Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4795 |
Symbol | |
ID | 6119172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 5781208 |
End bp | 5783124 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641636376 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001763139 |
Protein GI | 170729113 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.884167 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000462611 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAATTTA ATATGCTCAC CATTAAACAG AAGATACTCC TCACGGTTAC ACTTGCCGTA CTCCTATCAA CCGCTTTAGT TGGCGTACTC AGCCAGCGCA GCGCAAAACA CGTGGTGGAA CAGCGAATGC TGACCTCTGA GCTGCCCAAT ATGCTGCAGC AGATCCGCAA CAAGGTTGAG CTGGATATCA ATAGTTTAAT GAACGCTGCC GAACAGCTGG CTAATAACCA TATGTTGATC CAATGGTTAG AGAATGATCG CCCGGTTGAA AGCGAGCATT TAGTCACCAA ACAGCTACAG AGAATTAAGA GTCAATATGG GCTCGCTCAA GCTTCATTTG CCGATAGAGA GACAGCAGCT TACTACACGC AAGATGGCTT TTTACGCTTA TTAAACCCCT CTCAGGACGG CTGGTTTTTC GATTATAAAA ACAGTGGCCA AGAGCGCATG CTCAATGTGT TTACCGAAGC CAATGGTGAG GTAAAACTCT TTATCAATTA TCAGCAACCC AATGGCCGTG GACTGGTGGG ATTAGCTAAG TCTCTCGATG ATATGGTTGC CCTTTTAGAG TCATTTAAAA TTGAGGAGAC GGGCTTCGTC TATCTTGTAG ATGCCCAGGG ACAGGTAAAA CTGCATCCCG ACACCAAGCA GATTGGAAAA AACTCTCTAA GCAACTTCTA CCGTGAAGGG AACACTAATA GTTTACTCAA CCGCAGTGAT TTTAGCCTGC TAAAAACTGA GGTTGATGGT GAGTCCATGC TAGTAGCCAG TAGTTATATT CCTTCGATGA ACTGGTACCT TGTTGCTCAA GTCCCAGAGG CTGAAATTTT CGCTCTACTA CAGGAGTCTG CTTATCAGAT CTTAATCTGG ACCCTATTGA TTGCATGCGC ATTTATTATT TTAGCCATAT TTGTCGCAGG CTCAGTAAGC CGACCAATCT CAGTTGTCGC CTCCATGTTG CAAGATATCG GAGAGGGTGA AGGAGATCTT CGTCAGCGTC TTCCTGTAGA GGGAAATGAT GAGCTGACCT TACTGGCTAA AGGTTTTAAC AGCTTTATCA GTAAGATCCA AAGCTCAATT ATCGAAGTAA CCGAAACCAG CGAACAACTA AGCCTCTCGG CAAAAGATGT CGCCACTCAG GCGCAGAAAA CCCTCAGTGA TAGCCAGCTA CAGAAAGATC AAACCCTGAT GGTCGTCGCT GCAATTAATG AGATGGGCGC AACGGTAAAT GAGATTGCAG GTAGTGCCGC TCAAGCAGCA GATACCGCAA GAGATGCCGA TACAGAATCC AGTTCAGGTC AGGTGGTTGT ACTGCGCGCT AAAGACACCA TTAATCAGCT TTCTGGCGAT GTTGAATCTG TTGGCGAGGT GATCGAGTCT TTAGCCGTTC ACACTAAATC CATCGGCGGT ATTTTAGATG TCATTCGCGC TATATCTGAG CAGACCAACC TACTTGCCCT GAACGCAGCT ATTGAAGCTG CCCGTGCTGG TGAAGCGGGT CGTGGTTTTG CAGTGGTGGC CGATGAAGTT AGAAATTTAG CATCACGCAC AGCAACATCC ACCAACGAAG TTCAGATTAT GATCGATAAG CTACAAGCTG AGGCAAGCAG AGCAGTTGAT GCTATGTCCC TGAGCCGCTC TCGCTCTCAA GAGGGAGTTA TCGCGGTTGA TGAAGCCAGT ATGTCTCTTT CAGGGATCAG TGAGCAGATT GGTCAGATCA CAGACATGAA CATTCAAGTT GCAGCAGCAA CTGAGGAGCA ATCAACGGTT GTTGAAGATA TTAATCGCAA TGTCACAGAG ATCAATGAGA TAACCCAAAG AACTGCCGAC ACGTCAGAAG CCGTAGCCCA AGCAAGTCAG TCGTTGAATC AACTGGCTCA TCGTTTGGAT AGTTTAGTGG CAGGTTTTAA GGTGTAA
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Protein sequence | MKFNMLTIKQ KILLTVTLAV LLSTALVGVL SQRSAKHVVE QRMLTSELPN MLQQIRNKVE LDINSLMNAA EQLANNHMLI QWLENDRPVE SEHLVTKQLQ RIKSQYGLAQ ASFADRETAA YYTQDGFLRL LNPSQDGWFF DYKNSGQERM LNVFTEANGE VKLFINYQQP NGRGLVGLAK SLDDMVALLE SFKIEETGFV YLVDAQGQVK LHPDTKQIGK NSLSNFYREG NTNSLLNRSD FSLLKTEVDG ESMLVASSYI PSMNWYLVAQ VPEAEIFALL QESAYQILIW TLLIACAFII LAIFVAGSVS RPISVVASML QDIGEGEGDL RQRLPVEGND ELTLLAKGFN SFISKIQSSI IEVTETSEQL SLSAKDVATQ AQKTLSDSQL QKDQTLMVVA AINEMGATVN EIAGSAAQAA DTARDADTES SSGQVVVLRA KDTINQLSGD VESVGEVIES LAVHTKSIGG ILDVIRAISE QTNLLALNAA IEAARAGEAG RGFAVVADEV RNLASRTATS TNEVQIMIDK LQAEASRAVD AMSLSRSRSQ EGVIAVDEAS MSLSGISEQI GQITDMNIQV AAATEEQSTV VEDINRNVTE INEITQRTAD TSEAVAQASQ SLNQLAHRLD SLVAGFKV
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