| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4795 |
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| Symbol | |
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| ID | 6119172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5781208 |
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| End bp | 5783124 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641636376 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001763139 |
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| Protein GI | 170729113 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.884167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000462611 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATTTA ATATGCTCAC CATTAAACAG AAGATACTCC TCACGGTTAC ACTTGCCGTA
CTCCTATCAA CCGCTTTAGT TGGCGTACTC AGCCAGCGCA GCGCAAAACA CGTGGTGGAA
CAGCGAATGC TGACCTCTGA GCTGCCCAAT ATGCTGCAGC AGATCCGCAA CAAGGTTGAG
CTGGATATCA ATAGTTTAAT GAACGCTGCC GAACAGCTGG CTAATAACCA TATGTTGATC
CAATGGTTAG AGAATGATCG CCCGGTTGAA AGCGAGCATT TAGTCACCAA ACAGCTACAG
AGAATTAAGA GTCAATATGG GCTCGCTCAA GCTTCATTTG CCGATAGAGA GACAGCAGCT
TACTACACGC AAGATGGCTT TTTACGCTTA TTAAACCCCT CTCAGGACGG CTGGTTTTTC
GATTATAAAA ACAGTGGCCA AGAGCGCATG CTCAATGTGT TTACCGAAGC CAATGGTGAG
GTAAAACTCT TTATCAATTA TCAGCAACCC AATGGCCGTG GACTGGTGGG ATTAGCTAAG
TCTCTCGATG ATATGGTTGC CCTTTTAGAG TCATTTAAAA TTGAGGAGAC GGGCTTCGTC
TATCTTGTAG ATGCCCAGGG ACAGGTAAAA CTGCATCCCG ACACCAAGCA GATTGGAAAA
AACTCTCTAA GCAACTTCTA CCGTGAAGGG AACACTAATA GTTTACTCAA CCGCAGTGAT
TTTAGCCTGC TAAAAACTGA GGTTGATGGT GAGTCCATGC TAGTAGCCAG TAGTTATATT
CCTTCGATGA ACTGGTACCT TGTTGCTCAA GTCCCAGAGG CTGAAATTTT CGCTCTACTA
CAGGAGTCTG CTTATCAGAT CTTAATCTGG ACCCTATTGA TTGCATGCGC ATTTATTATT
TTAGCCATAT TTGTCGCAGG CTCAGTAAGC CGACCAATCT CAGTTGTCGC CTCCATGTTG
CAAGATATCG GAGAGGGTGA AGGAGATCTT CGTCAGCGTC TTCCTGTAGA GGGAAATGAT
GAGCTGACCT TACTGGCTAA AGGTTTTAAC AGCTTTATCA GTAAGATCCA AAGCTCAATT
ATCGAAGTAA CCGAAACCAG CGAACAACTA AGCCTCTCGG CAAAAGATGT CGCCACTCAG
GCGCAGAAAA CCCTCAGTGA TAGCCAGCTA CAGAAAGATC AAACCCTGAT GGTCGTCGCT
GCAATTAATG AGATGGGCGC AACGGTAAAT GAGATTGCAG GTAGTGCCGC TCAAGCAGCA
GATACCGCAA GAGATGCCGA TACAGAATCC AGTTCAGGTC AGGTGGTTGT ACTGCGCGCT
AAAGACACCA TTAATCAGCT TTCTGGCGAT GTTGAATCTG TTGGCGAGGT GATCGAGTCT
TTAGCCGTTC ACACTAAATC CATCGGCGGT ATTTTAGATG TCATTCGCGC TATATCTGAG
CAGACCAACC TACTTGCCCT GAACGCAGCT ATTGAAGCTG CCCGTGCTGG TGAAGCGGGT
CGTGGTTTTG CAGTGGTGGC CGATGAAGTT AGAAATTTAG CATCACGCAC AGCAACATCC
ACCAACGAAG TTCAGATTAT GATCGATAAG CTACAAGCTG AGGCAAGCAG AGCAGTTGAT
GCTATGTCCC TGAGCCGCTC TCGCTCTCAA GAGGGAGTTA TCGCGGTTGA TGAAGCCAGT
ATGTCTCTTT CAGGGATCAG TGAGCAGATT GGTCAGATCA CAGACATGAA CATTCAAGTT
GCAGCAGCAA CTGAGGAGCA ATCAACGGTT GTTGAAGATA TTAATCGCAA TGTCACAGAG
ATCAATGAGA TAACCCAAAG AACTGCCGAC ACGTCAGAAG CCGTAGCCCA AGCAAGTCAG
TCGTTGAATC AACTGGCTCA TCGTTTGGAT AGTTTAGTGG CAGGTTTTAA GGTGTAA
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| Protein sequence | MKFNMLTIKQ KILLTVTLAV LLSTALVGVL SQRSAKHVVE QRMLTSELPN MLQQIRNKVE
LDINSLMNAA EQLANNHMLI QWLENDRPVE SEHLVTKQLQ RIKSQYGLAQ ASFADRETAA
YYTQDGFLRL LNPSQDGWFF DYKNSGQERM LNVFTEANGE VKLFINYQQP NGRGLVGLAK
SLDDMVALLE SFKIEETGFV YLVDAQGQVK LHPDTKQIGK NSLSNFYREG NTNSLLNRSD
FSLLKTEVDG ESMLVASSYI PSMNWYLVAQ VPEAEIFALL QESAYQILIW TLLIACAFII
LAIFVAGSVS RPISVVASML QDIGEGEGDL RQRLPVEGND ELTLLAKGFN SFISKIQSSI
IEVTETSEQL SLSAKDVATQ AQKTLSDSQL QKDQTLMVVA AINEMGATVN EIAGSAAQAA
DTARDADTES SSGQVVVLRA KDTINQLSGD VESVGEVIES LAVHTKSIGG ILDVIRAISE
QTNLLALNAA IEAARAGEAG RGFAVVADEV RNLASRTATS TNEVQIMIDK LQAEASRAVD
AMSLSRSRSQ EGVIAVDEAS MSLSGISEQI GQITDMNIQV AAATEEQSTV VEDINRNVTE
INEITQRTAD TSEAVAQASQ SLNQLAHRLD SLVAGFKV
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