More than 300 homologs were found in PanDaTox collection
for query gene VIBHAR_04784 on replicon NC_009784
Organism: Vibrio harveyi ATCC BAA-1116



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  88.85 
 
 
628 aa  1132    Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  100 
 
 
628 aa  1269    Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011313  VSAL_II1022  methyl-accepting chemotaxis protein  76.27 
 
 
628 aa  935    Aliivibrio salmonicida LFI1238  Bacteria  normal  0.771007  n/a   
 
 
-
 
NC_010506  Swoo_0252  methyl-accepting chemotaxis sensory transducer with Cache sensor  44.55 
 
 
623 aa  431  1e-119  Shewanella woodyi ATCC 51908  Bacteria  normal  0.866394  normal 
 
 
-
 
NC_008577  Shewana3_3950  methyl-accepting chemotaxis sensory transducer  43.6 
 
 
623 aa  427  1e-118  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_0323  methyl-accepting chemotaxis sensory transducer  44.08 
 
 
623 aa  423  1e-117  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_1629  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.23 
 
 
623 aa  425  1e-117  Shewanella pealeana ATCC 700345  Bacteria  normal  0.438395  n/a   
 
 
-
 
NC_008321  Shewmr4_3752  methyl-accepting chemotaxis sensory transducer  43.29 
 
 
623 aa  424  1e-117  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3825  methyl-accepting chemotaxis sensory transducer  43.44 
 
 
623 aa  425  1e-117  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0194  methyl-accepting chemotaxis sensory transducer  43.17 
 
 
623 aa  421  1e-116  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4557  methyl-accepting chemotaxis protein  43.6 
 
 
623 aa  422  1e-116  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011663  Sbal223_0194  methyl-accepting chemotaxis sensory transducer with Cache sensor  43.29 
 
 
623 aa  410  1e-113  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_4141  methyl-accepting chemotaxis sensory transducer  43.29 
 
 
623 aa  410  1e-113  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0193  methyl-accepting chemotaxis sensory transducer  43.13 
 
 
623 aa  411  1e-113  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_4274  methyl-accepting chemotaxis sensory transducer with Cache sensor  43.29 
 
 
623 aa  410  1e-113  Shewanella baltica OS195  Bacteria  normal  normal  0.179842 
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  42.03 
 
 
630 aa  397  1e-109  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  42.37 
 
 
630 aa  397  1e-109  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  42.37 
 
 
630 aa  398  1e-109  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  41.88 
 
 
630 aa  395  1e-108  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_01884  hypothetical protein  38.92 
 
 
627 aa  387  1e-106  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_003139  methyl-accepting chemotaxis protein  39.59 
 
 
627 aa  387  1e-106  Vibrio sp. Ex25  Bacteria  normal  0.116124  n/a   
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  38.97 
 
 
633 aa  385  1e-105  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  38.59 
 
 
639 aa  384  1e-105  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  40.25 
 
 
630 aa  379  1e-104  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  41.22 
 
 
630 aa  379  1e-103  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  40.22 
 
 
630 aa  373  1e-102  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  40.22 
 
 
630 aa  372  1e-102  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  36.59 
 
 
630 aa  370  1e-101  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011312  VSAL_I0799  methyl-accepting chemotaxis protein  39.05 
 
 
624 aa  371  1e-101  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3017  methyl-accepting chemotaxis sensory transducer  40.6 
 
 
630 aa  369  1e-100  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  38.23 
 
 
631 aa  348  1e-94  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_00119  methyl-accepting chemotaxis protein  37.75 
 
 
626 aa  347  3e-94  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_1383  methyl-accepting chemotaxis sensory transducer  36.05 
 
 
636 aa  338  1.9999999999999998e-91  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00353653  normal  0.775857 
 
 
-
 
NC_010506  Swoo_0712  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.48 
 
 
627 aa  327  4.0000000000000003e-88  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0412159  hitchhiker  0.0000400753 
 
 
-
 
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.27 
 
 
626 aa  325  2e-87  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.86 
 
 
626 aa  324  3e-87  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  33.66 
 
 
627 aa  293  5e-78  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  31.09 
 
 
632 aa  284  3.0000000000000004e-75  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  31.1 
 
 
632 aa  278  2e-73  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  30.83 
 
 
629 aa  278  2e-73  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  30.83 
 
 
629 aa  277  5e-73  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_009438  Sputcn32_2121  methyl-accepting chemotaxis sensory transducer  35.88 
 
 
622 aa  275  2.0000000000000002e-72  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2364  methyl-accepting chemotaxis sensory transducer  35.09 
 
 
622 aa  273  5.000000000000001e-72  Shewanella baltica OS155  Bacteria  normal  0.493821  n/a   
 
 
-
 
NC_010501  PputW619_0425  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.16 
 
 
630 aa  273  7e-72  Pseudomonas putida W619  Bacteria  normal  0.461628  normal 
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  31.4 
 
 
629 aa  273  1e-71  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  36.25 
 
 
623 aa  271  2.9999999999999997e-71  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  31.14 
 
 
629 aa  269  1e-70  Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_009456  VC0395_0316  methyl-accepting chemotaxis protein  36.36 
 
 
652 aa  268  2e-70  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  32.35 
 
 
630 aa  268  2e-70  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  34.18 
 
 
623 aa  262  1e-68  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  46.22 
 
 
716 aa  261  3e-68  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  30.11 
 
 
625 aa  259  8e-68  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  35.18 
 
 
712 aa  259  1e-67  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_007492  Pfl01_4431  chemotaxis sensory transducer, Cache sensor  30.97 
 
 
629 aa  259  1e-67  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  34.85 
 
 
712 aa  258  2e-67  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  30.36 
 
 
628 aa  258  3e-67  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_009831  Ssed_3477  putative methyl-accepting chemotaxis protein  34.44 
 
 
622 aa  257  6e-67  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000522984 
 
 
-
 
NC_003910  CPS_1439  methyl-accepting chemotaxis protein  30.17 
 
 
641 aa  256  7e-67  Colwellia psychrerythraea 34H  Bacteria  normal  0.336763  n/a   
 
 
-
 
NC_004578  PSPTO_2480  methyl-accepting chemotaxis protein  31.73 
 
 
629 aa  256  1.0000000000000001e-66  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.48 
 
 
628 aa  255  1.0000000000000001e-66  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  30.2 
 
 
643 aa  254  4.0000000000000004e-66  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  35.25 
 
 
713 aa  254  4.0000000000000004e-66  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  29.82 
 
 
626 aa  253  5.000000000000001e-66  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  29.17 
 
 
636 aa  253  8.000000000000001e-66  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  31.1 
 
 
626 aa  253  9.000000000000001e-66  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_009457  VC0395_A1741  methyl-accepting chemotaxis protein  34.91 
 
 
623 aa  252  2e-65  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2544  methyl-accepting chemotaxis sensory transducer  30.49 
 
 
633 aa  251  3e-65  Shewanella baltica OS185  Bacteria  hitchhiker  0.00517521  n/a   
 
 
-
 
NC_007005  Psyr_2246  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  30.77 
 
 
629 aa  251  4e-65  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.265681  normal  0.412954 
 
 
-
 
NC_004578  PSPTO_1061  methyl-accepting chemotaxis protein  30.41 
 
 
626 aa  250  6e-65  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.646209  n/a   
 
 
-
 
NC_007005  Psyr_0906  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  30.36 
 
 
626 aa  250  6e-65  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3534  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  29.83 
 
 
629 aa  249  8e-65  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.667463  normal  0.0882884 
 
 
-
 
NC_012918  GM21_0525  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.28 
 
 
632 aa  249  8e-65  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009831  Ssed_4216  methyl-accepting chemotaxis sensory transducer  29.83 
 
 
647 aa  248  2e-64  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  31.14 
 
 
645 aa  247  6e-64  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_009092  Shew_0237  methyl-accepting chemotaxis sensory transducer  30.05 
 
 
632 aa  246  8e-64  Shewanella loihica PV-4  Bacteria  normal  normal  0.997473 
 
 
-
 
NC_007005  Psyr_2220  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  32.05 
 
 
646 aa  246  9e-64  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.071358  normal  0.520396 
 
 
-
 
NC_007492  Pfl01_0657  chemotaxis sensory transducer, Cache sensor  32.26 
 
 
648 aa  245  1.9999999999999999e-63  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.511779  normal 
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  30.71 
 
 
639 aa  245  1.9999999999999999e-63  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  41.62 
 
 
637 aa  244  3.9999999999999997e-63  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_009831  Ssed_3856  methyl-accepting chemotaxis sensory transducer  33.77 
 
 
640 aa  244  3.9999999999999997e-63  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.825575 
 
 
-
 
NC_011312  VSAL_I2193  methyl-accepting chemotaxis protein  41.14 
 
 
697 aa  243  6e-63  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2448  methyl-accepting chemotaxis protein  31.92 
 
 
646 aa  243  6e-63  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.718596  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  42.02 
 
 
541 aa  242  2e-62  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0130  methyl-accepting chemotaxis sensory transducer  32.4 
 
 
671 aa  241  2.9999999999999997e-62  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1011  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.13 
 
 
624 aa  240  6.999999999999999e-62  Pseudomonas putida W619  Bacteria  normal  0.752503  hitchhiker  0.0000000000251926 
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.67 
 
 
626 aa  240  6.999999999999999e-62  Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_010501  PputW619_4580  methyl-accepting chemotaxis sensory transducer  32.55 
 
 
648 aa  239  8e-62  Pseudomonas putida W619  Bacteria  normal  normal  0.0108713 
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  31.92 
 
 
638 aa  239  8e-62  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  44.85 
 
 
636 aa  239  9e-62  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_008740  Maqu_2346  methyl-accepting chemotaxis sensory transducer  40.5 
 
 
564 aa  239  9e-62  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  30.94 
 
 
645 aa  239  9e-62  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  30.05 
 
 
645 aa  238  2e-61  Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_013457  VEA_001273  methyl-accepting chemotaxis protein  34.19 
 
 
638 aa  238  2e-61  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  28.96 
 
 
638 aa  238  2e-61  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  30.05 
 
 
645 aa  238  3e-61  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_008700  Sama_2880  putative methyl-accepting chemotaxis sensory transducer  35.66 
 
 
558 aa  237  4e-61  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  38.86 
 
 
638 aa  237  6e-61  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_012856  Rpic12D_0523  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.27 
 
 
608 aa  236  1.0000000000000001e-60  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  40.4 
 
 
568 aa  235  2.0000000000000002e-60  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3827  methyl-accepting chemotaxis transducer  38.07 
 
 
695 aa  235  2.0000000000000002e-60  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000221184 
 
 
-
 
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