More than 300 homologs were found in PanDaTox collection
for query gene Rpic12D_0523 on replicon NC_012856
Organism: Ralstonia pickettii 12D



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012856  Rpic12D_0523  methyl-accepting chemotaxis sensory transducer with Cache sensor  100 
 
 
608 aa  1223    Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc0606  putative methyl-accepting chemotaxis transmembrane protein  88.78 
 
 
617 aa  1026    Ralstonia solanacearum GMI1000  Bacteria  normal  0.535208  normal  0.212062 
 
 
-
 
NC_008785  BMASAVP1_A3471  putative methyl-accepting chemotaxis protein  65.22 
 
 
605 aa  724    Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2894  methyl-accepting chemotaxis protein, putative  65.06 
 
 
605 aa  722    Burkholderia mallei ATCC 23344  Bacteria  normal  0.955347  n/a   
 
 
-
 
NC_007336  Reut_C6319  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  76.17 
 
 
601 aa  909    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0036  methyl-accepting chemotaxis sensory transducer  61.2 
 
 
599 aa  682    Ralstonia eutropha JMP134  Bacteria  normal  0.226397  n/a   
 
 
-
 
NC_007434  BURPS1710b_0112  putative methyl-accepting chemotaxis protein  65.22 
 
 
605 aa  716    Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C6641  methyl-accepting chemotaxis sensory transducer  54.83 
 
 
609 aa  638    Burkholderia sp. 383  Bacteria  normal  normal  0.0855945 
 
 
-
 
NC_010515  Bcenmc03_5980  methyl-accepting chemotaxis sensory transducer with Cache sensor  62.44 
 
 
599 aa  719    Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1642  methyl-accepting chemotaxis sensory transducer  61.44 
 
 
599 aa  707    Burkholderia sp. 383  Bacteria  normal  normal  0.255489 
 
 
-
 
NC_007651  BTH_I3209  methyl-accepting chemotaxis protein, putative  64.89 
 
 
601 aa  726    Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_2718  methyl-accepting chemotaxis sensory transducer with Cache sensor  62.71 
 
 
599 aa  691    Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A1405  methyl-accepting chemotaxis sensory transducer  62.88 
 
 
599 aa  693    Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0536  methyl-accepting chemotaxis sensory transducer with Cache sensor  97.04 
 
 
609 aa  1150    Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_3111  methyl-accepting chemotaxis sensory transducer with Cache sensor  54.26 
 
 
596 aa  637    Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_4247  methyl-accepting chemotaxis sensory transducer with Cache sensor  63.11 
 
 
599 aa  725    Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_3975  methyl-accepting chemotaxis protein  65.22 
 
 
601 aa  715    Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3894  methyl-accepting chemotaxis protein  65.06 
 
 
601 aa  715    Burkholderia pseudomallei 668  Bacteria  normal  0.0518753  n/a   
 
 
-
 
NC_008061  Bcen_3992  methyl-accepting chemotaxis sensory transducer  61.94 
 
 
599 aa  716    Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_3790  methyl-accepting chemotaxis sensory transducer  62.94 
 
 
599 aa  699    Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.178746 
 
 
-
 
NC_010552  BamMC406_4256  methyl-accepting chemotaxis sensory transducer with Cache sensor  62.77 
 
 
599 aa  694    Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.844754 
 
 
-
 
NC_008543  Bcen2424_4375  methyl-accepting chemotaxis sensory transducer  61.94 
 
 
599 aa  716    Burkholderia cenocepacia HI2424  Bacteria  normal  0.480091  normal 
 
 
-
 
NC_010512  Bcenmc03_6304  methyl-accepting chemotaxis sensory transducer with Cache sensor  55.81 
 
 
605 aa  629  1e-179  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.598133  normal 
 
 
-
 
NC_008544  Bcen2424_6698  methyl-accepting chemotaxis sensory transducer  55.81 
 
 
605 aa  629  1e-179  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0770827  normal  0.965565 
 
 
-
 
NC_012880  Dd703_2920  methyl-accepting chemotaxis sensory transducer with Cache sensor  54.92 
 
 
596 aa  628  1e-178  Dickeya dadantii Ech703  Bacteria  normal  0.115472  n/a   
 
 
-
 
NC_010465  YPK_2833  methyl-accepting chemotaxis sensory transducer with Cache sensor  56.19 
 
 
595 aa  623  1e-177  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A1452  methyl-accepting chemotaxis protein  56.19 
 
 
595 aa  623  1e-177  Yersinia pestis Angola  Bacteria  normal  0.19796  normal  0.220045 
 
 
-
 
NC_009708  YpsIP31758_2753  methyl-accepting chemotaxis protein  56.02 
 
 
595 aa  620  1e-176  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0257893  n/a   
 
 
-
 
NC_008836  BMA10229_A1648  putative methyl-accepting chemotaxis protein  66.06 
 
 
776 aa  615  1e-175  Burkholderia mallei NCTC 10229  Bacteria  normal  0.562276  n/a   
 
 
-
 
NC_012917  PC1_1003  methyl-accepting chemotaxis sensory transducer with Cache sensor  53.09 
 
 
596 aa  605  9.999999999999999e-173  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3307  methyl-accepting chemotaxis sensory transducer with Cache sensor  53.26 
 
 
596 aa  606  9.999999999999999e-173  Pectobacterium wasabiae WPP163  Bacteria  normal  0.298951  n/a   
 
 
-
 
NC_008390  Bamb_1247  methyl-accepting chemotaxis sensory transducer  55.63 
 
 
609 aa  606  9.999999999999999e-173  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_1273  methyl-accepting chemotaxis sensory transducer  55.3 
 
 
609 aa  602  1.0000000000000001e-171  Burkholderia ambifaria MC40-6  Bacteria  normal  0.258977  normal  0.0501221 
 
 
-
 
NC_008062  Bcen_6463  methyl-accepting chemotaxis sensory transducer  54.21 
 
 
654 aa  598  1e-170  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc3307  putative methyl-accepting chemotaxis transmembrane protein  52.93 
 
 
646 aa  593  1e-168  Ralstonia solanacearum GMI1000  Bacteria  normal  0.154231  normal 
 
 
-
 
NC_010682  Rpic_3501  methyl-accepting chemotaxis sensory transducer with Cache sensor  53.33 
 
 
600 aa  590  1e-167  Ralstonia pickettii 12J  Bacteria  normal  normal  0.112529 
 
 
-
 
NC_012856  Rpic12D_3176  methyl-accepting chemotaxis sensory transducer with Cache sensor  53.68 
 
 
600 aa  586  1e-166  Ralstonia pickettii 12D  Bacteria  normal  0.0503971  normal 
 
 
-
 
NC_008752  Aave_1100  methyl-accepting chemotaxis sensory transducer  53.34 
 
 
611 aa  578  1e-164  Acidovorax citrulli AAC00-1  Bacteria  normal  0.127748  normal 
 
 
-
 
NC_008752  Aave_0421  methyl-accepting chemotaxis sensory transducer  51.51 
 
 
618 aa  567  1e-160  Acidovorax citrulli AAC00-1  Bacteria  normal  0.627209  normal 
 
 
-
 
NC_010002  Daci_3786  methyl-accepting chemotaxis sensory transducer with Cache sensor  51.92 
 
 
610 aa  558  1e-158  Delftia acidovorans SPH-1  Bacteria  normal  0.0254049  normal  0.3858 
 
 
-
 
NC_009436  Ent638_2328  methyl-accepting chemotaxis sensory transducer  51.34 
 
 
594 aa  558  1e-158  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5136  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  51.75 
 
 
599 aa  554  1e-156  Ralstonia eutropha JMP134  Bacteria  normal  0.481543  n/a   
 
 
-
 
NC_010002  Daci_0582  methyl-accepting chemotaxis sensory transducer  52.17 
 
 
610 aa  547  1e-154  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2088  methyl-accepting chemotaxis sensory transducer with Cache sensor  50.58 
 
 
617 aa  541  9.999999999999999e-153  Acidovorax ebreus TPSY  Bacteria  normal  0.258516  n/a   
 
 
-
 
NC_010002  Daci_3477  methyl-accepting chemotaxis sensory transducer with Cache sensor  49.13 
 
 
606 aa  536  1e-151  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1874  methyl-accepting chemotaxis sensory transducer  48.25 
 
 
597 aa  527  1e-148  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0423277  normal 
 
 
-
 
NC_007963  Csal_0126  methyl-accepting chemotaxis sensory transducer  47.16 
 
 
613 aa  517  1.0000000000000001e-145  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3449  methyl-accepting chemotaxis sensory transducer  47.67 
 
 
632 aa  508  9.999999999999999e-143  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS02605  putative methyl-accepting chemotaxis transducer transmembrane protein  75.43 
 
 
513 aa  369  1e-101  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0414906  normal  0.0642458 
 
 
-
 
NC_003296  RSp0507  methyl-accepting chemotaxis I  69.02 
 
 
600 aa  367  1e-100  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  68.53 
 
 
752 aa  367  1e-100  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_003296  RS03153  putative methyl-accepting chemotaxis transducer transmembrane protein  74.83 
 
 
524 aa  365  2e-99  Ralstonia solanacearum GMI1000  Bacteria  normal  0.471775  normal  0.0817308 
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  66.08 
 
 
551 aa  364  2e-99  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  70.53 
 
 
559 aa  363  3e-99  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_010678  Rpic_4174  methyl-accepting chemotaxis sensory transducer  67.78 
 
 
522 aa  363  4e-99  Ralstonia pickettii 12J  Bacteria  normal  0.0753508  normal 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  62.54 
 
 
542 aa  363  4e-99  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4286  methyl-accepting chemotaxis sensory transducer  67.78 
 
 
522 aa  363  4e-99  Ralstonia pickettii 12D  Bacteria  normal  0.246906  normal  0.38481 
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  80.08 
 
 
513 aa  362  1e-98  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  80.08 
 
 
513 aa  362  1e-98  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  67.14 
 
 
592 aa  360  3e-98  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  73.4 
 
 
615 aa  360  5e-98  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  79.61 
 
 
515 aa  360  5e-98  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  73.4 
 
 
615 aa  360  5e-98  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  79.61 
 
 
515 aa  360  6e-98  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  67.48 
 
 
705 aa  359  6e-98  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  61.93 
 
 
515 aa  358  9.999999999999999e-98  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  66.67 
 
 
583 aa  358  9.999999999999999e-98  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  70.88 
 
 
513 aa  357  5e-97  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  67.49 
 
 
552 aa  356  5.999999999999999e-97  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  67.84 
 
 
797 aa  356  7.999999999999999e-97  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  51.24 
 
 
587 aa  354  2.9999999999999997e-96  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_012857  Rpic12D_3619  methyl-accepting chemotaxis sensory transducer  72.79 
 
 
608 aa  354  2.9999999999999997e-96  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4696  methyl-accepting chemotaxis sensory transducer  72.79 
 
 
608 aa  354  2.9999999999999997e-96  Ralstonia pickettii 12J  Bacteria  normal  0.319993  normal  0.0826606 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  63.11 
 
 
586 aa  353  5.9999999999999994e-96  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_007348  Reut_B5547  methyl-accepting chemotaxis sensory transducer  50.65 
 
 
520 aa  352  1e-95  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  54.08 
 
 
585 aa  352  1e-95  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  55.22 
 
 
519 aa  352  1e-95  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  69.01 
 
 
572 aa  351  3e-95  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  67.13 
 
 
532 aa  350  3e-95  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  67.25 
 
 
775 aa  349  8e-95  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  66.55 
 
 
733 aa  348  1e-94  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  66.43 
 
 
569 aa  348  2e-94  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_003296  RSp1406  methyl-accepting chemotaxis I  70.57 
 
 
608 aa  347  3e-94  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.13211 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  61.4 
 
 
579 aa  347  3e-94  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010717  PXO_00046  chemotaxis protein  65.26 
 
 
753 aa  347  3e-94  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  64.45 
 
 
755 aa  347  4e-94  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  67.62 
 
 
740 aa  346  8e-94  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  67.66 
 
 
680 aa  345  8.999999999999999e-94  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  60.19 
 
 
537 aa  345  1e-93  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  65.61 
 
 
596 aa  344  2e-93  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  66.9 
 
 
793 aa  344  2.9999999999999997e-93  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  58.36 
 
 
527 aa  344  2.9999999999999997e-93  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  65.85 
 
 
622 aa  344  2.9999999999999997e-93  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4163  methyl-accepting chemotaxis sensory transducer  80 
 
 
634 aa  343  4e-93  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4051  methyl-accepting chemotaxis sensory transducer  80 
 
 
634 aa  343  4e-93  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  65.73 
 
 
578 aa  343  4e-93  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  65.26 
 
 
580 aa  343  5e-93  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  66.55 
 
 
598 aa  343  5e-93  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_011071  Smal_1851  methyl-accepting chemotaxis sensory transducer  65.96 
 
 
745 aa  343  5e-93  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195185 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  62.5 
 
 
559 aa  343  5e-93  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
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