| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0085 |
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| Symbol | |
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| ID | 4920484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 97414 |
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| End bp | 99330 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640161596 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001092216 |
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| Protein GI | 127511019 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0647334 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTAA ACATGCTCAC CATCAAGCAG AAGATCTTAC TCACGGTTAC CGTCGCGGTA
TTGCTGTCGA CCGTGCTCGT GGGTGTCTTG AGTCAACGTA GCGCCAAGGA AGTCGTCGAG
CAGCGCATGC TCACCTCCGA GCTGCCCAAC ACCTTGCAGG CGATCCGCAA CAAGGTGGAG
ATGGACATCG CCACCCTGAT GAACGCCGCC GAGCAGCTCG CCAGCAGCAA GATGCTCAAG
CAGTGGCTGG TCGAGGGCCG CCCTGCCGAG ACAGAGCCTC TGGTGATCGC CCAGCTCAAG
GATGTGCAGC AGCAATATAA GCTGGTGCAA GCCTCCTATG CCGACAGGCA GACCGCCGCT
TACTACACCC AGGACGGCTT CTTGCGGATC CTTACCCCGG ATCAGGATGG TTGGTTCTTC
AACTATAAAA ACAGCGGCAC AGAGCGCATG CTCAACGTGT TCACCGAGGC CAATGGCGAG
GTGAAGCTCT TCATCAACTA CCAACAGCCC AACGACCGCG GCTTGGTGGG ACTGGCCAAG
TCGCTGGACG ACATGGTACG CCTGCTGAAA TCCTTCAAGA TCGAAGATAC AGGCTTCGTT
TACCTGGTGG ATGCCAAGGG TGACGTCAAG CTGCACTCGG ACACCAGCCA GATTGGCAAG
GCCAGTTTGA GTTCACTCTA TGGCGGTAAC GTGACCAGAG AGCTGCTCAA CAAGGGCGAC
TTTGGCCTGA CACAGACAGA GCTAGACGGT GAGACATTGC TGGTCGCCAG CAGCTATATT
CCCTCAATGG ACTGGTATCT GGTAGCCCAG GTGCCCAGGG CCGAGGTATT CGCCCTGCTG
GAAGAGTCGG CCTATCAGAT CCTCGTCTGG ACAGTGCTGA TCGCCGCCGC CTTTATCGGC
CTCTCTACCT TCGTCTCCGC CTCGGTGAGC CAGCCCATTG CCAAGGTAGC CGACATGCTG
CAAGACATAG GTCAGGGTGA AGGGGATCTG CGCCAACGCC TGCCGGTCGA AGGTAACGAC
GAACTAGCGC AGCTGGCCAA GGGCTTCAAC AGCTTTATCG AGAAGATCCA GCACTCCATC
ATAGAGGTGA CAGACACCAG CGTGCAGCTG AGTCACGCCG CCAAGGATGT GGCCAATCAG
GCCCAGCAGA CCCAGGACGA CAGCCAGCTG CAGAAAGATC AGACCATGAT GGTGGTCACC
GCTATCAACG AGATGGGCGC GACCGTGCAC GAGATCGCCG GCAACGCCGC CCAGGCCGCC
GACAACGCCA AGGACGCCGA CAACGCCTCC AGCAACGGCC AGATAGTGGT GACCCGCGCC
CGCGACACCA TCAATCAGCT GTCTCAGGAT GTGGAACAGG TGGGTAATGT GATCGAATCC
TTGGCCACCC ATACCACCTC CATCGGCAGT ATCCTGGATG TGATCCGCGC CGTATCGGAT
CAGACCAACC TGCTGGCCCT CAACGCCGCC ATTGAGGCCG CCCGTGCCGG AGAGGCAGGA
CGAGGCTTCG CCGTGGTCGC CGAGGAGGTA CGTAACCTGG CCTCACGCAC CGCCGCGTCG
ACCGACGAGG TGCAGAAGAT GATCGACAAC CTACAGAGCG AGGCGGCCCG CGCCGTCGAG
GCGATGACCC AGAGCAAGAG CCGCAGCCAG GAAGGGGTAC AGGCGGTCGA CGAGGCCAGC
CATACCCTGA CGGAGATCAG CCAGCAGATA GGCGCCATAA CTGACATGAA TATTCAGGTC
GCGGCGGCCA CCGAGGAGCA GTCTACCGTG GTGGAAGATA TCAACCGCAA CGTCACGGAG
ATCAGCGAGA TCACCCAGCG TACCAGCGAG ACCTCCCAGG CAGTGGCCCA GGCCAGCCAG
TCGCTCAACC AGCTGGCCCA CAGGCTAGAT ACCTTGGTCG CCGGCTTCAA GGTCTAG
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| Protein sequence | MKLNMLTIKQ KILLTVTVAV LLSTVLVGVL SQRSAKEVVE QRMLTSELPN TLQAIRNKVE
MDIATLMNAA EQLASSKMLK QWLVEGRPAE TEPLVIAQLK DVQQQYKLVQ ASYADRQTAA
YYTQDGFLRI LTPDQDGWFF NYKNSGTERM LNVFTEANGE VKLFINYQQP NDRGLVGLAK
SLDDMVRLLK SFKIEDTGFV YLVDAKGDVK LHSDTSQIGK ASLSSLYGGN VTRELLNKGD
FGLTQTELDG ETLLVASSYI PSMDWYLVAQ VPRAEVFALL EESAYQILVW TVLIAAAFIG
LSTFVSASVS QPIAKVADML QDIGQGEGDL RQRLPVEGND ELAQLAKGFN SFIEKIQHSI
IEVTDTSVQL SHAAKDVANQ AQQTQDDSQL QKDQTMMVVT AINEMGATVH EIAGNAAQAA
DNAKDADNAS SNGQIVVTRA RDTINQLSQD VEQVGNVIES LATHTTSIGS ILDVIRAVSD
QTNLLALNAA IEAARAGEAG RGFAVVAEEV RNLASRTAAS TDEVQKMIDN LQSEAARAVE
AMTQSKSRSQ EGVQAVDEAS HTLTEISQQI GAITDMNIQV AAATEEQSTV VEDINRNVTE
ISEITQRTSE TSQAVAQASQ SLNQLAHRLD TLVAGFKV
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