| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0252 |
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| Symbol | |
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| ID | 6114475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 306764 |
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| End bp | 308635 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641631733 |
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| Product | methyl-accepting chemotaxis sensory transducer with Cache sensor |
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| Protein accession | YP_001758648 |
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| Protein GI | 170724622 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.866394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCTC ACTCGCTTAA GAAAAAAATC TTGTTTTCTG TCGTTATCGC ACTCTCGCTG
GTGATCGTTT TGCTCTCTTG GCAAAGCTAT TTGAGTCAGA AGGAGCAACT ACAGCAAAGT
AGTCTAGAGC AGGTTCAGAG GCTGGGGAGT CAACAAGCCC ATAATATTCA ACAGTGGTTT
GCTGTTCGTG AAAATATAAT CAAAGCCTTG GGCTCACAAT CTCTGTATAA CCCGCTTAAT
CCTTTAAAGC AGGCACAGGT GTCGGGAGAT TTTGAGCTGA CCTATTTTGG CTCAAACGAT
GGCGTGATGT ATGACTCAGA TCCTTCGATT AATCGTGATG GTTATGATCC TCGCAGCCGT
GGTTGGTACC AAGAAGCGAT GAATCAAGGT GGCTTAATTG TGACTAAGCC TTACGTTGAT
GTTGCTTATA ATATTCTTGT TGTGACACTG GCACAGTCAA CCACTGGTGG TGTTGTAGGT
GGGGATTTGC CGATCGCGGG TATTGTCGAT GATATTGAGC GCATGGCGTT GCCAGCAGAT
GGCTACGCTG TGCTAATGCA CAAAGATGGT ACCGTTATCG CTTATAAAAA TGCGGGTAAA
GCGATGCGCC CTGCCTATGA AATTGATAAT GACCTATCAC ATGGATTGCC AGCGATGAGT
CAATCAAGCA ATGCTTTTAC GCCAGCTTAC TTTGAAAGTG AAAGTCGTGA AAAGCTGCTA
TGGGGCGTGA GTATTCCTGA TACCGATTGG GAACTGGTAT TGGTGTTGGA TAGGCAGACG
CTGGAAGCGC CGTTATCTTC ACTCTTGATT AAGCAGTTAG GCCTATCTCT TATCATCTTA
ATTGCCAGTG TATTGGCTAT CTCTGCATTG GTGAATATCT TGCTGGGGCC ACTTTCCAAA
GTATCACAGG CGCTAGCAAA AATTGCCGAT GGTAATGGCG ATCTGACCCA GAGAATTGAG
GTCGAAAGTG ATGATGAGGT GGGTGTACTT GCTGAGAGTT TTAACCGTTT TGTTGGTAGT
CAACATGAGT TAATTACTCA TATTCGTCAG TTAGCAACTG AGTTAGATCT CGATGCTGAG
CGAAGCCTAA ACACGAACCA AGCTGCTGTG CAGGAGTTGC AGAGACAGCA GCAAGAGGTA
GCCATGGTTG CTACCGCGGT GACAGAGATG TCTTGTGCCA CGCAGGAGAT CGCATCAAAT
GCCGAAAATA CAGCCACGGC TGCGCAACAA TCATCATCGA GTAGTGAGCA GGGAAAGAAT
CAGGTTGATC AGACACGCCA CTCGATTAAC TCTCTGGCCA GCGAAGTGAC GCTAGCAACG
GAAGTGATTG GTGATCTTAG TCAACATGCC CAGTCAATCT CAGGGATCTT ATCGACGATT
CAGGGGATAG CAGAGCAGAC TAACCTGTTA GCACTTAATG CCGCGATTGA AGCCGCTAGA
GCAGGTGAAC AGGGGCGCGG ATTTGCTGTG GTAGCCGATG AGGTGCGTGT ATTGTCTCGT
CGAACTCAAG ATTCAACCCA AGAGATCCAC GCTACCATAG AGACTTTACA GCAGATGACG
GCACGAGCGG TGCAGCTAAT GAAAACCAGT CAGGAGTTGG CGGGAAATAG TGTGAACGAT
GCCGATGAGG CTGCGCTGGC ATTAGAGGAG ATAACTCAAG CTGTGTCACT TATCTCTGAC
ATGGCAGGAC AGATAGCGAC AGCTGCAGAG GAACAGACTC AAGTGACCGC TGAGATCACC
CAAAATACCA TAGCGATTAA AGATGTCACC GATGATATTA CTGGTTCGGC TATGGATACC
TTAGAGCATG CTCAACAGCT TAAGCAAAGA GCCAATGACT TAAATACTAA GGTCGCCACT
TTTATTCTAT AA
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| Protein sequence | MKSHSLKKKI LFSVVIALSL VIVLLSWQSY LSQKEQLQQS SLEQVQRLGS QQAHNIQQWF
AVRENIIKAL GSQSLYNPLN PLKQAQVSGD FELTYFGSND GVMYDSDPSI NRDGYDPRSR
GWYQEAMNQG GLIVTKPYVD VAYNILVVTL AQSTTGGVVG GDLPIAGIVD DIERMALPAD
GYAVLMHKDG TVIAYKNAGK AMRPAYEIDN DLSHGLPAMS QSSNAFTPAY FESESREKLL
WGVSIPDTDW ELVLVLDRQT LEAPLSSLLI KQLGLSLIIL IASVLAISAL VNILLGPLSK
VSQALAKIAD GNGDLTQRIE VESDDEVGVL AESFNRFVGS QHELITHIRQ LATELDLDAE
RSLNTNQAAV QELQRQQQEV AMVATAVTEM SCATQEIASN AENTATAAQQ SSSSSEQGKN
QVDQTRHSIN SLASEVTLAT EVIGDLSQHA QSISGILSTI QGIAEQTNLL ALNAAIEAAR
AGEQGRGFAV VADEVRVLSR RTQDSTQEIH ATIETLQQMT ARAVQLMKTS QELAGNSVND
ADEAALALEE ITQAVSLISD MAGQIATAAE EQTQVTAEIT QNTIAIKDVT DDITGSAMDT
LEHAQQLKQR ANDLNTKVAT FIL
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