Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0930 |
Symbol | |
ID | 4255352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1064318 |
End bp | 1066210 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638121541 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_736986 |
Protein GI | 114046436 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.257402 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATCAA CACTCAAAAC CCGCCTACTC TTTAGTAGTC TCTTCGCCGT TCTCATTACT GTCGCAGTGC TGGTAAGCAT TTCAAGCTAT TTCATCCGCA ATAATGCCTT AGAAAATACT CAACATGAAA TTGATCAACT GGCGAATACC TTTGCCGAAG GTATTGGCCT GTGGATGCAA GATCGCAAAA TGGCGATCAC CAGTCTTAAG AAGACCATAG AAGCCGATCC CAATGTGCAG ATCACGCCCT ATTTATTACA AGCCCACAAT GGCATGGGAT TCGCGCTGAC CTATTTTGGC GATGAACAAG GCAACATGTA CCGCCAAGAT CCCGCGCTAA ACACGGCTAA CTATGATCCC AGAGTCCGTC CTTGGTATAT GGATGCCAAA GCCGCCAACG CCATGGTAAT GACTGCGCCC TATGTGAGCG CCACCTTAAA AAAACAAGTG GTGACCATTG CCGAGCCCGT CATGGTATCG GGTAGTTTGT TCGGGGTTGC CGCAGCAAAC CTCACCATAG ATCAACTCAC CGATGCGGTG CAGCGCCTTA AAGTGCCAGG TAAAGGCTAT ACCCTCATGG TGGACAAGAC TGGGCTTATC ATTAGTCACC CCAATAACCA GCTTAATAAT CAACAACTAA ATAAAATTGA TAGCAATCTT ACCCCCAGCT GGTTATCCCA ACGGGCAAAC GCCAATACCT TAGAAGAGCG TGAACTCGAT GGCGAAACTC AACTCATCTA TGTTGCAGCT GTGCCATCTA CCGACTGGGA ACTGATTTTC GTGATGAATA AAGAGGAGAT CATGTCGCAG GCCACCACTC TTGCCTGGTG GATGTCCGCT GTTGGAGCTG GCTTACTGGT CATCTTCGGC TTGGTCCTAG TGGCCATCTT TAAAATTCAA TTTAAAGACT TAGAACGCGT TGCCTTGGCA CTTAATGATA TTGCCGAAGG GGATGGCGAC CTGACGGTTA GGATCCACAC CGCCAACAGC CACGACGAAA TTGGTATCTT GGCCTCAGGC TTTAACCGCT TCGTCGAACG ACTGCATGGC ATGATCTCCA GAATGCACCA GATCGCAGGC CAGCTTGAAT ATCAGGCCAA GGGCAGCAGT GCATCGGCCA CGGATAATAG CCAGCGTATC GCCGTACAGC AGGATGAAGT GACTATGGTC GCGACCGCTG TGACTGAAAT GGCCAGCGCC ACCGAAGAGA TTGCCAGCAA CGCCGAGCAC ACAGCACAAA CGGCGCAAGA TGCAGTTGGA CTATCTGACC ATGGTCAAAA ACAAGTGATG CAGAGTCAGC AATCTATTCG TAACTTGGCG AACGAAGTCG ATACTGCTGG CCGTATTATC AGTGAGCTTA ATGAACACTC ACAAAAGATT AATAGCATCC TGCTCACCAT CAGTGGTATT GCCGAACAAA CCAACTTGTT GGCGTTGAAC GCTGCGATTG AAGCCGCCCG CGCCGGTGAA CAAGGTCGCG GCTTTGCCGT GGTGGCCGAC GAAGTGCGCG TGTTGTCGCA GCGTACTCAC TCCTCGACTC AAGAAATTCA AGCTATGATC GAGACCCTAC AACAAACTGC AGCTAAGGCG GTTAAATCTA TGACCCAAAG TCACGATATG GCTGAAACCA GTGTCGCCGA CGCCAACTCG GCCAGTGAGA GCCTGCTACA GATCAGCAAA GCCATTAATG AGATCTCGGA TATGGCGAGC CAGATTGCCA CCGCCGCAGA GGAGCAAACC TCGGTCACCA GCGAAATTAA CCGTAATACC GAGTCGATTC GTGAAGTTTC TGAAAACCTC TCCATAGAAG CACAAAGCTC GATGGTACAG GCGCAGGAAT TGGCTCATTT AGCCGCCTCG CTGCAGCAGG AAGTCGGCCG CTTTAAGCTA TAA
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Protein sequence | MRSTLKTRLL FSSLFAVLIT VAVLVSISSY FIRNNALENT QHEIDQLANT FAEGIGLWMQ DRKMAITSLK KTIEADPNVQ ITPYLLQAHN GMGFALTYFG DEQGNMYRQD PALNTANYDP RVRPWYMDAK AANAMVMTAP YVSATLKKQV VTIAEPVMVS GSLFGVAAAN LTIDQLTDAV QRLKVPGKGY TLMVDKTGLI ISHPNNQLNN QQLNKIDSNL TPSWLSQRAN ANTLEERELD GETQLIYVAA VPSTDWELIF VMNKEEIMSQ ATTLAWWMSA VGAGLLVIFG LVLVAIFKIQ FKDLERVALA LNDIAEGDGD LTVRIHTANS HDEIGILASG FNRFVERLHG MISRMHQIAG QLEYQAKGSS ASATDNSQRI AVQQDEVTMV ATAVTEMASA TEEIASNAEH TAQTAQDAVG LSDHGQKQVM QSQQSIRNLA NEVDTAGRII SELNEHSQKI NSILLTISGI AEQTNLLALN AAIEAARAGE QGRGFAVVAD EVRVLSQRTH SSTQEIQAMI ETLQQTAAKA VKSMTQSHDM AETSVADANS ASESLLQISK AINEISDMAS QIATAAEEQT SVTSEINRNT ESIREVSENL SIEAQSSMVQ AQELAHLAAS LQQEVGRFKL
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