Gene Rpic12D_0523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0523 
Symbol 
ID8018149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp550897 
End bp552723 
Gene Length1827 bp 
Protein Length608 aa 
Translation table11 
GC content64% 
IMG OID644829303 
Productmethyl-accepting chemotaxis sensory transducer with Cache sensor 
Protein accessionYP_002980501 
Protein GI241662141 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCTCG TAGGAAACCA TACTGTGCTC GCATCCATCC GTACTCGCAT TTTGCTGACC 
TGCGTTGCCA TCGTGGTCGG CGCCTTGACC TTTGCTGGCG GTCTGAACTA TCTCGTGACG
CGTTCGTATA ACGACGAGTC CATCCGCCAG AACCTCCAGT CCGTCGCGCG TGGCCACATC
GCCGGCATCG ACGACTGGGT GGCGTCCAAG ACCCAGATGA TGGTGTCGCT GCAAGACGTA
GCAGTGTCTG CCGACCCGAT CCCGGTCTTC AAGGCCGTGC ACAAGGCTGG CGGCTTCATC
AACGTCTATG TCGGCTATCC CGACAAATCG TACAAATTCT CCAACCCGGA GGGTATTCCG
CCGACGTACG ACCCGACCGC GCGCCCCTGG TACAAGCAGG CCGTGGAGGC AGGCAAGCCG
GTGGTGACGC CGCCGTACGT AAGCGTCAGC ACCGGCCAGC TGGTGGTGAC GTTCGCCGTG
CCCATTCTCG AAGGCAGCAC GCTCAAGGGC GTGATCGGCG GCGACGTGGC GATGGACAGC
GTGATTGCCA ACGTCAAGGC CATTCATCCG ACGCCGGCCA GCTTCGGCTT CCTGGTCAAT
GCGGCCGGCA AGATCGTCGC GCACCCGAAT GACAAGCTCA CGCTCAAGCC GGTGACCGAT
CTGTCGGCCG GGCTGAACGA AGCCACCCTG GCTTCGCTGG CGCAGGCAGA GAAGCCCGTG
GAAGTGGCGG TGGATGGCGC GGCCAAGCTG CTCTATCGCC AGGGCGTGAA GGGCACCGAC
TGGGGCCTGG TCGTGGCCCT GGACAAGTCC GATGCCACCG CGGGCATGCG CTCGCTGGTG
ATGACCTCGA TCGGCGCGCT GGTGGGCGTG GCCATCGTTG CGGCCCTCAT CGTCGGCGCA
ATGACTTCGC GCGCATTCCG TCGCCTGTCG ATGATCCGCG ATGCGATGGA CGAGATCGGC
TCGGGCAGCG GTGACCTCAC CAAGCGCCTG CCGTCGGATG GCGAAGATGA AGTCGCACAG
ATTGCCCGTT CGTTCAACAC GTTCGCCGAC AAGCTGACCG CCGTGATGCA GCAGATCCGC
CTGGGCAGCG ATTCGGTGCG CTCGGCCGCG CAGGAAATTG CTGCCGGCAA TGCAGACCTC
TCGCAGCGCA CGGAAGAGCA AGCCAGCTCG CTGGAAGAAA CCGCGTCGAG CATGGAAGAG
CTCACGAGCA TCGTGAAGCA GAACGCCGAC AACGCACGTC AGGCCAGCCA GCTTGCCGTG
ACGGCGTCGG ACGTCGCCAC GCGCGGCGGC GATGTGGTCG GCCAGGTCGT GCAGACCATG
GGCGGCATCA ACGAGAGCAG CAAAAAGATC GCCGACATCA TCGGCGTGAT CGAGAGCATT
GCGTTCCAGA CCAACATCCT GGCGCTGAAC GCCGCGGTGG AAGCCGCGCG TGCCGGCGAG
CAGGGCCGTG GCTTTGCCGT GGTGGCCAGC GAAGTGCGCA GCCTGGCGCA GCGCTCGGCT
GGCGCGGCGA AGGAAATCAA GGCGCTGATC CATGACTCGG TAGACCGTGT GAGCAACGGT
ACGGCGCTGG TCGATCAGGC CGGCGTGACG ATGGCGGAGA TCGTCGATGC GGTGAAGCGC
GTGACCGACA TCATGGGCGA GATTTCGGCC GCCTCGGAAG AGCAGAGCAG CGGCATCGAA
CAGGTCAACC AGGCCGTCAA CCAGATGGAC CAGGTGACGC AGCAAAACGC TGCGCTGGTC
GAACAAGCCG CCGCCGCCGC GGAGTCGCTC GAAGAACAGG CACACAACCT GAACGAGGCA
GTGGGGCAGT TCCGCCTGTC GCACTAA
 
Protein sequence
MGLVGNHTVL ASIRTRILLT CVAIVVGALT FAGGLNYLVT RSYNDESIRQ NLQSVARGHI 
AGIDDWVASK TQMMVSLQDV AVSADPIPVF KAVHKAGGFI NVYVGYPDKS YKFSNPEGIP
PTYDPTARPW YKQAVEAGKP VVTPPYVSVS TGQLVVTFAV PILEGSTLKG VIGGDVAMDS
VIANVKAIHP TPASFGFLVN AAGKIVAHPN DKLTLKPVTD LSAGLNEATL ASLAQAEKPV
EVAVDGAAKL LYRQGVKGTD WGLVVALDKS DATAGMRSLV MTSIGALVGV AIVAALIVGA
MTSRAFRRLS MIRDAMDEIG SGSGDLTKRL PSDGEDEVAQ IARSFNTFAD KLTAVMQQIR
LGSDSVRSAA QEIAAGNADL SQRTEEQASS LEETASSMEE LTSIVKQNAD NARQASQLAV
TASDVATRGG DVVGQVVQTM GGINESSKKI ADIIGVIESI AFQTNILALN AAVEAARAGE
QGRGFAVVAS EVRSLAQRSA GAAKEIKALI HDSVDRVSNG TALVDQAGVT MAEIVDAVKR
VTDIMGEISA ASEEQSSGIE QVNQAVNQMD QVTQQNAALV EQAAAAAESL EEQAHNLNEA
VGQFRLSH