQ SDGQARLLTF
TPITGLPSAN WYIGLSVDKN KAFSMLSTFR TSAVIATVVA VVIIIGLLGL LIRVLMQPLH
TMTRAMEDIA EGEGDLTKRL RIHNHDEFGI LGNAFNRFVE RIHSSIREVS SATEQVNEVA
LRVISASNSS MTNSDEQSNR TNSVAAAINE LGAAAQEIAG NAAQASQHAS SARLLAEEGQ
QVVERNIAAM NRLSDLIVTS SEHIETLNSK TVNIGQILEV ITSISQQTNL LALNAAIEAA
RAGEAGRGFA VVADEVRNLA HRTQESAQQV QTMIEELQVG ARESVDTMDQ SQRHSQDSMQ
IANQAGERLD SVTVRIGEID GMNQSVATAT EEQTAVVEAI NMDINEINML NQEGVENLQA
TLRACSDLEQ QAGRLKHLVG SFRI
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