Gene Shewmr7_0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0930 
Symbol 
ID4255352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1064318 
End bp1066210 
Gene Length1893 bp 
Protein Length630 aa 
Translation table11 
GC content50% 
IMG OID638121541 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_736986 
Protein GI114046436 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.257402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCAA CACTCAAAAC CCGCCTACTC TTTAGTAGTC TCTTCGCCGT TCTCATTACT 
GTCGCAGTGC TGGTAAGCAT TTCAAGCTAT TTCATCCGCA ATAATGCCTT AGAAAATACT
CAACATGAAA TTGATCAACT GGCGAATACC TTTGCCGAAG GTATTGGCCT GTGGATGCAA
GATCGCAAAA TGGCGATCAC CAGTCTTAAG AAGACCATAG AAGCCGATCC CAATGTGCAG
ATCACGCCCT ATTTATTACA AGCCCACAAT GGCATGGGAT TCGCGCTGAC CTATTTTGGC
GATGAACAAG GCAACATGTA CCGCCAAGAT CCCGCGCTAA ACACGGCTAA CTATGATCCC
AGAGTCCGTC CTTGGTATAT GGATGCCAAA GCCGCCAACG CCATGGTAAT GACTGCGCCC
TATGTGAGCG CCACCTTAAA AAAACAAGTG GTGACCATTG CCGAGCCCGT CATGGTATCG
GGTAGTTTGT TCGGGGTTGC CGCAGCAAAC CTCACCATAG ATCAACTCAC CGATGCGGTG
CAGCGCCTTA AAGTGCCAGG TAAAGGCTAT ACCCTCATGG TGGACAAGAC TGGGCTTATC
ATTAGTCACC CCAATAACCA GCTTAATAAT CAACAACTAA ATAAAATTGA TAGCAATCTT
ACCCCCAGCT GGTTATCCCA ACGGGCAAAC GCCAATACCT TAGAAGAGCG TGAACTCGAT
GGCGAAACTC AACTCATCTA TGTTGCAGCT GTGCCATCTA CCGACTGGGA ACTGATTTTC
GTGATGAATA AAGAGGAGAT CATGTCGCAG GCCACCACTC TTGCCTGGTG GATGTCCGCT
GTTGGAGCTG GCTTACTGGT CATCTTCGGC TTGGTCCTAG TGGCCATCTT TAAAATTCAA
TTTAAAGACT TAGAACGCGT TGCCTTGGCA CTTAATGATA TTGCCGAAGG GGATGGCGAC
CTGACGGTTA GGATCCACAC CGCCAACAGC CACGACGAAA TTGGTATCTT GGCCTCAGGC
TTTAACCGCT TCGTCGAACG ACTGCATGGC ATGATCTCCA GAATGCACCA GATCGCAGGC
CAGCTTGAAT ATCAGGCCAA GGGCAGCAGT GCATCGGCCA CGGATAATAG CCAGCGTATC
GCCGTACAGC AGGATGAAGT GACTATGGTC GCGACCGCTG TGACTGAAAT GGCCAGCGCC
ACCGAAGAGA TTGCCAGCAA CGCCGAGCAC ACAGCACAAA CGGCGCAAGA TGCAGTTGGA
CTATCTGACC ATGGTCAAAA ACAAGTGATG CAGAGTCAGC AATCTATTCG TAACTTGGCG
AACGAAGTCG ATACTGCTGG CCGTATTATC AGTGAGCTTA ATGAACACTC ACAAAAGATT
AATAGCATCC TGCTCACCAT CAGTGGTATT GCCGAACAAA CCAACTTGTT GGCGTTGAAC
GCTGCGATTG AAGCCGCCCG CGCCGGTGAA CAAGGTCGCG GCTTTGCCGT GGTGGCCGAC
GAAGTGCGCG TGTTGTCGCA GCGTACTCAC TCCTCGACTC AAGAAATTCA AGCTATGATC
GAGACCCTAC AACAAACTGC AGCTAAGGCG GTTAAATCTA TGACCCAAAG TCACGATATG
GCTGAAACCA GTGTCGCCGA CGCCAACTCG GCCAGTGAGA GCCTGCTACA GATCAGCAAA
GCCATTAATG AGATCTCGGA TATGGCGAGC CAGATTGCCA CCGCCGCAGA GGAGCAAACC
TCGGTCACCA GCGAAATTAA CCGTAATACC GAGTCGATTC GTGAAGTTTC TGAAAACCTC
TCCATAGAAG CACAAAGCTC GATGGTACAG GCGCAGGAAT TGGCTCATTT AGCCGCCTCG
CTGCAGCAGG AAGTCGGCCG CTTTAAGCTA TAA
 
Protein sequence
MRSTLKTRLL FSSLFAVLIT VAVLVSISSY FIRNNALENT QHEIDQLANT FAEGIGLWMQ 
DRKMAITSLK KTIEADPNVQ ITPYLLQAHN GMGFALTYFG DEQGNMYRQD PALNTANYDP
RVRPWYMDAK AANAMVMTAP YVSATLKKQV VTIAEPVMVS GSLFGVAAAN LTIDQLTDAV
QRLKVPGKGY TLMVDKTGLI ISHPNNQLNN QQLNKIDSNL TPSWLSQRAN ANTLEERELD
GETQLIYVAA VPSTDWELIF VMNKEEIMSQ ATTLAWWMSA VGAGLLVIFG LVLVAIFKIQ
FKDLERVALA LNDIAEGDGD LTVRIHTANS HDEIGILASG FNRFVERLHG MISRMHQIAG
QLEYQAKGSS ASATDNSQRI AVQQDEVTMV ATAVTEMASA TEEIASNAEH TAQTAQDAVG
LSDHGQKQVM QSQQSIRNLA NEVDTAGRII SELNEHSQKI NSILLTISGI AEQTNLLALN
AAIEAARAGE QGRGFAVVAD EVRVLSQRTH SSTQEIQAMI ETLQQTAAKA VKSMTQSHDM
AETSVADANS ASESLLQISK AINEISDMAS QIATAAEEQT SVTSEINRNT ESIREVSENL
SIEAQSSMVQ AQELAHLAAS LQQEVGRFKL