Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0354 |
Symbol | |
ID | 3713402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 403832 |
End bp | 405724 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | chemotaxis sensory transducer, Cache sensor |
Protein accession | YP_346087 |
Protein GI | 77456582 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCAGAA ACATGAAATT CAGCCACAAG ATCTTGTTGG CTGCCGCCCT CGTGGTGGCC GTTGCATTCG CCTGTTTCAT TTTGTTCAAC GACTATCGCC AGCGCGAAGC CCTGCAAAGT AGCACCGAAG CATCGATGCA GGAACTGGGC AGCCTGACCA CCAGCAACAT CCAGACCTGG CTGGAAAGCC GCATCCAGTT GCTGCAATCG ATGTCGCAGC AGGTTGTCGC CGACGGCAAC GCCCCGGCCA GCCTGAAACG CATCATCGAC CTGCCCGCCT ACACCGGCAA TTTCCAGCTC AGCTACTTCG GCGGCGCCGA CGGCGTGATG TTCTCGGTCC CGGCCGGCAA CCGCGCACCG GATTACGACC CGCGCGCCCG TGGCTGGTAC AAGGCCGCCA ACGCTGCGCA ACAGACCATC GTCACCGAAC CGTACATCGC CGCCTCGTCG GGCAAACTGG TGATCACCGT CGCCACGCCG GTACAGCGCC AGGGCCAGAT GATTGGTGTG GCCGGTGCCG ACATTGATCT GTCCAGCGTC AGCGCAATCA TCAACTCACT GAACTTCGGC GGCCACGGCC ATGCGTTCAT CGTCAGCGCC GACGGCAAGA TCCTGATCCA CCCGGACAGC AAGCTGGTAC TCAAGACCCT GGCCGAGGCC TATCCCAACG GCGCGCCGAA CGTCAGCCCG GGCCTGAAAG AAGTCGAGTT CGACGGCAAG ACCCAACTGA TCTCCTTCAC CCGCGTCAAC GGCGTGCCGT CGGCCGACTG GTACGTGGCG CTGGTGCTGG ACAAGGACAC CGCGTTCTCG ATGCTCAGCG AGTTCCGCAC CTCGGCGCTG ATCGCGATGG TCATCGCCGT GGTGATCATC ATCGCCCTGC TCGGCATGCT GATCCGCGTG CTGATGCAGC CGCTGCTGAC CATGGGCCGC GCCATGCACG ACATCGCCGA AGGCGAAGGT GACCTGACCA AACGCCTGAC CATCCACGGC CACGATGAAT TCGGTGCGCT GGGGCTGTCG TTCAACCGTT TCGTCGAGCG CATCCACACC TCGATCCGCG AAGTCTCCTC GGCCACCGGG CAAGTCAACG AAGTCGCGCT GCGCGTGGTC GCGGCGTCGA ACTCGTCGAT GTTCAACTCC GACCAGCAGG CCTCGCGCAC CAATAGCGTG GCCGCCGCGA TCAACCAGCT CGGCGCTGCC GCCCAGGAAA TCGCCCAGAA CGCCGCCCTC GCCTCGCAAC ACTCAAGCGA TGCGCGCAGC CTGGCCGAAG ACGGCCAGCA GGTGGTGGAC AAGACTATCC ACGCGATGCA GCAACTGTCG GCGAAGATCA GCGACTCCTG CGGCAACATC GAAACCCTGA ACAGCAACAC CGTGAACATC GGGCAGATTC TGGAAGTGAT CACCAGCATC TCCCAGCAGA CCAACCTGCT GGCGCTCAAC GCCGCCATCG AAGCGGCCCG TGCCGGTGAA GCCGGTCGTG GTTTCGCCGT GGTGGCCGAC GAAGTCCGCA ACCTGGCACA CCGCACCCAG GATTCGGCGC AGCAAGTGCA GAAGATGATT GAAGAGCTGC AAGTCGGCGC GCGTCAGGCG GTCGGCATCA TGACCGAGAG CCAGCGTGAG AGCGAAAGCA GCGTCGGCAT CGCCAACCAG GCCGGCGAAC GTCTGGGCAG CGTGACCCAG CGCATCGGCG AGATCGACGG CATGAACCAG TCGGTGGCGA CCGCGACGGA AGAGCAGACG GCGGTGGTCG AGTCGATCAA CGTGGATATC AACGAGATCA ATACGCTGAA CCAGGAAGGC GTGGAGAACT TGCAGGCGAC GTTGCGGGCT TGTGCGGATC TGGAGCAGCA GGCTGCGCGA CTCAAGCAGT TGGTGGGTAG TTTCAGAATC TGA
|
Protein sequence | MTRNMKFSHK ILLAAALVVA VAFACFILFN DYRQREALQS STEASMQELG SLTTSNIQTW LESRIQLLQS MSQQVVADGN APASLKRIID LPAYTGNFQL SYFGGADGVM FSVPAGNRAP DYDPRARGWY KAANAAQQTI VTEPYIAASS GKLVITVATP VQRQGQMIGV AGADIDLSSV SAIINSLNFG GHGHAFIVSA DGKILIHPDS KLVLKTLAEA YPNGAPNVSP GLKEVEFDGK TQLISFTRVN GVPSADWYVA LVLDKDTAFS MLSEFRTSAL IAMVIAVVII IALLGMLIRV LMQPLLTMGR AMHDIAEGEG DLTKRLTIHG HDEFGALGLS FNRFVERIHT SIREVSSATG QVNEVALRVV AASNSSMFNS DQQASRTNSV AAAINQLGAA AQEIAQNAAL ASQHSSDARS LAEDGQQVVD KTIHAMQQLS AKISDSCGNI ETLNSNTVNI GQILEVITSI SQQTNLLALN AAIEAARAGE AGRGFAVVAD EVRNLAHRTQ DSAQQVQKMI EELQVGARQA VGIMTESQRE SESSVGIANQ AGERLGSVTQ RIGEIDGMNQ SVATATEEQT AVVESINVDI NEINTLNQEG VENLQATLRA CADLEQQAAR LKQLVGSFRI
|
| |