More than 300 homologs were found in PanDaTox collection
for query gene Pfl01_0354 on replicon NC_007492
Organism: Pseudomonas fluorescens Pf0-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009656  PSPA7_4877  chemotactic transducer PctB  61.9 
 
 
629 aa  795    Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_002947  PP_1371  methyl-accepting chemotaxis transducer  65.29 
 
 
624 aa  768    Pseudomonas putida KT2440  Bacteria  normal  normal  0.318672 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  58.98 
 
 
643 aa  734    Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_010501  PputW619_0425  methyl-accepting chemotaxis sensory transducer with Cache sensor  75.71 
 
 
630 aa  972    Pseudomonas putida W619  Bacteria  normal  0.461628  normal 
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  58.82 
 
 
628 aa  731    Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_004578  PSPTO_1061  methyl-accepting chemotaxis protein  58.15 
 
 
626 aa  700    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.646209  n/a   
 
 
-
 
NC_004578  PSPTO_2480  methyl-accepting chemotaxis protein  74.04 
 
 
629 aa  919    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0906  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  58.37 
 
 
626 aa  708    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2246  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  72.93 
 
 
629 aa  892    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.265681  normal  0.412954 
 
 
-
 
NC_007005  Psyr_3534  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  61.43 
 
 
629 aa  746    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.667463  normal  0.0882884 
 
 
-
 
NC_009512  Pput_4352  methyl-accepting chemotaxis sensory transducer  65.13 
 
 
624 aa  766    Pseudomonas putida F1  Bacteria  normal  normal  0.0132701 
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  59.17 
 
 
626 aa  748    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  100 
 
 
630 aa  1280    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1011  methyl-accepting chemotaxis sensory transducer with Cache sensor  65.77 
 
 
624 aa  783    Pseudomonas putida W619  Bacteria  normal  0.752503  hitchhiker  0.0000000000251926 
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  59.14 
 
 
628 aa  736    Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  65.82 
 
 
632 aa  837    Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  59.17 
 
 
626 aa  714    Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_007492  Pfl01_4431  chemotaxis sensory transducer, Cache sensor  67.67 
 
 
629 aa  828    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  65.87 
 
 
625 aa  818    Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  61.59 
 
 
629 aa  765    Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_010322  PputGB1_4443  methyl-accepting chemotaxis sensory transducer with Cache sensor  64.98 
 
 
624 aa  764    Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.0000033578 
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  66.3 
 
 
632 aa  843    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  62.54 
 
 
629 aa  781    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  61.9 
 
 
629 aa  797    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  37.19 
 
 
626 aa  385  1e-105  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  35.65 
 
 
627 aa  374  1e-102  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_009052  Sbal_2364  methyl-accepting chemotaxis sensory transducer  35.31 
 
 
622 aa  342  1e-92  Shewanella baltica OS155  Bacteria  normal  0.493821  n/a   
 
 
-
 
NC_009438  Sputcn32_2121  methyl-accepting chemotaxis sensory transducer  34.78 
 
 
622 aa  339  9e-92  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  33.89 
 
 
623 aa  338  1.9999999999999998e-91  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A1741  methyl-accepting chemotaxis protein  36 
 
 
623 aa  337  5e-91  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  35.79 
 
 
630 aa  336  5.999999999999999e-91  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  35.64 
 
 
630 aa  336  7.999999999999999e-91  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  35.64 
 
 
630 aa  336  7.999999999999999e-91  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  33.49 
 
 
623 aa  335  1e-90  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  34.07 
 
 
630 aa  333  4e-90  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.07 
 
 
630 aa  334  4e-90  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  34.07 
 
 
630 aa  333  4e-90  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  34.07 
 
 
630 aa  333  6e-90  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_009456  VC0395_0316  methyl-accepting chemotaxis protein  35.3 
 
 
652 aa  333  7.000000000000001e-90  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  34.71 
 
 
630 aa  330  6e-89  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_3477  putative methyl-accepting chemotaxis protein  32.91 
 
 
622 aa  320  3.9999999999999996e-86  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000522984 
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  31.65 
 
 
630 aa  317  3e-85  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  34.44 
 
 
639 aa  311  2.9999999999999997e-83  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_0988  methyl-accepting chemotaxis protein  30.91 
 
 
695 aa  306  9.000000000000001e-82  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3017  methyl-accepting chemotaxis sensory transducer  33.7 
 
 
630 aa  305  2.0000000000000002e-81  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0525  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.71 
 
 
632 aa  303  7.000000000000001e-81  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009901  Spea_1629  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.96 
 
 
623 aa  302  1e-80  Shewanella pealeana ATCC 700345  Bacteria  normal  0.438395  n/a   
 
 
-
 
NC_011312  VSAL_I0799  methyl-accepting chemotaxis protein  33.33 
 
 
624 aa  302  1e-80  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_0489  methyl-accepting chemotaxis sensory transducer  30.27 
 
 
698 aa  301  2e-80  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.000832175  normal 
 
 
-
 
NC_010506  Swoo_0252  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.18 
 
 
623 aa  299  1e-79  Shewanella woodyi ATCC 51908  Bacteria  normal  0.866394  normal 
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  34.2 
 
 
638 aa  298  1e-79  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_009654  Mmwyl1_1383  methyl-accepting chemotaxis sensory transducer  33.91 
 
 
636 aa  295  1e-78  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00353653  normal  0.775857 
 
 
-
 
NC_009783  VIBHAR_01884  hypothetical protein  34.05 
 
 
627 aa  296  1e-78  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013456  VEA_003139  methyl-accepting chemotaxis protein  33.61 
 
 
627 aa  294  3e-78  Vibrio sp. Ex25  Bacteria  normal  0.116124  n/a   
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  32.13 
 
 
633 aa  292  1e-77  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.64 
 
 
626 aa  292  1e-77  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  37.09 
 
 
638 aa  291  2e-77  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_007908  Rfer_3449  methyl-accepting chemotaxis sensory transducer  32.1 
 
 
632 aa  287  4e-76  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00119  methyl-accepting chemotaxis protein  34.81 
 
 
626 aa  286  5.999999999999999e-76  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_3825  methyl-accepting chemotaxis sensory transducer  32.18 
 
 
623 aa  285  1.0000000000000001e-75  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_4274  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.54 
 
 
623 aa  285  2.0000000000000002e-75  Shewanella baltica OS195  Bacteria  normal  normal  0.179842 
 
 
-
 
NC_011663  Sbal223_0194  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.54 
 
 
623 aa  285  2.0000000000000002e-75  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0193  methyl-accepting chemotaxis sensory transducer  32.86 
 
 
623 aa  285  2.0000000000000002e-75  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_4141  methyl-accepting chemotaxis sensory transducer  32.54 
 
 
623 aa  284  3.0000000000000004e-75  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  33.05 
 
 
631 aa  282  1e-74  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  35.92 
 
 
636 aa  281  2e-74  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0194  methyl-accepting chemotaxis sensory transducer  32.29 
 
 
623 aa  281  3e-74  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0323  methyl-accepting chemotaxis sensory transducer  32.33 
 
 
623 aa  279  1e-73  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_3752  methyl-accepting chemotaxis sensory transducer  31.22 
 
 
623 aa  278  2e-73  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3950  methyl-accepting chemotaxis sensory transducer  31.86 
 
 
623 aa  277  3e-73  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3522  putative methyl-accepting chemotaxis sensory transducer  34.36 
 
 
636 aa  277  5e-73  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4557  methyl-accepting chemotaxis protein  31.28 
 
 
623 aa  276  6e-73  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  35.99 
 
 
638 aa  276  8e-73  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  35.92 
 
 
639 aa  275  2.0000000000000002e-72  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.92 
 
 
626 aa  271  2.9999999999999997e-71  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0712  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.85 
 
 
627 aa  270  5e-71  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0412159  hitchhiker  0.0000400753 
 
 
-
 
NC_007336  Reut_C6319  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  28.82 
 
 
601 aa  270  8e-71  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  34.09 
 
 
645 aa  268  2e-70  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_013457  VEA_001273  methyl-accepting chemotaxis protein  37.2 
 
 
638 aa  267  5e-70  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3750  methyl-accepting chemotaxis sensory transducer  37.7 
 
 
638 aa  266  8e-70  Shewanella sp. MR-7  Bacteria  normal  0.666265  normal  0.186245 
 
 
-
 
NC_008577  Shewana3_0272  methyl-accepting chemotaxis sensory transducer  37.3 
 
 
638 aa  265  2e-69  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00090491  hitchhiker  0.000000349734 
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  30.88 
 
 
628 aa  265  3e-69  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_4247  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.16 
 
 
599 aa  264  4e-69  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1642  methyl-accepting chemotaxis sensory transducer  29.94 
 
 
599 aa  263  6.999999999999999e-69  Burkholderia sp. 383  Bacteria  normal  normal  0.255489 
 
 
-
 
NC_009438  Sputcn32_0387  methyl-accepting chemotaxis sensory transducer  37.64 
 
 
638 aa  262  1e-68  Shewanella putrefaciens CN-32  Bacteria  normal  0.408395  n/a   
 
 
-
 
NC_004347  SO_4454  methyl-accepting chemotaxis protein  37.52 
 
 
642 aa  263  1e-68  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_0271  methyl-accepting chemotaxis sensory transducer  37.48 
 
 
638 aa  263  1e-68  Shewanella sp. MR-4  Bacteria  normal  0.758035  hitchhiker  0.0000678809 
 
 
-
 
NC_009784  VIBHAR_05150  adenylyl cyclase class-3/4/guanylyl cyclase  36.62 
 
 
650 aa  261  2e-68  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_0275  methyl-accepting chemotaxis sensory transducer  34.5 
 
 
638 aa  260  4e-68  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  38.26 
 
 
559 aa  260  4e-68  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0283  methyl-accepting chemotaxis sensory transducer  34.5 
 
 
638 aa  260  4e-68  Shewanella baltica OS195  Bacteria  normal  0.411591  normal 
 
 
-
 
NC_010515  Bcenmc03_5980  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.1 
 
 
599 aa  261  4e-68  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0282  methyl-accepting chemotaxis sensory transducer  34.5 
 
 
641 aa  260  6e-68  Shewanella baltica OS155  Bacteria  normal  0.0149105  n/a   
 
 
-
 
NC_008061  Bcen_3992  methyl-accepting chemotaxis sensory transducer  29.78 
 
 
599 aa  260  7e-68  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4375  methyl-accepting chemotaxis sensory transducer  29.78 
 
 
599 aa  260  7e-68  Burkholderia cenocepacia HI2424  Bacteria  normal  0.480091  normal 
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  34.23 
 
 
645 aa  259  8e-68  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_011663  Sbal223_0279  methyl-accepting chemotaxis sensory transducer  34.5 
 
 
638 aa  259  8e-68  Shewanella baltica OS223  Bacteria  normal  0.983838  normal 
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  34.23 
 
 
645 aa  259  1e-67  Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  31.54 
 
 
628 aa  258  2e-67  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011992  Dtpsy_2088  methyl-accepting chemotaxis sensory transducer with Cache sensor  30 
 
 
617 aa  258  2e-67  Acidovorax ebreus TPSY  Bacteria  normal  0.258516  n/a   
 
 
-
 
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