Gene VIBHAR_04784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04784 
Symbol 
ID5556899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp47162 
End bp49048 
Gene Length1887 bp 
Protein Length628 aa 
Translation table11 
GC content49% 
IMG OID640909263 
Producthistidine kinase 
Protein accessionYP_001446920 
Protein GI156976014 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAAAA ATCTATCTCT AAAGAACAAA CTGGCGATCT CCGCCAGTGC TGCCATCATC 
CTCGGGGGAG TGTTGGTAGA GGGGCTGTCT TTCCGTGATG CTTTGCAAAG ACTTGATGTT
GAAGTCGCTC AGTGCCTAGA AAGTACTAGC GCATCTTACA ACCAATACGT AAGCGACTGG
CTACTATCGA AAGAACGTGC ACTCACATCG CTTTCTCAAG ACGCTGAAAA ATCAGCGATT
GTGACGCACC TTAAGCAGGT TCGCGATTCT GCCGCGTTTG ATAACGTCTT CCTTGCGTAT
CCAGACGGTT CTCAAGACAA CGCGAATGGT GTTGTATTGC CACCGGGTAA CGACGACCCT
CGCCAATGGG GTTGGTACAC CAACGCAATC GCAAACCCTT CGAAAGTCTT TATGGACAAT
CCAACCGTTG CTGCGGCAAC AGGGGCAAAC GTCGTGTCTT TGGGTAAAGC ACTCCAGCTT
CACGGTCAAA CCAACGTGCT AGGTGCAGAC GTAGAAATCG GTGACATCCT AAATAGCCTG
AACCAAGTGA TTCTGCCGGG TGAAGGTTAT ATGTTCATCG CCAACGATCA GGGCAATATC
TTTACCCACA ACAACAGCAA GCTGCTTAAC CAGCCCGTGA GCAAGCTGGG CTTAAATAAC
AGCGACATCG TCGCGGCTGC CAACTCTGGA CAAGAGCGCA CCATCTCCAT CAACGGTAAA
GACTTCGTGG TTTACGCGAA AGCCATCGAT GGCACCAAAT TGACCACAGT AACGGTTCTG
GATAATGACT CTTTGGTCGC CCCACTTTAC GATGCCGTTT GGGGACAAAT CATCGCAACT
ACGATTGTGG TGATCATCTG TGTGGCCTTG TTTAACCTAC TGTGTAACAT CCTTTTCCGT
CCGCTTTACA ACGTGTCAAA TGCCCTATCG CAAATCGCCA ATGGTAGCGG TGATTTAACT
CAGCGCATCA AAGTTGAGAA CCGTGACGAA GTGGGTGAAT TGGCAGAAAA CTTCAACCAG
TTCGTTGCCA GTCTTCAGCA ACTTATCGGC CATATTCGTC ATCAAGCGGA AAACTTAAAC
GATCAATCAG AGCTGAGCAC GAAACGTGCA AACCAATCGG TTGAAGAGCT TAACCACCAG
CAACAAGAAA TCACGCTTGT GGCAACGGCA GTAACGGAAA TGGCTTCTGC GACGCAAGAG
ATCGCTTCTC ACGCTGAACA AACAGCTAAA GTGGCGCAGG ACTCTTCCAT AAGCACACAA
AACGGCCACT CACTGGTAGT GAACACCAAA GACTCGATCA ACAACCTGTC TTCGGAAGTG
AACCAAGCCA GCGGTGTTAT CAGTGAACTG AACCAGCATG CTCAAGACAT CAATACCGTG
CTATCGACCA TTCGTGACAT TGCTGAGCAA ACCAACCTAC TTGCATTGAA CGCTGCGATT
GAAGCAGCAC GTGCAGGCGA ACAAGGCCGC GGTTTTGCTG TGGTTGCGGA TGAAGTTCGT
GTTCTATCGC AACGTACTCA TACTTCGACA GAAGAAATCA AGTCCACCAT CGAGACACTG
CAATGCACAA CTCAGCGTGC CGTTACTTTG ATGGAACGCA GCTCTGAACT GGCAATAGGT
TCGGTAGAAG ATGCCGACCG TGCTTCCCAA GCGCTGGATG AAATCAACTC GGCAGTAGCA
ATGATCAGCG ATATGGCGAC CCAAATCGCC ACCGCCGCAG AAGAACAAAC CCACGTGACC
AATGAAATCA CCCAGAACGT TACTTCCATC AAAGACGTCA CGGATCACTT GGTTATCGGG
GCAGAGGAAT CGATGAATCA GTCGTCTGAG CTGAAATCTC AAGCAGAAGA TCTCAATTCG
AAAGTGGCAA CGTTCAAACT GGCGTAA
 
Protein sequence
MLKNLSLKNK LAISASAAII LGGVLVEGLS FRDALQRLDV EVAQCLESTS ASYNQYVSDW 
LLSKERALTS LSQDAEKSAI VTHLKQVRDS AAFDNVFLAY PDGSQDNANG VVLPPGNDDP
RQWGWYTNAI ANPSKVFMDN PTVAAATGAN VVSLGKALQL HGQTNVLGAD VEIGDILNSL
NQVILPGEGY MFIANDQGNI FTHNNSKLLN QPVSKLGLNN SDIVAAANSG QERTISINGK
DFVVYAKAID GTKLTTVTVL DNDSLVAPLY DAVWGQIIAT TIVVIICVAL FNLLCNILFR
PLYNVSNALS QIANGSGDLT QRIKVENRDE VGELAENFNQ FVASLQQLIG HIRHQAENLN
DQSELSTKRA NQSVEELNHQ QQEITLVATA VTEMASATQE IASHAEQTAK VAQDSSISTQ
NGHSLVVNTK DSINNLSSEV NQASGVISEL NQHAQDINTV LSTIRDIAEQ TNLLALNAAI
EAARAGEQGR GFAVVADEVR VLSQRTHTST EEIKSTIETL QCTTQRAVTL MERSSELAIG
SVEDADRASQ ALDEINSAVA MISDMATQIA TAAEEQTHVT NEITQNVTSI KDVTDHLVIG
AEESMNQSSE LKSQAEDLNS KVATFKLA