| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0080 |
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| Symbol | |
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| ID | 4278164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 93795 |
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| End bp | 95705 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638132821 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_748781 |
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| Protein GI | 114561268 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACAC TTACCATTAA ACAAAAAATA TTACTGACCG TGACGGTTGC TGTATTGCTA
TCGACGATCT TAGTCGGATT ATTAAGTCAA CGAAGTGCAA AGCAAGTTGT TGAGCAGCGG
ATGCTAAACT CGGAAATGCC GAGCTTACTC ATGCAAATTC GCAATGAAGT CGACCTCGAA
ATCCGTAGTT TAATCAATGC TTCGGAACAG TTAGCGAATA GCCGAATGTT GCTAGAATGG
CTTCAAAATG GTCGCCCTGC TGACCAAGAA AACCTCGTTA TCGCAGAACT TAATGACATG
AAAAATCAAT ACGATTTAGT TCAAGCGTCT TACGCCGACA AAGAAACTGC GGCCTACTAT
ACTCAGGATG GTTTTTTGCG AATATTAAAT CCAGAGCAAG ATGGCTGGTT TTTTGACTAC
CGCGATAGTA AAAAAGAGCG TTTGTTGACG GTTTATACCG AAGCCAATGG TGAAGTAAAA
CTTTTTATTA GTTACCAACA GCCCAATGGT CGTGGCATGG TTAGTCTAGC CAAATCGTTA
GATGATATGG TTAATTTATT GGCTTCATTT AAAATTGAAG ACAGCGGGTT TGTATATTTA
GTTGATACTA AAGGTGAAGT CAAACTGCAT CAAGATACGA ACAAAATAGG TAAAAGCAAA
CTCAGCAACT TGTACCCTAA TGCCAACACT AACCAATTGT TAAATAAAAG TAACTTTAAT
TTAGTCAAAG CCGATGTTAA TGGCCAACAC ATGTTGATTG CCAGTAGCTA CATTGAGTCG
ATGGATTGGT ACTTGGTTGC TCAAGTACCT GAAGCAGAAG TATTTGCCCT GCTACAAAAA
TCGGCTTATC AGATCTTACT ATGGACAATA CTCATCGCGG CGGTATTTAT TGCCATTTCG
ATTACTGTTG CTGGTTCGGT TAGTCGTCCT ATTGCACATA TTGCCGAATT ATTTCGTAAC
ATTGGTGAAG GTGAAGGTGA TTTGCGCCAA AGACTACCGG TTAATGGTGA TGACGAAATT
GCCCAGCTCG CTCGTGGCTT TAATAGCTTC ATCAGCAAAA TCCAAGATAC AGTAGCCGAA
GTTGCTAAAA CCAGTGAGCA GCTTGGTTTA TCGGCACTTG ATGTATCAAA CCAATCCAAT
CAAACATTAG CTGATAGCCA GTTACAAAAA GACCGTACCA TCATGGTTGT TACTGCTATT
AACGAAATGG GCGCCACGGT TAACGAAATT GCTAGCAATG CAGCTCAAGC AGCTGTCACC
GCTCGTGATG CCGATACTGA ATCAGTGGAT GGTCAAAAAG TCGTAACCCG TGCACGTTCG
ACTATCAATC AGTTGTCTAA AGACGTCGAG CAAGTCGGTG AAGTGATTGA GTCACTAGCG
ACGCACACTA AATCGATTGG CAGTATTTTA GATGTTATCC GTGCCATTTC AGAGCAAACA
AACTTACTGG CACTTAACGC CGCGATTGAA GCTGCTCGTG CTGGAGAAGC GGGACGTGGC
TTTGCTGTAG TTGCAGATGA AGTGCGTAAC TTAGCCTCTC GAACTGCGGC GTCGACCAAC
GAAGTGCAAA CTATGATTGA TAAACTTCAA TCAGAAACCA GTCGTGCTGT TAACGCTATG
GAGCAATCTC GTAGCCGCTC ACACGAAGGT GTTACAGCTG TCGATGAAGC AAGCCAGTCG
CTAAGTGGTA TTAGCGAACG TATTGCACTG ATTAGCGATA TGAACATTCA AGTGGCTGCT
GCGACAGAAG AGCAATCTAC TGTGGTTGAA GACATTAATC GTAATGTGAC CGAAATCAAC
GATATTACTC AGCGAACAGC AGATACTGCT CACGCAGCTG CAAATGCGAG TAAATCATTG
AATCAGTTAG CCAGTAGACT TGATATCTTA GTGGCTCGCT TTAAAGTGTA G
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| Protein sequence | MNTLTIKQKI LLTVTVAVLL STILVGLLSQ RSAKQVVEQR MLNSEMPSLL MQIRNEVDLE
IRSLINASEQ LANSRMLLEW LQNGRPADQE NLVIAELNDM KNQYDLVQAS YADKETAAYY
TQDGFLRILN PEQDGWFFDY RDSKKERLLT VYTEANGEVK LFISYQQPNG RGMVSLAKSL
DDMVNLLASF KIEDSGFVYL VDTKGEVKLH QDTNKIGKSK LSNLYPNANT NQLLNKSNFN
LVKADVNGQH MLIASSYIES MDWYLVAQVP EAEVFALLQK SAYQILLWTI LIAAVFIAIS
ITVAGSVSRP IAHIAELFRN IGEGEGDLRQ RLPVNGDDEI AQLARGFNSF ISKIQDTVAE
VAKTSEQLGL SALDVSNQSN QTLADSQLQK DRTIMVVTAI NEMGATVNEI ASNAAQAAVT
ARDADTESVD GQKVVTRARS TINQLSKDVE QVGEVIESLA THTKSIGSIL DVIRAISEQT
NLLALNAAIE AARAGEAGRG FAVVADEVRN LASRTAASTN EVQTMIDKLQ SETSRAVNAM
EQSRSRSHEG VTAVDEASQS LSGISERIAL ISDMNIQVAA ATEEQSTVVE DINRNVTEIN
DITQRTADTA HAAANASKSL NQLASRLDIL VARFKV
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