Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2088 |
Symbol | |
ID | 7383023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 2243313 |
End bp | 2245166 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643655407 |
Product | methyl-accepting chemotaxis sensory transducer with Cache sensor |
Protein accession | YP_002553543 |
Protein GI | 222111279 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.258516 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCTGT GGAAATCTCT CAAGGGCCAG ATTCTGCTGG TGTCGCTGGC ATGCCTGGTG GTGGCGTTGG TCGCGCTCTC GGCGGCGAAT CTGTGGACTG CCCGCTCGCA CGCCCATGCG TCGCTGGCGT CCGAAACGCA ACTGCTCGCG CACAGCCATG TGGAAACGCT GCGCACCTGG GCCAACGCCA AGGCGGCCGT CGTGGAGGCT GCAGGCGCGT CGCTGGATGA CGAGCAGCCT CCCAAGGCGC TGCTGATGCT GTCCAAGGCG GGGGACTTCC TGGTCAGCTA TTTTGGCTAC GCCGACAAAC GGACGGCGTT TTCGTCGCCC CAGAACCTGC CGCCCGATTA CGACCCGACC ACGCGGCCCT GGTACCAGCA AGCCGCCCAG GCCAGCGGGA GCGTTCTCAC CGCCCCGTAT GCGGACGCGG GCGGCAACGG CCTGGTGGTG ACTTTCGCGC GCGCCGCCCG CGAAGGGGGC CGCGTCAAGG CCGTGATGGC CGGCGACGTT TCGCTGGCTG CGGTGATTGC CAACGTCACC TCCATCAAGC CCACGCCGTC CAGCTACGCC TTTCTCGTCG GAGGCGACGG CGCCATCATC GCCCACCCCG ACGCCAAGCT GGCGCTGAAG CCGGCGACCG ACATCGCCCC CGCGCTGTCG GCGCAGGGCC TGGCCGGCAT TGCGCAAAGC GGTGCGCTGC AGGCCATGGA ACTGCAGGGC CGGCCCATGC TGCTGCATGT CTCCAAGGTT CCGGACACCC CTTGGATGCT GGTGATTGCC CAGGACCGTG ACGAGGCGCT GGCCGCCATC TCCAGCATGC TGCGCGTTTC GCTGGTGGCC GGCATTGTGG TACTGGTGAT CGCCACCCTG CTGCTGGCTG GTGTGCTGGC GCGGCGCCTG CGCCAACTCA CCCAGGTGCG CGACGCCATG CACCAGATTG GCGAGGGCGA CGGCGACCTG TCGCGCCGCA TCGACGCGCA GGGCGAGAAC GAACTCGCGC AGATCGCGGG CAGTTTCAAC AACTTTGCCA CCAAGCTCTC GGGTGTGCTG GCGCAGATCC GGGATGCGAG CCAGTCGGTG CGTCTGGCGT CGGAAGAGAT CGCCACGGGC AACCAGGACC TGTCCAGCCG CACCGAGCTG ACGGCCTCCA GCCTGCAGCA GACAGCCGCC TCGATGCAGC AGCTCACCGA GACGGTGCGC CACAACGCCG ACGCGGCCCG CCAGGCCAAC CAACTGGTGG CGCAGGCGGC GGGGGTGGCC CAGCACGGCG GCACCGTGGT GGGCAACGTG GTCAGCACCA TGGAGCAGAT CAATGCGGCG TCGCGCAAGA TCAACGACAT CATTGGCGTG ATCGATGGCA TTGCCTTCCA GACCAACATC CTCGCGCTGA ATGCGGCCGT CGAGGCCGCG CGCGCGGGCG AGCAGGGCCG GGGCTTCGCC GTGGTGGCGG GCGAGGTGCG CAACCTGGCG CAGCGCAGCG CCGAGGCCGC GCGCGAGATC AAGGCGCTGA TCGGCTCGTC GGTGGCACAG GTGGAACAGG GCTCGCGGCT GGTCAACGAT GCGGGCACCA CCATGGCAGA CATCGTGCAG TCGGTGCAGC GCGTCACGGA CATCATGGCC GAGATCACCG CCTCCACGAA CGAGCAAAGC ACCAGCATTG GCGAGGTGGG CCAGGCCGTG GCGCAGTTGG ATCAGATGAC CCAGCAGAAC GCCGCACTGG TGGAAGAAAG CGCCGCAGCG GCGGCCAGCC TCAAAGACCA GTCTGTGCGC CTGTCCGACG TGGTGGGCAC CTTCCGGCTG CACGACGAGG CCGCAAGCGC CGGTCGGGCG GCGCCGCTGG CACTGCAGCG CTAG
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Protein sequence | MSLWKSLKGQ ILLVSLACLV VALVALSAAN LWTARSHAHA SLASETQLLA HSHVETLRTW ANAKAAVVEA AGASLDDEQP PKALLMLSKA GDFLVSYFGY ADKRTAFSSP QNLPPDYDPT TRPWYQQAAQ ASGSVLTAPY ADAGGNGLVV TFARAAREGG RVKAVMAGDV SLAAVIANVT SIKPTPSSYA FLVGGDGAII AHPDAKLALK PATDIAPALS AQGLAGIAQS GALQAMELQG RPMLLHVSKV PDTPWMLVIA QDRDEALAAI SSMLRVSLVA GIVVLVIATL LLAGVLARRL RQLTQVRDAM HQIGEGDGDL SRRIDAQGEN ELAQIAGSFN NFATKLSGVL AQIRDASQSV RLASEEIATG NQDLSSRTEL TASSLQQTAA SMQQLTETVR HNADAARQAN QLVAQAAGVA QHGGTVVGNV VSTMEQINAA SRKINDIIGV IDGIAFQTNI LALNAAVEAA RAGEQGRGFA VVAGEVRNLA QRSAEAAREI KALIGSSVAQ VEQGSRLVND AGTTMADIVQ SVQRVTDIMA EITASTNEQS TSIGEVGQAV AQLDQMTQQN AALVEESAAA AASLKDQSVR LSDVVGTFRL HDEAASAGRA APLALQR
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