Gene Pfl01_0354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0354 
Symbol 
ID3713402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp403832 
End bp405724 
Gene Length1893 bp 
Protein Length630 aa 
Translation table11 
GC content63% 
IMG OID 
Productchemotaxis sensory transducer, Cache sensor 
Protein accessionYP_346087 
Protein GI77456582 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGAA ACATGAAATT CAGCCACAAG ATCTTGTTGG CTGCCGCCCT CGTGGTGGCC 
GTTGCATTCG CCTGTTTCAT TTTGTTCAAC GACTATCGCC AGCGCGAAGC CCTGCAAAGT
AGCACCGAAG CATCGATGCA GGAACTGGGC AGCCTGACCA CCAGCAACAT CCAGACCTGG
CTGGAAAGCC GCATCCAGTT GCTGCAATCG ATGTCGCAGC AGGTTGTCGC CGACGGCAAC
GCCCCGGCCA GCCTGAAACG CATCATCGAC CTGCCCGCCT ACACCGGCAA TTTCCAGCTC
AGCTACTTCG GCGGCGCCGA CGGCGTGATG TTCTCGGTCC CGGCCGGCAA CCGCGCACCG
GATTACGACC CGCGCGCCCG TGGCTGGTAC AAGGCCGCCA ACGCTGCGCA ACAGACCATC
GTCACCGAAC CGTACATCGC CGCCTCGTCG GGCAAACTGG TGATCACCGT CGCCACGCCG
GTACAGCGCC AGGGCCAGAT GATTGGTGTG GCCGGTGCCG ACATTGATCT GTCCAGCGTC
AGCGCAATCA TCAACTCACT GAACTTCGGC GGCCACGGCC ATGCGTTCAT CGTCAGCGCC
GACGGCAAGA TCCTGATCCA CCCGGACAGC AAGCTGGTAC TCAAGACCCT GGCCGAGGCC
TATCCCAACG GCGCGCCGAA CGTCAGCCCG GGCCTGAAAG AAGTCGAGTT CGACGGCAAG
ACCCAACTGA TCTCCTTCAC CCGCGTCAAC GGCGTGCCGT CGGCCGACTG GTACGTGGCG
CTGGTGCTGG ACAAGGACAC CGCGTTCTCG ATGCTCAGCG AGTTCCGCAC CTCGGCGCTG
ATCGCGATGG TCATCGCCGT GGTGATCATC ATCGCCCTGC TCGGCATGCT GATCCGCGTG
CTGATGCAGC CGCTGCTGAC CATGGGCCGC GCCATGCACG ACATCGCCGA AGGCGAAGGT
GACCTGACCA AACGCCTGAC CATCCACGGC CACGATGAAT TCGGTGCGCT GGGGCTGTCG
TTCAACCGTT TCGTCGAGCG CATCCACACC TCGATCCGCG AAGTCTCCTC GGCCACCGGG
CAAGTCAACG AAGTCGCGCT GCGCGTGGTC GCGGCGTCGA ACTCGTCGAT GTTCAACTCC
GACCAGCAGG CCTCGCGCAC CAATAGCGTG GCCGCCGCGA TCAACCAGCT CGGCGCTGCC
GCCCAGGAAA TCGCCCAGAA CGCCGCCCTC GCCTCGCAAC ACTCAAGCGA TGCGCGCAGC
CTGGCCGAAG ACGGCCAGCA GGTGGTGGAC AAGACTATCC ACGCGATGCA GCAACTGTCG
GCGAAGATCA GCGACTCCTG CGGCAACATC GAAACCCTGA ACAGCAACAC CGTGAACATC
GGGCAGATTC TGGAAGTGAT CACCAGCATC TCCCAGCAGA CCAACCTGCT GGCGCTCAAC
GCCGCCATCG AAGCGGCCCG TGCCGGTGAA GCCGGTCGTG GTTTCGCCGT GGTGGCCGAC
GAAGTCCGCA ACCTGGCACA CCGCACCCAG GATTCGGCGC AGCAAGTGCA GAAGATGATT
GAAGAGCTGC AAGTCGGCGC GCGTCAGGCG GTCGGCATCA TGACCGAGAG CCAGCGTGAG
AGCGAAAGCA GCGTCGGCAT CGCCAACCAG GCCGGCGAAC GTCTGGGCAG CGTGACCCAG
CGCATCGGCG AGATCGACGG CATGAACCAG TCGGTGGCGA CCGCGACGGA AGAGCAGACG
GCGGTGGTCG AGTCGATCAA CGTGGATATC AACGAGATCA ATACGCTGAA CCAGGAAGGC
GTGGAGAACT TGCAGGCGAC GTTGCGGGCT TGTGCGGATC TGGAGCAGCA GGCTGCGCGA
CTCAAGCAGT TGGTGGGTAG TTTCAGAATC TGA
 
Protein sequence
MTRNMKFSHK ILLAAALVVA VAFACFILFN DYRQREALQS STEASMQELG SLTTSNIQTW 
LESRIQLLQS MSQQVVADGN APASLKRIID LPAYTGNFQL SYFGGADGVM FSVPAGNRAP
DYDPRARGWY KAANAAQQTI VTEPYIAASS GKLVITVATP VQRQGQMIGV AGADIDLSSV
SAIINSLNFG GHGHAFIVSA DGKILIHPDS KLVLKTLAEA YPNGAPNVSP GLKEVEFDGK
TQLISFTRVN GVPSADWYVA LVLDKDTAFS MLSEFRTSAL IAMVIAVVII IALLGMLIRV
LMQPLLTMGR AMHDIAEGEG DLTKRLTIHG HDEFGALGLS FNRFVERIHT SIREVSSATG
QVNEVALRVV AASNSSMFNS DQQASRTNSV AAAINQLGAA AQEIAQNAAL ASQHSSDARS
LAEDGQQVVD KTIHAMQQLS AKISDSCGNI ETLNSNTVNI GQILEVITSI SQQTNLLALN
AAIEAARAGE AGRGFAVVAD EVRNLAHRTQ DSAQQVQKMI EELQVGARQA VGIMTESQRE
SESSVGIANQ AGERLGSVTQ RIGEIDGMNQ SVATATEEQT AVVESINVDI NEINTLNQEG
VENLQATLRA CADLEQQAAR LKQLVGSFRI