| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_1102 |
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| Symbol | |
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| ID | 5134990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009456 |
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| Strand | - |
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| Start bp | 1066194 |
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| End bp | 1068110 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640531424 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_001215938 |
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| Protein GI | 147671891 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAAAC TGCATCAGAT GAGTATTAAG CAAAAGGTTG TGTTAGGGGT CACTCTCGCC
GTACTGGCAT CCACCCTGAT TGTGGGTGTG ATGGCACAGC GCCAAGCGCG AGAGGTGCTA
GAGCATCGCT TAGTCGATTT AGAACTGCCC AATATTTTGA AGTTGATTAA AAGCGATATT
GACCATGAAG TGCTACAACT GCTTGCTTCT GCTCGGCAAA TTGCCAGCAA TGAGTTTGTG
CAGCAAGCGA TTGCTACCAC AGAAAGAGAT CCGGCAACAG AAGCGTTATT AGTGAAGCAG
TTGAACAACT TACGCGATCA ATACCGCCTG AATGATGCGT CGGTAGCCAA CCGAAAAACG
GCGTATTACT GGAACCAAAA CGGTTTTCTG CGCGAGCTGA ATCAGCAGCA AGACGGGTGG
TTTTTTGGCT TTATCGGCTC AGGAAAGCCG ACCATGGTCA GCATGTTCCA AGAGGCGAAT
GGCGAAGTCA AAATGTTTGC CAACTACCAG TTGGTGAATG GCAATACCAT GTCTGGTATG
TCTAAGTCGA TGGATGACAT GGTGCGTCTG CTTAACAGTT TTAAAATCGA AGACACCGGT
TTTGTGTTTT TGACCAATGC ACAGGGTGAG GTACAAATCC ATCGGCAGAA AGAGCAAGTG
AAATCGAGCT TGCAGCAAAT TTATGGTTCA GGGGCGAGTG CGCTGCTGAA CAAATCCGGC
TTCAACTTGA TTTCGACGGA CTATCAAGGT GAAGAAGTGA TGGTAGCGAG CATTTACATC
GAGAGCATGG ACTGGTTCTT GGTCGGTACC GTGCCTGTGC ATGAGGTGTT TGCGGAATTG
GATGCCGTAG CACAGCGTAT GATGCTCACG ACGCTGGCGG TAGCTGCCAT CTTTATTTTT
ATGGGGATTT TCCTGGCTAA CAGTATCGCT ATGCCGATCA ATCAGATTGC CAAACGCTTT
ACCGATTTGG GCAGAGGGGA TGGTGATCTC TCGCAGCGTA TTGAAGTGAA AGGCAATGAT
GAAATCGCTC AGCTTTCCAA AGGCTTTAAT GGCTTTATTG AGAAGATCCA TCAATCGATA
AAAGACGTTG CCCAAACCAG CCGTGAGTTG CAAGTGGCTG CCGAAGGGGT ATCGCGCAAA
GCGTTAGTCA CCCACGATAA TAGCCAGCAG CAGCGCGACC AAACGATCCA AGTGGTTACC
GCCATTAACC AAATGGGGGC GACGATCAGT GAAATCGCTT CTAATGCGGC GACCGCAGCC
GAAACGGCGA ATCAAGCGTC TGGTAATGCG GATCAAGGGC GTAATGTCGT CAATAAAGCC
AAAGAGGCGA TCAGCCGCTT AGCTCACGAT ATTGAAAACA CGGGCAAAGT GGTGGAGCAA
TTGGCGTCGA CCACTCAAGA GATTGGGTCG ATTTTGGATG CGATCCGCGG TATTTCAGAG
CAAACCAACT TGCTGGCACT GAACGCGGCG ATTGAAGCCG CCCGTGCTGG CGATCAAGGC
CGCGGTTTTG CGGTGGTGGC CGATGAAGTG CGTAACTTAG CGAGTCGTAC GGCATCCTCG
ACGGAAGAAA TTCAGAAGAT GATTAACCAG CTGCAAAATG ATGCTAAGAA TGCTGTATCG
GCAATGGATG CGGGTAAAAC GGTGACTCAT CAAGGGGTTG CCGCTTCTGA TGAGGCAGTA
CAGGTGCTGA TGAGTATTTC GGATCGAATC CACGATATTT CAGATCGCAA CACACAAGTC
GCTACAGCAA CCGAAGAGCA ATCGACCGTT GTACACACCA TTAACCAAAA TATCGAAGAG
ATTAACGCGA TTAATGAAGT GACCACTTCA ACGGCAGAAG AGCTGGCTGA TGCGAGCAAA
TCATTGCGTG AACTCTCTGG CCGTTTAGAT AAGTTGGTGG GCAACTTTAA ACTCTAG
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| Protein sequence | MFKLHQMSIK QKVVLGVTLA VLASTLIVGV MAQRQAREVL EHRLVDLELP NILKLIKSDI
DHEVLQLLAS ARQIASNEFV QQAIATTERD PATEALLVKQ LNNLRDQYRL NDASVANRKT
AYYWNQNGFL RELNQQQDGW FFGFIGSGKP TMVSMFQEAN GEVKMFANYQ LVNGNTMSGM
SKSMDDMVRL LNSFKIEDTG FVFLTNAQGE VQIHRQKEQV KSSLQQIYGS GASALLNKSG
FNLISTDYQG EEVMVASIYI ESMDWFLVGT VPVHEVFAEL DAVAQRMMLT TLAVAAIFIF
MGIFLANSIA MPINQIAKRF TDLGRGDGDL SQRIEVKGND EIAQLSKGFN GFIEKIHQSI
KDVAQTSREL QVAAEGVSRK ALVTHDNSQQ QRDQTIQVVT AINQMGATIS EIASNAATAA
ETANQASGNA DQGRNVVNKA KEAISRLAHD IENTGKVVEQ LASTTQEIGS ILDAIRGISE
QTNLLALNAA IEAARAGDQG RGFAVVADEV RNLASRTASS TEEIQKMINQ LQNDAKNAVS
AMDAGKTVTH QGVAASDEAV QVLMSISDRI HDISDRNTQV ATATEEQSTV VHTINQNIEE
INAINEVTTS TAEELADASK SLRELSGRLD KLVGNFKL
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