Gene Sden_0099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0099 
Symbol 
ID4017163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp110599 
End bp112518 
Gene Length1920 bp 
Protein Length639 aa 
Translation table11 
GC content47% 
IMG OID637954072 
Productchemotaxis sensory transducer 
Protein accessionYP_561119 
Protein GI91791468 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000152719 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTATT TCAACTCGCT CACCATTAAA CAGAAGATAT TAATGACGGT TGCCTTCGCG 
GTATTACTGT CGACCATTTT AGTCGGTGTT TTGAGCCAGC GCAGCGCTAA AAACGTAATT
GAACAACGTA TGCTGGGATC GGAACTTCCC AGTTTATTAG TGCAAATTCG CAACAAGGTT
GAAATGGACA TCAGCAGCTT AATGAACGCT GCTGAACAAC TGGCCAGCAG TCGTATGTTA
TTACGCTGGC TGCAAGACGG ACGCCCCAGT GGACAAGAAG CCTTAGTCAC ATCCCAACTC
AAAGACTTAA CCTTGCAGTA TGGTCTAGCT CAAGCCTCTT ACGCCGACAG GGAAACGGCC
GCCTATTACA CTCAAGATGG CTTTCTTCGA ATACTCAATC CAGAACAAGA TGGCTGGTTC
TTTGGCTACC GTGATAGCCG CCAAGAAAGA ATGCTCAACG TCTTCACCGA AGCTAATGGT
GAAGTCAAAC TGTTCGTCAA TTACCAGCAA CCTAATGGCC GTGGCTTAGT GGGGCTAGCT
AAATCCCTAG ATGATATGGT GACTTTACTG GCCTCATTTA AAATTGAAAA GTCAGGTTTT
GTGTATCTGG TTGATAAAAC AGGCGCGGTG ACCCTACATC AAAACAAAAG CTTAATAGGT
AAGGCAAAAC TAAATCTACT CTACCCCAAC ATTCAGACCA ATCAACTCTT AAGCCAAAAC
AACTTTAATT TAGTTAAAGC CGATGTCGAT GGCCAACATA TGTTGGTGGC TTCAAGCTAT
ATCCCCTCTA TGGACTGGTA TTTAATCGCC CAAGTCCCTG AGGCTGAGGT GTTTGCTCTG
CTTGAAGAGT CATCCTACCA AATTCTAATT TTAACCATGT TAGTTGCTGG GGCGTTCATC
TTCTTAGCCT TGTTTGTGGC CAGCTCAGTG AGCCGCCCTA TTACCGTTGT GGCGGAAATG
TTCCGTAACA TAGGCGAAGG TGAAGGTGAC TTACGCCAAC GTCTGCCGGT GAAAGGCGAT
GATGAATTAG CGCAACTTGC CAAGGGATTT AATAGCTTTA TCAGTAAGAT CCAAGAGTCT
GTTATCGAAG TGGCACAAAC CAGTGAAGAG CTTGGCCTGT CCGCTAAAGA TGTCTCTGCC
CAAGCTCATC AAACCTTGGA TGACAGCCAA ATTCAAAAAG ATCGCACCAT GATGGTCGTA
ACCGCCATCA ATGAAATGGG CGCCACCGTA AATGAGATTG CTAGCAATGC GGCCCAAGCT
GCTGTGACAG CCAGAGAAGC TGATAAAGGC TCTAGCGAAG GCCAGAGCGT GGTGATCCGC
GCCCGTACGA CCATTAATCA ACTGTCTAAA GACGTTGAGT CTGTGGGTGA AGTGATTGAA
TCTCTCGCCA CCCACACTAA ATCCATTGGC AGCATCTTAG ATGTGATCAG GGCGATTTCA
GAGCAGACTA ATCTATTAGC ATTGAATGCA GCCATTGAAG CCGCAAGGGC TGGAGAAGCG
GGCCGAGGCT TTGCCGTGGT CGCCGATGAA GTACGTAGCT TAGCATCACG TACCGCCGCA
TCGACCAATG AAGTTCAGAC CATGATAGAT AAATTACAAT CTGAAGCCAG CCGCGCCGTC
GATGCCATGA CCCAGAGCCG TTCACGCTCT CGTGAAGGTG TCGCCGCTGT GGATGAAGCG
AGTCAATCAC TCAGTGGTAT TAGTGAGCAA ATTGGTATGA TAAGCGACAT GAATATTCAA
GTCGCTGCAG CGACCGAAGA GCAATCTACT GTAGTTGAGG ACATTAATCG CAACGTCACT
GAAATTAATG ATATTACTCA GCGCACAGCT GAAACTGCCG AAGCTGCTGC TAAAGCGAGT
CAGTCTCTCA ACCAGTTAGC CCTCAGGCTA GATACTTTAG TGGCACGCTT TAAAGTTTAA
 
Protein sequence
MNYFNSLTIK QKILMTVAFA VLLSTILVGV LSQRSAKNVI EQRMLGSELP SLLVQIRNKV 
EMDISSLMNA AEQLASSRML LRWLQDGRPS GQEALVTSQL KDLTLQYGLA QASYADRETA
AYYTQDGFLR ILNPEQDGWF FGYRDSRQER MLNVFTEANG EVKLFVNYQQ PNGRGLVGLA
KSLDDMVTLL ASFKIEKSGF VYLVDKTGAV TLHQNKSLIG KAKLNLLYPN IQTNQLLSQN
NFNLVKADVD GQHMLVASSY IPSMDWYLIA QVPEAEVFAL LEESSYQILI LTMLVAGAFI
FLALFVASSV SRPITVVAEM FRNIGEGEGD LRQRLPVKGD DELAQLAKGF NSFISKIQES
VIEVAQTSEE LGLSAKDVSA QAHQTLDDSQ IQKDRTMMVV TAINEMGATV NEIASNAAQA
AVTAREADKG SSEGQSVVIR ARTTINQLSK DVESVGEVIE SLATHTKSIG SILDVIRAIS
EQTNLLALNA AIEAARAGEA GRGFAVVADE VRSLASRTAA STNEVQTMID KLQSEASRAV
DAMTQSRSRS REGVAAVDEA SQSLSGISEQ IGMISDMNIQ VAAATEEQST VVEDINRNVT
EINDITQRTA ETAEAAAKAS QSLNQLALRL DTLVARFKV