More than 300 homologs were found in PanDaTox collection
for query gene Rpic_0536 on replicon NC_010682
Organism: Ralstonia pickettii 12J



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009074  BURPS668_3894  methyl-accepting chemotaxis protein  64.56 
 
 
601 aa  715    Burkholderia pseudomallei 668  Bacteria  normal  0.0518753  n/a   
 
 
-
 
NC_003295  RSc0606  putative methyl-accepting chemotaxis transmembrane protein  88.58 
 
 
617 aa  1020    Ralstonia solanacearum GMI1000  Bacteria  normal  0.535208  normal  0.212062 
 
 
-
 
NC_006348  BMA2894  methyl-accepting chemotaxis protein, putative  64.56 
 
 
605 aa  720    Burkholderia mallei ATCC 23344  Bacteria  normal  0.955347  n/a   
 
 
-
 
NC_012912  Dd1591_3111  methyl-accepting chemotaxis sensory transducer with Cache sensor  54.59 
 
 
596 aa  637    Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5980  methyl-accepting chemotaxis sensory transducer with Cache sensor  62.27 
 
 
599 aa  715    Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007336  Reut_C6319  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  76 
 
 
601 aa  905    Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0036  methyl-accepting chemotaxis sensory transducer  61.2 
 
 
599 aa  681    Ralstonia eutropha JMP134  Bacteria  normal  0.226397  n/a   
 
 
-
 
NC_010086  Bmul_4247  methyl-accepting chemotaxis sensory transducer with Cache sensor  62.6 
 
 
599 aa  719    Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_0523  methyl-accepting chemotaxis sensory transducer with Cache sensor  97.04 
 
 
608 aa  1151    Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_0112  putative methyl-accepting chemotaxis protein  64.73 
 
 
605 aa  715    Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3975  methyl-accepting chemotaxis protein  64.73 
 
 
601 aa  715    Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B1642  methyl-accepting chemotaxis sensory transducer  61.44 
 
 
599 aa  706    Burkholderia sp. 383  Bacteria  normal  normal  0.255489 
 
 
-
 
NC_010682  Rpic_0536  methyl-accepting chemotaxis sensory transducer with Cache sensor  100 
 
 
609 aa  1223    Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I3209  methyl-accepting chemotaxis protein, putative  64.23 
 
 
601 aa  720    Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A1405  methyl-accepting chemotaxis sensory transducer  62.88 
 
 
599 aa  690    Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2718  methyl-accepting chemotaxis sensory transducer with Cache sensor  62.71 
 
 
599 aa  687    Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3992  methyl-accepting chemotaxis sensory transducer  61.77 
 
 
599 aa  712    Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3471  putative methyl-accepting chemotaxis protein  64.73 
 
 
605 aa  721    Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_3790  methyl-accepting chemotaxis sensory transducer  62.6 
 
 
599 aa  695    Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.178746 
 
 
-
 
NC_008543  Bcen2424_4375  methyl-accepting chemotaxis sensory transducer  61.77 
 
 
599 aa  712    Burkholderia cenocepacia HI2424  Bacteria  normal  0.480091  normal 
 
 
-
 
NC_010552  BamMC406_4256  methyl-accepting chemotaxis sensory transducer with Cache sensor  62.44 
 
 
599 aa  690    Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.844754 
 
 
-
 
NC_007509  Bcep18194_C6641  methyl-accepting chemotaxis sensory transducer  54.83 
 
 
609 aa  633  1e-180  Burkholderia sp. 383  Bacteria  normal  normal  0.0855945 
 
 
-
 
NC_008544  Bcen2424_6698  methyl-accepting chemotaxis sensory transducer  56.15 
 
 
605 aa  628  1e-179  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0770827  normal  0.965565 
 
 
-
 
NC_010512  Bcenmc03_6304  methyl-accepting chemotaxis sensory transducer with Cache sensor  56.15 
 
 
605 aa  628  1e-178  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.598133  normal 
 
 
-
 
NC_010465  YPK_2833  methyl-accepting chemotaxis sensory transducer with Cache sensor  56.52 
 
 
595 aa  626  1e-178  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A1452  methyl-accepting chemotaxis protein  56.52 
 
 
595 aa  626  1e-178  Yersinia pestis Angola  Bacteria  normal  0.19796  normal  0.220045 
 
 
-
 
NC_012880  Dd703_2920  methyl-accepting chemotaxis sensory transducer with Cache sensor  55.09 
 
 
596 aa  627  1e-178  Dickeya dadantii Ech703  Bacteria  normal  0.115472  n/a   
 
 
-
 
NC_009708  YpsIP31758_2753  methyl-accepting chemotaxis protein  56.35 
 
 
595 aa  623  1e-177  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0257893  n/a   
 
 
-
 
NC_008836  BMA10229_A1648  putative methyl-accepting chemotaxis protein  65.45 
 
 
776 aa  611  1e-173  Burkholderia mallei NCTC 10229  Bacteria  normal  0.562276  n/a   
 
 
-
 
NC_012917  PC1_1003  methyl-accepting chemotaxis sensory transducer with Cache sensor  53.42 
 
 
596 aa  605  9.999999999999999e-173  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_1273  methyl-accepting chemotaxis sensory transducer  55.63 
 
 
609 aa  603  1.0000000000000001e-171  Burkholderia ambifaria MC40-6  Bacteria  normal  0.258977  normal  0.0501221 
 
 
-
 
NC_008390  Bamb_1247  methyl-accepting chemotaxis sensory transducer  55.63 
 
 
609 aa  603  1.0000000000000001e-171  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3307  methyl-accepting chemotaxis sensory transducer with Cache sensor  52.92 
 
 
596 aa  600  1e-170  Pectobacterium wasabiae WPP163  Bacteria  normal  0.298951  n/a   
 
 
-
 
NC_008062  Bcen_6463  methyl-accepting chemotaxis sensory transducer  54.53 
 
 
654 aa  598  1e-169  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc3307  putative methyl-accepting chemotaxis transmembrane protein  52.93 
 
 
646 aa  589  1e-167  Ralstonia solanacearum GMI1000  Bacteria  normal  0.154231  normal 
 
 
-
 
NC_010682  Rpic_3501  methyl-accepting chemotaxis sensory transducer with Cache sensor  53 
 
 
600 aa  584  1.0000000000000001e-165  Ralstonia pickettii 12J  Bacteria  normal  normal  0.112529 
 
 
-
 
NC_012856  Rpic12D_3176  methyl-accepting chemotaxis sensory transducer with Cache sensor  53.34 
 
 
600 aa  578  1e-164  Ralstonia pickettii 12D  Bacteria  normal  0.0503971  normal 
 
 
-
 
NC_008752  Aave_1100  methyl-accepting chemotaxis sensory transducer  53.34 
 
 
611 aa  576  1.0000000000000001e-163  Acidovorax citrulli AAC00-1  Bacteria  normal  0.127748  normal 
 
 
-
 
NC_008752  Aave_0421  methyl-accepting chemotaxis sensory transducer  51.67 
 
 
618 aa  572  1.0000000000000001e-162  Acidovorax citrulli AAC00-1  Bacteria  normal  0.627209  normal 
 
 
-
 
NC_009436  Ent638_2328  methyl-accepting chemotaxis sensory transducer  52.27 
 
 
594 aa  562  1.0000000000000001e-159  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3786  methyl-accepting chemotaxis sensory transducer with Cache sensor  51.59 
 
 
610 aa  555  1e-157  Delftia acidovorans SPH-1  Bacteria  normal  0.0254049  normal  0.3858 
 
 
-
 
NC_007348  Reut_B5136  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  51.75 
 
 
599 aa  554  1e-156  Ralstonia eutropha JMP134  Bacteria  normal  0.481543  n/a   
 
 
-
 
NC_010002  Daci_3477  methyl-accepting chemotaxis sensory transducer with Cache sensor  50.17 
 
 
606 aa  549  1e-155  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_0582  methyl-accepting chemotaxis sensory transducer  51.84 
 
 
610 aa  542  1e-153  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2088  methyl-accepting chemotaxis sensory transducer with Cache sensor  50.91 
 
 
617 aa  541  9.999999999999999e-153  Acidovorax ebreus TPSY  Bacteria  normal  0.258516  n/a   
 
 
-
 
NC_008752  Aave_1874  methyl-accepting chemotaxis sensory transducer  48.08 
 
 
597 aa  521  1e-146  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0423277  normal 
 
 
-
 
NC_007963  Csal_0126  methyl-accepting chemotaxis sensory transducer  47.16 
 
 
613 aa  516  1.0000000000000001e-145  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3449  methyl-accepting chemotaxis sensory transducer  47.67 
 
 
632 aa  504  1e-141  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS02605  putative methyl-accepting chemotaxis transducer transmembrane protein  75.09 
 
 
513 aa  367  1e-100  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0414906  normal  0.0642458 
 
 
-
 
NC_003296  RSp0507  methyl-accepting chemotaxis I  68.4 
 
 
600 aa  367  1e-100  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  68.53 
 
 
752 aa  366  1e-100  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_003296  RS03153  putative methyl-accepting chemotaxis transducer transmembrane protein  74.83 
 
 
524 aa  364  2e-99  Ralstonia solanacearum GMI1000  Bacteria  normal  0.471775  normal  0.0817308 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  70.18 
 
 
559 aa  362  8e-99  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  74.11 
 
 
615 aa  362  1e-98  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4174  methyl-accepting chemotaxis sensory transducer  67.48 
 
 
522 aa  362  1e-98  Ralstonia pickettii 12J  Bacteria  normal  0.0753508  normal 
 
 
-
 
NC_012857  Rpic12D_4286  methyl-accepting chemotaxis sensory transducer  67.48 
 
 
522 aa  362  1e-98  Ralstonia pickettii 12D  Bacteria  normal  0.246906  normal  0.38481 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  74.11 
 
 
615 aa  362  1e-98  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  80 
 
 
515 aa  360  3e-98  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  80 
 
 
515 aa  360  4e-98  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  79.69 
 
 
513 aa  360  4e-98  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  79.69 
 
 
513 aa  360  4e-98  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  65.09 
 
 
551 aa  360  6e-98  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  62.47 
 
 
515 aa  359  9e-98  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  67.14 
 
 
592 aa  359  9e-98  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  67.48 
 
 
705 aa  358  9.999999999999999e-98  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  61.61 
 
 
542 aa  357  5e-97  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  66.67 
 
 
583 aa  357  5e-97  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  67.84 
 
 
797 aa  356  8.999999999999999e-97  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  67.14 
 
 
552 aa  354  2e-96  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  70.53 
 
 
513 aa  355  2e-96  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_3619  methyl-accepting chemotaxis sensory transducer  72.44 
 
 
608 aa  351  2e-95  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4696  methyl-accepting chemotaxis sensory transducer  72.44 
 
 
608 aa  351  2e-95  Ralstonia pickettii 12J  Bacteria  normal  0.319993  normal  0.0826606 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  62.8 
 
 
586 aa  350  3e-95  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  54.95 
 
 
519 aa  350  4e-95  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  61.7 
 
 
579 aa  350  5e-95  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007348  Reut_B5547  methyl-accepting chemotaxis sensory transducer  58.36 
 
 
520 aa  348  1e-94  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  58.24 
 
 
587 aa  348  1e-94  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  66.78 
 
 
532 aa  348  1e-94  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  66.55 
 
 
733 aa  348  1e-94  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  68.66 
 
 
572 aa  348  2e-94  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_010717  PXO_00046  chemotaxis protein  65.61 
 
 
753 aa  348  2e-94  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RSp1406  methyl-accepting chemotaxis I  70.57 
 
 
608 aa  347  3e-94  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.13211 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  66.08 
 
 
569 aa  347  4e-94  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  67.66 
 
 
680 aa  345  8.999999999999999e-94  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  55.15 
 
 
585 aa  346  8.999999999999999e-94  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_010717  PXO_00039  chemotaxis protein  66.55 
 
 
775 aa  346  8.999999999999999e-94  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.371493  n/a   
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  67.62 
 
 
740 aa  345  1e-93  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  60.19 
 
 
537 aa  344  2.9999999999999997e-93  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  65.96 
 
 
755 aa  344  2.9999999999999997e-93  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  66.2 
 
 
598 aa  343  5.999999999999999e-93  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  58.61 
 
 
566 aa  342  8e-93  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  70.67 
 
 
559 aa  342  9e-93  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  66.55 
 
 
793 aa  342  9e-93  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_010678  Rpic_4051  methyl-accepting chemotaxis sensory transducer  79.61 
 
 
634 aa  342  1e-92  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  64.91 
 
 
580 aa  342  1e-92  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4163  methyl-accepting chemotaxis sensory transducer  79.61 
 
 
634 aa  342  1e-92  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  65.38 
 
 
578 aa  342  1e-92  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  65.14 
 
 
527 aa  341  2e-92  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  65.26 
 
 
596 aa  341  2e-92  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  69.96 
 
 
577 aa  341  2.9999999999999998e-92  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
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