Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0523 |
Symbol | |
ID | 8018149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 550897 |
End bp | 552723 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644829303 |
Product | methyl-accepting chemotaxis sensory transducer with Cache sensor |
Protein accession | YP_002980501 |
Protein GI | 241662141 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCTCG TAGGAAACCA TACTGTGCTC GCATCCATCC GTACTCGCAT TTTGCTGACC TGCGTTGCCA TCGTGGTCGG CGCCTTGACC TTTGCTGGCG GTCTGAACTA TCTCGTGACG CGTTCGTATA ACGACGAGTC CATCCGCCAG AACCTCCAGT CCGTCGCGCG TGGCCACATC GCCGGCATCG ACGACTGGGT GGCGTCCAAG ACCCAGATGA TGGTGTCGCT GCAAGACGTA GCAGTGTCTG CCGACCCGAT CCCGGTCTTC AAGGCCGTGC ACAAGGCTGG CGGCTTCATC AACGTCTATG TCGGCTATCC CGACAAATCG TACAAATTCT CCAACCCGGA GGGTATTCCG CCGACGTACG ACCCGACCGC GCGCCCCTGG TACAAGCAGG CCGTGGAGGC AGGCAAGCCG GTGGTGACGC CGCCGTACGT AAGCGTCAGC ACCGGCCAGC TGGTGGTGAC GTTCGCCGTG CCCATTCTCG AAGGCAGCAC GCTCAAGGGC GTGATCGGCG GCGACGTGGC GATGGACAGC GTGATTGCCA ACGTCAAGGC CATTCATCCG ACGCCGGCCA GCTTCGGCTT CCTGGTCAAT GCGGCCGGCA AGATCGTCGC GCACCCGAAT GACAAGCTCA CGCTCAAGCC GGTGACCGAT CTGTCGGCCG GGCTGAACGA AGCCACCCTG GCTTCGCTGG CGCAGGCAGA GAAGCCCGTG GAAGTGGCGG TGGATGGCGC GGCCAAGCTG CTCTATCGCC AGGGCGTGAA GGGCACCGAC TGGGGCCTGG TCGTGGCCCT GGACAAGTCC GATGCCACCG CGGGCATGCG CTCGCTGGTG ATGACCTCGA TCGGCGCGCT GGTGGGCGTG GCCATCGTTG CGGCCCTCAT CGTCGGCGCA ATGACTTCGC GCGCATTCCG TCGCCTGTCG ATGATCCGCG ATGCGATGGA CGAGATCGGC TCGGGCAGCG GTGACCTCAC CAAGCGCCTG CCGTCGGATG GCGAAGATGA AGTCGCACAG ATTGCCCGTT CGTTCAACAC GTTCGCCGAC AAGCTGACCG CCGTGATGCA GCAGATCCGC CTGGGCAGCG ATTCGGTGCG CTCGGCCGCG CAGGAAATTG CTGCCGGCAA TGCAGACCTC TCGCAGCGCA CGGAAGAGCA AGCCAGCTCG CTGGAAGAAA CCGCGTCGAG CATGGAAGAG CTCACGAGCA TCGTGAAGCA GAACGCCGAC AACGCACGTC AGGCCAGCCA GCTTGCCGTG ACGGCGTCGG ACGTCGCCAC GCGCGGCGGC GATGTGGTCG GCCAGGTCGT GCAGACCATG GGCGGCATCA ACGAGAGCAG CAAAAAGATC GCCGACATCA TCGGCGTGAT CGAGAGCATT GCGTTCCAGA CCAACATCCT GGCGCTGAAC GCCGCGGTGG AAGCCGCGCG TGCCGGCGAG CAGGGCCGTG GCTTTGCCGT GGTGGCCAGC GAAGTGCGCA GCCTGGCGCA GCGCTCGGCT GGCGCGGCGA AGGAAATCAA GGCGCTGATC CATGACTCGG TAGACCGTGT GAGCAACGGT ACGGCGCTGG TCGATCAGGC CGGCGTGACG ATGGCGGAGA TCGTCGATGC GGTGAAGCGC GTGACCGACA TCATGGGCGA GATTTCGGCC GCCTCGGAAG AGCAGAGCAG CGGCATCGAA CAGGTCAACC AGGCCGTCAA CCAGATGGAC CAGGTGACGC AGCAAAACGC TGCGCTGGTC GAACAAGCCG CCGCCGCCGC GGAGTCGCTC GAAGAACAGG CACACAACCT GAACGAGGCA GTGGGGCAGT TCCGCCTGTC GCACTAA
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Protein sequence | MGLVGNHTVL ASIRTRILLT CVAIVVGALT FAGGLNYLVT RSYNDESIRQ NLQSVARGHI AGIDDWVASK TQMMVSLQDV AVSADPIPVF KAVHKAGGFI NVYVGYPDKS YKFSNPEGIP PTYDPTARPW YKQAVEAGKP VVTPPYVSVS TGQLVVTFAV PILEGSTLKG VIGGDVAMDS VIANVKAIHP TPASFGFLVN AAGKIVAHPN DKLTLKPVTD LSAGLNEATL ASLAQAEKPV EVAVDGAAKL LYRQGVKGTD WGLVVALDKS DATAGMRSLV MTSIGALVGV AIVAALIVGA MTSRAFRRLS MIRDAMDEIG SGSGDLTKRL PSDGEDEVAQ IARSFNTFAD KLTAVMQQIR LGSDSVRSAA QEIAAGNADL SQRTEEQASS LEETASSMEE LTSIVKQNAD NARQASQLAV TASDVATRGG DVVGQVVQTM GGINESSKKI ADIIGVIESI AFQTNILALN AAVEAARAGE QGRGFAVVAS EVRSLAQRSA GAAKEIKALI HDSVDRVSNG TALVDQAGVT MAEIVDAVKR VTDIMGEISA ASEEQSSGIE QVNQAVNQMD QVTQQNAALV EQAAAAAESL EEQAHNLNEA VGQFRLSH
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