Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_04784 |
Symbol | |
ID | 5556899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 47162 |
End bp | 49048 |
Gene Length | 1887 bp |
Protein Length | 628 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640909263 |
Product | histidine kinase |
Protein accession | YP_001446920 |
Protein GI | 156976014 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTTAAAA ATCTATCTCT AAAGAACAAA CTGGCGATCT CCGCCAGTGC TGCCATCATC CTCGGGGGAG TGTTGGTAGA GGGGCTGTCT TTCCGTGATG CTTTGCAAAG ACTTGATGTT GAAGTCGCTC AGTGCCTAGA AAGTACTAGC GCATCTTACA ACCAATACGT AAGCGACTGG CTACTATCGA AAGAACGTGC ACTCACATCG CTTTCTCAAG ACGCTGAAAA ATCAGCGATT GTGACGCACC TTAAGCAGGT TCGCGATTCT GCCGCGTTTG ATAACGTCTT CCTTGCGTAT CCAGACGGTT CTCAAGACAA CGCGAATGGT GTTGTATTGC CACCGGGTAA CGACGACCCT CGCCAATGGG GTTGGTACAC CAACGCAATC GCAAACCCTT CGAAAGTCTT TATGGACAAT CCAACCGTTG CTGCGGCAAC AGGGGCAAAC GTCGTGTCTT TGGGTAAAGC ACTCCAGCTT CACGGTCAAA CCAACGTGCT AGGTGCAGAC GTAGAAATCG GTGACATCCT AAATAGCCTG AACCAAGTGA TTCTGCCGGG TGAAGGTTAT ATGTTCATCG CCAACGATCA GGGCAATATC TTTACCCACA ACAACAGCAA GCTGCTTAAC CAGCCCGTGA GCAAGCTGGG CTTAAATAAC AGCGACATCG TCGCGGCTGC CAACTCTGGA CAAGAGCGCA CCATCTCCAT CAACGGTAAA GACTTCGTGG TTTACGCGAA AGCCATCGAT GGCACCAAAT TGACCACAGT AACGGTTCTG GATAATGACT CTTTGGTCGC CCCACTTTAC GATGCCGTTT GGGGACAAAT CATCGCAACT ACGATTGTGG TGATCATCTG TGTGGCCTTG TTTAACCTAC TGTGTAACAT CCTTTTCCGT CCGCTTTACA ACGTGTCAAA TGCCCTATCG CAAATCGCCA ATGGTAGCGG TGATTTAACT CAGCGCATCA AAGTTGAGAA CCGTGACGAA GTGGGTGAAT TGGCAGAAAA CTTCAACCAG TTCGTTGCCA GTCTTCAGCA ACTTATCGGC CATATTCGTC ATCAAGCGGA AAACTTAAAC GATCAATCAG AGCTGAGCAC GAAACGTGCA AACCAATCGG TTGAAGAGCT TAACCACCAG CAACAAGAAA TCACGCTTGT GGCAACGGCA GTAACGGAAA TGGCTTCTGC GACGCAAGAG ATCGCTTCTC ACGCTGAACA AACAGCTAAA GTGGCGCAGG ACTCTTCCAT AAGCACACAA AACGGCCACT CACTGGTAGT GAACACCAAA GACTCGATCA ACAACCTGTC TTCGGAAGTG AACCAAGCCA GCGGTGTTAT CAGTGAACTG AACCAGCATG CTCAAGACAT CAATACCGTG CTATCGACCA TTCGTGACAT TGCTGAGCAA ACCAACCTAC TTGCATTGAA CGCTGCGATT GAAGCAGCAC GTGCAGGCGA ACAAGGCCGC GGTTTTGCTG TGGTTGCGGA TGAAGTTCGT GTTCTATCGC AACGTACTCA TACTTCGACA GAAGAAATCA AGTCCACCAT CGAGACACTG CAATGCACAA CTCAGCGTGC CGTTACTTTG ATGGAACGCA GCTCTGAACT GGCAATAGGT TCGGTAGAAG ATGCCGACCG TGCTTCCCAA GCGCTGGATG AAATCAACTC GGCAGTAGCA ATGATCAGCG ATATGGCGAC CCAAATCGCC ACCGCCGCAG AAGAACAAAC CCACGTGACC AATGAAATCA CCCAGAACGT TACTTCCATC AAAGACGTCA CGGATCACTT GGTTATCGGG GCAGAGGAAT CGATGAATCA GTCGTCTGAG CTGAAATCTC AAGCAGAAGA TCTCAATTCG AAAGTGGCAA CGTTCAAACT GGCGTAA
|
Protein sequence | MLKNLSLKNK LAISASAAII LGGVLVEGLS FRDALQRLDV EVAQCLESTS ASYNQYVSDW LLSKERALTS LSQDAEKSAI VTHLKQVRDS AAFDNVFLAY PDGSQDNANG VVLPPGNDDP RQWGWYTNAI ANPSKVFMDN PTVAAATGAN VVSLGKALQL HGQTNVLGAD VEIGDILNSL NQVILPGEGY MFIANDQGNI FTHNNSKLLN QPVSKLGLNN SDIVAAANSG QERTISINGK DFVVYAKAID GTKLTTVTVL DNDSLVAPLY DAVWGQIIAT TIVVIICVAL FNLLCNILFR PLYNVSNALS QIANGSGDLT QRIKVENRDE VGELAENFNQ FVASLQQLIG HIRHQAENLN DQSELSTKRA NQSVEELNHQ QQEITLVATA VTEMASATQE IASHAEQTAK VAQDSSISTQ NGHSLVVNTK DSINNLSSEV NQASGVISEL NQHAQDINTV LSTIRDIAEQ TNLLALNAAI EAARAGEQGR GFAVVADEVR VLSQRTHTST EEIKSTIETL QCTTQRAVTL MERSSELAIG SVEDADRASQ ALDEINSAVA MISDMATQIA TAAEEQTHVT NEITQNVTSI KDVTDHLVIG AEESMNQSSE LKSQAEDLNS KVATFKLA
|
| |