More than 300 homologs were found in PanDaTox collection
for query gene Psyr_2246 on replicon NC_007005
Organism: Pseudomonas syringae pv. syringae B728a



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_1371  methyl-accepting chemotaxis transducer  60.35 
 
 
624 aa  704    Pseudomonas putida KT2440  Bacteria  normal  normal  0.318672 
 
 
-
 
NC_009512  Pput_4352  methyl-accepting chemotaxis sensory transducer  60.35 
 
 
624 aa  704    Pseudomonas putida F1  Bacteria  normal  normal  0.0132701 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  54.69 
 
 
643 aa  674    Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  54.69 
 
 
628 aa  676    Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_004578  PSPTO_1061  methyl-accepting chemotaxis protein  54.7 
 
 
626 aa  654    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.646209  n/a   
 
 
-
 
NC_004578  PSPTO_2480  methyl-accepting chemotaxis protein  94.28 
 
 
629 aa  1183    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0906  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  54.39 
 
 
626 aa  649    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2246  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  100 
 
 
629 aa  1275    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.265681  normal  0.412954 
 
 
-
 
NC_007005  Psyr_3534  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  59.62 
 
 
629 aa  701    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.667463  normal  0.0882884 
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  55.48 
 
 
626 aa  682    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  72.93 
 
 
630 aa  907    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1011  methyl-accepting chemotaxis sensory transducer with Cache sensor  60.41 
 
 
624 aa  713    Pseudomonas putida W619  Bacteria  normal  0.752503  hitchhiker  0.0000000000251926 
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  60.79 
 
 
629 aa  745    Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_010501  PputW619_0425  methyl-accepting chemotaxis sensory transducer with Cache sensor  66.56 
 
 
630 aa  838    Pseudomonas putida W619  Bacteria  normal  0.461628  normal 
 
 
-
 
NC_007492  Pfl01_4431  chemotaxis sensory transducer, Cache sensor  61.46 
 
 
629 aa  743    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  54.86 
 
 
626 aa  658    Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  62.4 
 
 
632 aa  783    Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  61.94 
 
 
625 aa  761    Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_010322  PputGB1_4443  methyl-accepting chemotaxis sensory transducer with Cache sensor  60.19 
 
 
624 aa  701    Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.0000033578 
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  61.9 
 
 
629 aa  779    Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  54.53 
 
 
628 aa  675    Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  62.6 
 
 
632 aa  789    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  61.59 
 
 
629 aa  760    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  61.59 
 
 
629 aa  776    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  36.03 
 
 
626 aa  379  1e-104  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  33.97 
 
 
627 aa  355  2e-96  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  35.07 
 
 
630 aa  335  2e-90  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  33.44 
 
 
623 aa  333  5e-90  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  34.76 
 
 
630 aa  330  5.0000000000000004e-89  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  33.96 
 
 
630 aa  330  6e-89  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  34.76 
 
 
630 aa  329  1.0000000000000001e-88  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  31.21 
 
 
623 aa  327  5e-88  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  33.86 
 
 
630 aa  326  7e-88  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.86 
 
 
630 aa  326  7e-88  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  33.86 
 
 
630 aa  326  8.000000000000001e-88  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  33.86 
 
 
630 aa  326  1e-87  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  33.96 
 
 
630 aa  325  2e-87  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_0252  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.14 
 
 
623 aa  321  1.9999999999999998e-86  Shewanella woodyi ATCC 51908  Bacteria  normal  0.866394  normal 
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  33.73 
 
 
639 aa  321  1.9999999999999998e-86  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1741  methyl-accepting chemotaxis protein  35.63 
 
 
623 aa  317  5e-85  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0316  methyl-accepting chemotaxis protein  33.83 
 
 
652 aa  315  1.9999999999999998e-84  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_2364  methyl-accepting chemotaxis sensory transducer  34.88 
 
 
622 aa  314  2.9999999999999996e-84  Shewanella baltica OS155  Bacteria  normal  0.493821  n/a   
 
 
-
 
NC_009901  Spea_1629  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.95 
 
 
623 aa  310  5e-83  Shewanella pealeana ATCC 700345  Bacteria  normal  0.438395  n/a   
 
 
-
 
NC_009831  Ssed_3477  putative methyl-accepting chemotaxis protein  33.49 
 
 
622 aa  309  8e-83  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000522984 
 
 
-
 
NC_009438  Sputcn32_2121  methyl-accepting chemotaxis sensory transducer  35.28 
 
 
622 aa  308  2.0000000000000002e-82  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3825  methyl-accepting chemotaxis sensory transducer  33.59 
 
 
623 aa  304  3.0000000000000004e-81  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_1383  methyl-accepting chemotaxis sensory transducer  33.95 
 
 
636 aa  303  6.000000000000001e-81  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00353653  normal  0.775857 
 
 
-
 
NC_009438  Sputcn32_3017  methyl-accepting chemotaxis sensory transducer  33.44 
 
 
630 aa  301  3e-80  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_3752  methyl-accepting chemotaxis sensory transducer  33.39 
 
 
623 aa  299  1e-79  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3950  methyl-accepting chemotaxis sensory transducer  33.23 
 
 
623 aa  299  1e-79  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_00119  methyl-accepting chemotaxis protein  33.39 
 
 
626 aa  295  1e-78  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_004347  SO_4557  methyl-accepting chemotaxis protein  32.81 
 
 
623 aa  295  1e-78  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_0193  methyl-accepting chemotaxis sensory transducer  34.83 
 
 
623 aa  295  1e-78  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_4274  methyl-accepting chemotaxis sensory transducer with Cache sensor  35 
 
 
623 aa  295  2e-78  Shewanella baltica OS195  Bacteria  normal  normal  0.179842 
 
 
-
 
NC_011663  Sbal223_0194  methyl-accepting chemotaxis sensory transducer with Cache sensor  35 
 
 
623 aa  295  2e-78  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_01884  hypothetical protein  34.44 
 
 
627 aa  295  2e-78  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  33.6 
 
 
633 aa  295  2e-78  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_009665  Shew185_4141  methyl-accepting chemotaxis sensory transducer  35 
 
 
623 aa  295  2e-78  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0323  methyl-accepting chemotaxis sensory transducer  34.72 
 
 
623 aa  293  4e-78  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003139  methyl-accepting chemotaxis protein  34.38 
 
 
627 aa  292  1e-77  Vibrio sp. Ex25  Bacteria  normal  0.116124  n/a   
 
 
-
 
NC_009052  Sbal_0194  methyl-accepting chemotaxis sensory transducer  34.01 
 
 
623 aa  291  2e-77  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  36.75 
 
 
638 aa  289  1e-76  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  33.49 
 
 
636 aa  288  2.9999999999999996e-76  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0525  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.84 
 
 
632 aa  286  7e-76  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007908  Rfer_3449  methyl-accepting chemotaxis sensory transducer  31.9 
 
 
632 aa  286  9e-76  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  36.61 
 
 
638 aa  284  4.0000000000000003e-75  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_011989  Avi_0988  methyl-accepting chemotaxis protein  31.01 
 
 
695 aa  283  6.000000000000001e-75  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.08 
 
 
626 aa  281  4e-74  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I0799  methyl-accepting chemotaxis protein  32.29 
 
 
624 aa  279  9e-74  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  30.46 
 
 
631 aa  279  1e-73  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0712  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.52 
 
 
627 aa  278  2e-73  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0412159  hitchhiker  0.0000400753 
 
 
-
 
NC_008700  Sama_3522  putative methyl-accepting chemotaxis sensory transducer  38.03 
 
 
636 aa  278  2e-73  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  35.47 
 
 
638 aa  278  3e-73  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  31.41 
 
 
628 aa  277  5e-73  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.99 
 
 
626 aa  275  1.0000000000000001e-72  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  32.87 
 
 
639 aa  273  5.000000000000001e-72  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  36.52 
 
 
645 aa  273  9e-72  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  41.11 
 
 
559 aa  271  2e-71  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4454  methyl-accepting chemotaxis protein  38.51 
 
 
642 aa  271  4e-71  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_0271  methyl-accepting chemotaxis sensory transducer  38.35 
 
 
638 aa  270  5.9999999999999995e-71  Shewanella sp. MR-4  Bacteria  normal  0.758035  hitchhiker  0.0000678809 
 
 
-
 
NC_009438  Sputcn32_0387  methyl-accepting chemotaxis sensory transducer  34.38 
 
 
638 aa  270  7e-71  Shewanella putrefaciens CN-32  Bacteria  normal  0.408395  n/a   
 
 
-
 
NC_009665  Shew185_0275  methyl-accepting chemotaxis sensory transducer  33.44 
 
 
638 aa  270  7e-71  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0279  methyl-accepting chemotaxis sensory transducer  33.59 
 
 
638 aa  270  7e-71  Shewanella baltica OS223  Bacteria  normal  0.983838  normal 
 
 
-
 
NC_009997  Sbal195_0283  methyl-accepting chemotaxis sensory transducer  33.44 
 
 
638 aa  270  7e-71  Shewanella baltica OS195  Bacteria  normal  0.411591  normal 
 
 
-
 
NC_009052  Sbal_0282  methyl-accepting chemotaxis sensory transducer  33.44 
 
 
641 aa  270  8e-71  Shewanella baltica OS155  Bacteria  normal  0.0149105  n/a   
 
 
-
 
NC_008322  Shewmr7_3750  methyl-accepting chemotaxis sensory transducer  38.35 
 
 
638 aa  269  1e-70  Shewanella sp. MR-7  Bacteria  normal  0.666265  normal  0.186245 
 
 
-
 
NC_008577  Shewana3_0272  methyl-accepting chemotaxis sensory transducer  37.95 
 
 
638 aa  269  1e-70  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00090491  hitchhiker  0.000000349734 
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  34.98 
 
 
645 aa  267  2.9999999999999995e-70  Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  34.98 
 
 
645 aa  267  5.999999999999999e-70  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  35.19 
 
 
638 aa  266  5.999999999999999e-70  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_4247  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.24 
 
 
599 aa  266  8e-70  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  30.77 
 
 
628 aa  261  2e-68  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007336  Reut_C6319  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  29.81 
 
 
601 aa  260  5.0000000000000005e-68  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0536  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.62 
 
 
609 aa  260  6e-68  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4887  methyl-accepting chemotaxis sensory transducer  31.62 
 
 
645 aa  259  7e-68  Pseudomonas putida W619  Bacteria  normal  normal  0.658451 
 
 
-
 
NC_012856  Rpic12D_0523  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.15 
 
 
608 aa  258  2e-67  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1642  methyl-accepting chemotaxis sensory transducer  29.76 
 
 
599 aa  258  3e-67  Burkholderia sp. 383  Bacteria  normal  normal  0.255489 
 
 
-
 
NC_013457  VEA_001273  methyl-accepting chemotaxis protein  35.61 
 
 
638 aa  258  3e-67  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_2088  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.83 
 
 
617 aa  257  5e-67  Acidovorax ebreus TPSY  Bacteria  normal  0.258516  n/a   
 
 
-
 
NC_010515  Bcenmc03_5980  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.48 
 
 
599 aa  256  8e-67  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
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