Gene VEA_001273 details

Gene Information

• Locus tag: VEA_001273
• ID: 8559585
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013457
• Strand: +
• Start bp: 1446975
• End bp: 1448891
• Gene Length: 1917 bp
• Protein Length: 638 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 646408942
• Product: methyl-accepting chemotaxis protein
• Protein accession: YP_003288421
• Protein GI: 262396568
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGAAAC TTCATTCCTT GAGCATCAAA CAGAAGGTTG TACTTGGTAT TACGTTTGCT 
GTTTTAGCAT CAACAATAAT CGTTGGTGTT ATGGCTCAGC GTCATGCAAG AGATGTGTTG 
AGCCACCGTC TTATTGATAT CGAACTACCT GCGATGCTGC AGCAAATCAA TACAGAAATT 
GACCGCGAAG TTGTAGAGAT GCAACAAGCC GCAAAACAGC TCGCAACAAA CGAGTTTATT 
GTCGAAGCCC TATCTAATAC AGACCGCGAC CCGTCGGTAG AAGTTCAGTT AGTTCAGCAG 
CTCAATAACG TTAAATCCCA GTACGGACTT AATGATGCGT CGGTAGCCAA TCGTCAAACG 
GCATATTACT GGAATCAAAA CGGGTTCTTG CGTCAGCTTA ATCGAACTCA AGATGCTTGG 
TTCTTTGGCT TTACGTCTTC TGGTCAAGAA ACGTCAGTGA GCGTTTTCCA AGAGGCAAAC 
GGCGAAGTAA AAATGTTTGC CAACTACCAA GACTTAAATG GTACATCAAT GTCAGGTCTT 
TCAAAGTCGA TGGACGACAT GGTTGCGCTG CTCAATGGGT TTAAAATTGA AGATACGGGT 
TATGTGTTCC TCACTAACGA ACAGGGTGAG ATTCAAATAC ATCGTCAACA AGGTAAAAAC 
CAAACTTCTA TCACCAAGCT ATTTGGTAAT GATGCGAGTG CACTGCTGAA TAAAAACAGC 
TTCAATTTGA TTAATGTGGA ATTTGAAGGG CAGGACACGT TTGTTTCCAG TTTGTATGTT 
CCTTCAATGA ATTGGTTTGT CATTGGTGTA GTTCCTGTCG ATGAAGTCTT CGCGGACCTA 
AATGCTACTG CGCAAAAAAT GCTGTTTACG ACCATCATTG TCGCCGTTGT ATTCATTCTG 
ATGGGCATAT GGTTGGCAAA TAGTATTACT AAACCAATTC GACTGATTGC TGATCGTTTT 
ACCGATCTTG GGCAAGGTGA AGGCGACTTG GCGCAGCGCA TTGAAATTCA GGGTAATGAT 
GAAATTGCTC AGCTTTCAAA AGGCTTCAAC GGATTTATTG AGAAGATCCA CGCCACAATG 
AAAGAAGTTG CTTTAACCAG TGGCTCATTA AGTCAAGCGG CAGAAAGTGT TTCGACGAAA 
GCAACATCCA CACATGACAA CAGCCAAGAG CAGCGTGATC AAACCATTCA AGTTGTTGCG 
GCGATTAACC AGATGGGTGC GACCATCAGC GAAATTGCAT CGAACGCGGC TACTGCTGCC 
GATACGGCAA ATCAGGCTTC TGATAATACT CAAACGGGTC GTGAAGTGGT TATGAAAGCC 
AAAGAGGTGA TTAGCCGCCT AGCTGATGAC GTAGAAACGA CCAATATTGT CGTCACGCAG 
CTGGCATCGA CAACTAAAGA TATTGGCTCG ATTCTGGGCG TAATTCGTGA CATATCAGAA 
CAAACCAACT TGCTTGCGTT GAACGCCGCG ATTGAGGCTG CACGTGCTGG AGAGCAAGGT 
CGTGGTTTTG CAGTGGTTGC TGACGAGGTC AGAAACTTAG CGTCACGCAC GGCTGATTCA 
ACAGAAGAGA TCCAACGGAT GATCAACCAA CTTCAAAGTG ACGCACAAGA CGCAGTAAGT 
GCGATGGAAG CGGGTAAAGC GGTCACTATT GAAGGGGTTG CTTCAACCGA TGAAGCCGTG 
GAAGTGTTAG TCAATATTTC TGAGCGAATT ACAGACATCT CTGATCGTAA TACGCAAGTT 
GCGACGGCGA CGGAAGAGCA ATCCACTGTG GTGCATACCA TTAACCAAAA CATTGAAGAA 
ATCAACGCGA TCAATGAAAT GACAACGGCA ACGGCAGAAG AGCTGGCGGA TGCAAGTCGT 
GATCTTCAAG CGCTCTCTTC ACGTCTGGAC AAGATGGTTG GTAGCTTCAA GCTATAG 

 

Protein sequence

MLKLHSLSIK QKVVLGITFA VLASTIIVGV MAQRHARDVL SHRLIDIELP AMLQQINTEI 
DREVVEMQQA AKQLATNEFI VEALSNTDRD PSVEVQLVQQ LNNVKSQYGL NDASVANRQT 
AYYWNQNGFL RQLNRTQDAW FFGFTSSGQE TSVSVFQEAN GEVKMFANYQ DLNGTSMSGL 
SKSMDDMVAL LNGFKIEDTG YVFLTNEQGE IQIHRQQGKN QTSITKLFGN DASALLNKNS 
FNLINVEFEG QDTFVSSLYV PSMNWFVIGV VPVDEVFADL NATAQKMLFT TIIVAVVFIL 
MGIWLANSIT KPIRLIADRF TDLGQGEGDL AQRIEIQGND EIAQLSKGFN GFIEKIHATM 
KEVALTSGSL SQAAESVSTK ATSTHDNSQE QRDQTIQVVA AINQMGATIS EIASNAATAA 
DTANQASDNT QTGREVVMKA KEVISRLADD VETTNIVVTQ LASTTKDIGS ILGVIRDISE 
QTNLLALNAA IEAARAGEQG RGFAVVADEV RNLASRTADS TEEIQRMINQ LQSDAQDAVS 
AMEAGKAVTI EGVASTDEAV EVLVNISERI TDISDRNTQV ATATEEQSTV VHTINQNIEE 
INAINEMTTA TAEELADASR DLQALSSRLD KMVGSFKL