Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_3017 |
Symbol | |
ID | 5079759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 3497747 |
End bp | 3499639 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640500215 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001184529 |
Protein GI | 146294105 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGATCCA CACTTAAAAC TCGCCTACTT TTCAGTAGTC TTTCTGCCGT TTTGATCACT GTTGCTGTGT TAGTGAGCAT TTCAAGTTAC TTTATTCGCA ATCATGCATT AGAAAATACT CGACATGAAA TCGACCAACT GGCAAACACT TTTGCTCAAG GTATCGGTTT GTGGATTCAA GATAGAAAAA CTGCGGTTAA CAGCCTTAAA AAAACCATAG AAGCCGAGCC CAGTGTGCAA GTAACCCCCT ATTTGCTTCA AACCCATGAT GCAATGGGGT TTGCGCTCAC TTATTTTGGC GATGAACAAG GTAATATGTA CCGCCAAGAT CCCGCTCTTA ACGTAGCAAA TTTTGATCCA CGTGTTCGCC CTTGGTATAT GGACGCTAAA GCTGCCAATG CCCTAGTAAT GACGGCTCCC TACATCAGCG CAACGCTGAA AAAACAAGTC GTCACTATTG CTGAGCCCGT TATAGTATCA GGCCGACTTT TCGGTGTTGC GGCGGCTAAC TTAACAATCG ATCAGCTAAC AGATGCAGTG CAGCGCTTAC AAGTACCAGG CAAAGGCTAC ACTGTCATGG TCGATAATGC TGGACTCATT ATTAGTCACC CCAATAGCCA GCTTAATACC CAGCAAATGG ATAAAATAGA TAGTAATTTT ACCACTGGCT GGTTATCCAA AAACGCAGTC GTCAATACGA TGGAAGAACG CTATTTAGAC GGCGCAACCA AACTGGTGTA TGTGGCAGCC GTTCCTTCGA CCGATTGGGC GCTGATTTTC GTGATGGATA AGCAGGAGAT CATGTCGCAG GCGACGGATC TCGCCTGGTG GATGTCAATG ATGGGGATCG CACTGTTAAT TCTATTTGGT TTGATTTTAA TTGGTATTTT TAAAATTCAG TTTAAAGATC TCGAACGCGT TGCCCAAGCC CTTAATGATA TTGCCGAAGG TGATGGCGAC TTAACCGTAC GAATTCACAC CGCAAACAGT CACGATGAAA TAGGGATGTT GGCTTCAGGC TTTAACCGCT TTGTGGAACG TCTTCATGGC ATGATCTCCC GCATGCATAA AATTGCGGGG CAACTTGAGT ATCAAGCCCA AGGCAGCAGT GCTTCTGCGA CGGATAATAG TCAACGTATT GCCGTTCAGC AGGATGAAGT GACAATGGTT GCGACTGCAG TTACCGAAAT GGCCAGTGCA ACCGAAGAGA TAGCCAGTAA TGCGGAGCAT ACTGCGCAAA CGGCACAAAA TGCAGTTAGT CTTTCAAATC ATGGCCAAAA ACAAGTAGTA CAGAGCCAGC AATCCATTCG CAACCTAGCG AATGAGGTGG AAACCGCAGG CCGTATCATA GGTGAACTTA ATGAGCACTC GCAGAAGATC AACAGTATTT TGTTGACTAT TAGTGGCATT GCAGAGCAAA CCAACCTGCT CGCCTTAAAC GCGGCGATTG AGGCTGCAAG AGCTGGCGAA CAAGGTCGTG GTTTTGCCGT GGTTGCCGAT GAAGTGCGCG TATTATCGCA ACGAACACAT TCATCGACCC AAGAAATTCA AGCCATGATC GAAACCCTAC AACAAACGGC AGCCAAAGCC GTAAAATCGA TGACACAAAG TCATGGAATG GCAGAAACCA GTGTTGCCGA TGCCAATTCT GCTAGCGAAA GTTTATTGCA AATAAGTAAA GCGATTAATG ATATTTCAGA TATGGCGAGC CAAATTGCCA CTGCCGCCGA GGAACAAACC TCTGTCACCA GTGAGATAAA CCGCAATACA GAGTCTATTC GTGAAGTCTC TGAAAATCTC TCAATTGAGG CACAAACCTC TATGGTTCAA GCACAAGAGC TCGCGCATTT AGCGGCTTCG CTCCAACAGG AAGTAAACCG CTTTAAGCTA TAA
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Protein sequence | MRSTLKTRLL FSSLSAVLIT VAVLVSISSY FIRNHALENT RHEIDQLANT FAQGIGLWIQ DRKTAVNSLK KTIEAEPSVQ VTPYLLQTHD AMGFALTYFG DEQGNMYRQD PALNVANFDP RVRPWYMDAK AANALVMTAP YISATLKKQV VTIAEPVIVS GRLFGVAAAN LTIDQLTDAV QRLQVPGKGY TVMVDNAGLI ISHPNSQLNT QQMDKIDSNF TTGWLSKNAV VNTMEERYLD GATKLVYVAA VPSTDWALIF VMDKQEIMSQ ATDLAWWMSM MGIALLILFG LILIGIFKIQ FKDLERVAQA LNDIAEGDGD LTVRIHTANS HDEIGMLASG FNRFVERLHG MISRMHKIAG QLEYQAQGSS ASATDNSQRI AVQQDEVTMV ATAVTEMASA TEEIASNAEH TAQTAQNAVS LSNHGQKQVV QSQQSIRNLA NEVETAGRII GELNEHSQKI NSILLTISGI AEQTNLLALN AAIEAARAGE QGRGFAVVAD EVRVLSQRTH SSTQEIQAMI ETLQQTAAKA VKSMTQSHGM AETSVADANS ASESLLQISK AINDISDMAS QIATAAEEQT SVTSEINRNT ESIREVSENL SIEAQTSMVQ AQELAHLAAS LQQEVNRFKL
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