Gene PA14_55960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_55960 
SymbolpctC 
ID4382586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4994810 
End bp4996708 
Gene Length1899 bp 
Protein Length632 aa 
Translation table11 
GC content65% 
IMG OID639327099 
Productchemotactic transducer PctC 
Protein accessionYP_792652 
Protein GI116052341 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.289325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGCT CGCTGTCGTT TGCCAAGAAA ATCCTTCTCG CCGCCGCATT GGTGGTGGTT 
TTCGCCTTCA CCTGCTTCAT CCTCTACAAC GATTACCGAC AGCGCGAGGC CGTGCGCACG
GACACGGAAA ACTACCTCGG GGAAATCGGC ACCCTGACCG CCAGCAACAT CCAGAGCTGG
CTGGAAGGCC GCATGCATCT GGTGGAAGGC CTGGCCTCGC AACTGGCGCT GCTCGACCAG
CCCGACGAGG CGAATATCGC AAGGCAACTG GAACAGCCCG TCTTCAGCCG CAATTTCGCG
TCGGTCTATC TTGGCGAGGC GGCCAGCGGC GCCTTCACCA TGCGCCCCTA CGACGCCATG
CCGGAAGGTT ACGACCCACG TACCCGCGCC TGGTACAAGG ACGCGCTGGC GGCCGACCGG
CTGATCGTCA CCGAACCCTT CGTCGATGCC GGCACCGGCG AGCAGATCCT CGCCATGTCG
CTGCCGGTGC GGCACGCCGG TCAACTGCTG GGCGTCGCCG CCGGCGACAT GAAGCTGGAG
ACCCTGACCG CGATCCTCAA TTCCCTGAAG TTCGATGGTG CCGGCTACGC CTTCCTGGTC
AGCGACGCCG GCAAGATCCT CCTCCACCCC GACTCCGGGC TGGTCCTGAA GACCCTCGCC
GAAGCCTATC CCAAGGGCGC ACCGAACATC GACCCCGGGG TCCACGAGGT GGAACTCGAC
GGCCGCAGCC AGTTCGTTTC CTTCACCCCG GTGAAGGGAC TGCCCGGCGT GACCTGGTAC
GTCGCCCTGG TCCTCGACCG CGACACCGCC TATTCGATGC TCAGCGAATT CCGCACTTCG
GCGATCGTCG CCACGCTGAT CGCGGTGGTC GGCATCATGC TTCTCCTCGG CATGCTGATC
CGCGTACTGA TGCAGCCGCT CACCGACATG GGCCGCGCCA TGCAGGACAT CGCCCAGGGC
GAAGGCGACC TGACCAAGCG CCTGCGGGTC ACCAGCAACG ATGAATTCGG TACGTTGGCC
AATGCCTTCA ACCGCTTCGT CGAGCGTATC CACGAATCGA TCCGCGAGGT CGCCGGCACC
GCTCGCCAAC TGCACGACGT GGCGCAACTG GTGGTGAACG CCTCGAACTC TTCGATGGCC
AACTCCGACG AGCAGTCCAA CCGTACCAAC AGCGTCGCCG CGGCGATCAA CGAACTCGGT
GCCGCCGCCC AGGAAATCGC CCGCAACGCC GCCGATGCCT CGCACCATGC GTCCGACGCC
AACCACCAGG CCGAGGACGG CAAGCAGGTG GTCGAGCAGA CCATCCGCGC GATGAACGAG
CTTTCCGAGA AGATCAGCGC CTCCTGCGCC AACATCGAGG CCCTGAACAG CCGCACGGTG
AACATCGGCC AGATCCTCGA GGTGATCAAG GGCATCTCCG AGCAGACCAA CCTGCTTGCC
CTCAACGCCG CCATCGAAGC CGCCCGCGCC GGCGAGGCCG GACGCGGCTT CGCGGTGGTC
GCCGACGAGG TGCGCAACCT GGCCCATCGC GCCCAGGAGT CGGCCCAGCA GATCCAGAAG
ATGATCGAAG AGCTGCAAGT CGGCGCCCGC GAGGCGGTGG CCACCATGAC CGAAAGCCAG
CGCTACAGCC TGGAGAGCGT GGAGATCGCC AACCGTGCCG GCGAACGCCT GGGCAGCGTG
ACCAGCCGGA TCGGCGAGAT CGACAGCATG AACCAGTCGG TGGCCACCGC CACCGAGGAA
CAGACCGCGG TGGTCGACTC GCTGAACATG GACATCACCG AGATCAACAC CCTCAACCAG
GAAGGCGTGG AGAACCTCCA GGCCACCCTG CGCGCCTGCG GCGAGCTGGA AGCCCAGGCC
GGGCGCCTGC GGCACCTGGT GGACAGCTTC AAGATCTGA
 
Protein sequence
MLRSLSFAKK ILLAAALVVV FAFTCFILYN DYRQREAVRT DTENYLGEIG TLTASNIQSW 
LEGRMHLVEG LASQLALLDQ PDEANIARQL EQPVFSRNFA SVYLGEAASG AFTMRPYDAM
PEGYDPRTRA WYKDALAADR LIVTEPFVDA GTGEQILAMS LPVRHAGQLL GVAAGDMKLE
TLTAILNSLK FDGAGYAFLV SDAGKILLHP DSGLVLKTLA EAYPKGAPNI DPGVHEVELD
GRSQFVSFTP VKGLPGVTWY VALVLDRDTA YSMLSEFRTS AIVATLIAVV GIMLLLGMLI
RVLMQPLTDM GRAMQDIAQG EGDLTKRLRV TSNDEFGTLA NAFNRFVERI HESIREVAGT
ARQLHDVAQL VVNASNSSMA NSDEQSNRTN SVAAAINELG AAAQEIARNA ADASHHASDA
NHQAEDGKQV VEQTIRAMNE LSEKISASCA NIEALNSRTV NIGQILEVIK GISEQTNLLA
LNAAIEAARA GEAGRGFAVV ADEVRNLAHR AQESAQQIQK MIEELQVGAR EAVATMTESQ
RYSLESVEIA NRAGERLGSV TSRIGEIDSM NQSVATATEE QTAVVDSLNM DITEINTLNQ
EGVENLQATL RACGELEAQA GRLRHLVDSF KI