Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0443 |
Symbol | |
ID | 4709195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 508335 |
End bp | 509960 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639854902 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001002033 |
Protein GI | 121997246 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTGC TGCGCCGCGT CCACGACATC CGCATCTGGA TCCGCCTGCT CGTCGGCATC TGGCTGATGC TGGTCCTCGC TTGGACGAGC ATGATCGCCT ACGCGGCTTG GGAGCAGCGC AATGTGGCGG TGGATCAGGC CATCGAGTTC ACCGATACGA TGAACCAGAT GACCATGGCC GGCCTCACCG CCATGATGTG GACCAATACC ATGGACCAGC GCCACGAGTT CCTGGATCAG ATCCAGGAAC TGCCCAACGT ATCCGGGCTG CGGGTGCTGC GCGCCGAGCT GACCGAGGAG TGGTACGGGC CCGGCGAGGA AGGGCAACAG CCGCAGGACG AGGTCGAGGC CCAGGTGCTG GAGACCGGTG AGCCCTACAT CGCGCAGATC GACGGCGGGC AAGCCCTGCG GGCGGTCATC CCCAACTTCA ACGAGACGGA CTTCCTCGGC AAGTCCTGCG TCGAGTGCCA TGGCCCGGGC AACGAGGGCG AGGTCCTCGG CGCGGTCACC ATGGAGATCT CCCTTGAGGA CGTGAACCAG GCGGTGATCG GCTTCGGCAC CACGATCTTC GGGATCGCCG TGCTGCTCAG CCTGCCGTTC CTGCTGGTGG TCTACCTCTT CATTCAGCGC TCGGTCACGC GGCCGATCAA CACCATGACC GACAGCCTCA ACGCCATTGC CAGCGGCGGC GGTGATCTCA CCCGGCGGCT GGATGTGCAC AGCGGCGATG AGATCGGTCA GGCGGCCAGC GCCTTCAACC GCTCCATGGC CGTCTTCCAC GACCTCATCG GCCGGGTGGT CGAGATGGCC GAACGCCTGG ATCGTTCCGC CCAGCAGGTT TCCGAGGTCA CCGACCGGAG CAACGACCGC ATCGACCGCC AGCGCTCGGA AATCGAGCAG GTGGCCACGG CGATGAACGA GATGACCTCC ACCGCCCACG AGGTGGCCCG CAACGCCCAG CACGCCGCCG AGGCGACGCA GAGCGGCGAG GATGCGGCCC AGCGCGGCAA GCAGGTGGTG CAGCAGACGG TCAGCGGCAT CAACCAGTTG GCCGATGATG TCTCCCGCGC CGCCGGAGCG ATCCAGAAGC TGGCCGACGA CAGCGAGCAG ATCGGTACGG TGATCGACCT GATCCGCGAG ATCGCCGAGC AGACCAACCT GCTTGCCCTC AACGCCGCCA TTGAGGCGGC CCGGGCCGGC GAACAGGGCC GGGGCTTTGC CGTGGTTGCC GACGAGGTGC GCAAGCTGGC GACGCGCACC CACGAGTCCA CGCAGCAGAT CCAGGACATG ATCAGCGCGC TGCAGGAGGA GACCAAGAGC GCCCAGGCGG CCATGGAGCA AGGCCACGCC CAGACCCAGG AGACGGTGAA CCAGGCCTCC GAGGCCGACG GCGTGCTCGG CGACATCCAG CAATCGGTGA CCACCATCAG TGAGGTGAAC ACCCAGATCG CCAGTGCCGC CGAGGAACAA AGCCAGGTGG TCGAGGAGAT CAACCGCAAC GTCACCTCCA TCAACGACGC GGCCGAGACG ACGGCCCGGG AGAGCCACGA GACGAAGCAG GCCGGCGACG AGCTCGAAGT GCTCGCCCGC GACCTGCGCA AGCTGGTCGA GCAGTTCAAG GTGTGA
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Protein sequence | MKLLRRVHDI RIWIRLLVGI WLMLVLAWTS MIAYAAWEQR NVAVDQAIEF TDTMNQMTMA GLTAMMWTNT MDQRHEFLDQ IQELPNVSGL RVLRAELTEE WYGPGEEGQQ PQDEVEAQVL ETGEPYIAQI DGGQALRAVI PNFNETDFLG KSCVECHGPG NEGEVLGAVT MEISLEDVNQ AVIGFGTTIF GIAVLLSLPF LLVVYLFIQR SVTRPINTMT DSLNAIASGG GDLTRRLDVH SGDEIGQAAS AFNRSMAVFH DLIGRVVEMA ERLDRSAQQV SEVTDRSNDR IDRQRSEIEQ VATAMNEMTS TAHEVARNAQ HAAEATQSGE DAAQRGKQVV QQTVSGINQL ADDVSRAAGA IQKLADDSEQ IGTVIDLIRE IAEQTNLLAL NAAIEAARAG EQGRGFAVVA DEVRKLATRT HESTQQIQDM ISALQEETKS AQAAMEQGHA QTQETVNQAS EADGVLGDIQ QSVTTISEVN TQIASAAEEQ SQVVEEINRN VTSINDAAET TARESHETKQ AGDELEVLAR DLRKLVEQFK V
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