| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3379 |
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| Symbol | |
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| ID | 1185038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3820066 |
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| End bp | 3821745 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394730 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | NP_793162 |
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| Protein GI | 28870543 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCTGA GTCTGAAAGC CAAGGTTTTG TCACTGGCAG TCCTGCCGGT TCTGGTGTTT
GCGCTGGTGA TCAGCGCCAC GACGGTATTC ATGTTGCACA AGCAGGCCGA GCGTGAGGTC
AGCGATACAC GAGAGCGGCT GCTGTCCGAG GCCAAGGCAA CTCTGCAGAA CTACGTCGCA
ATTGCCATGA CCGCTATCAA GCCACTCTAC GATGCAGCAG CGCCCGGCGA TGAAGCGGCG
CGTGCCAACG CCATCAAGCT GCTCTCTGCT GTCAGTTACG GCAAGGACGG TTACCTCTTC
GGCTACGACT CACAGGTCGT GCGCATCTTT CGAAGCACCA GTCCTGATGG CCTGGGTAAA
AGCTTCGTCG ATGCTCGGGA TGCGAACGGG GTTTATATCA ACCGTGAGTT GGTCGCAGTC
GGTAAGGCCG GCACTCACTA CGTGATGTAT TCCTCGGCTT TGCCGGGCAA GACCGAACCT
GTGCCCAAGA TCGGTTACAC CGATTACCTG CCTAAATGGG ACCTGGTTAT CGGTTCTGCC
GTCAATCTCG ACGGCATTGA TGCTCAGGTT GCCGCAGTCA GGCAGAACGT TGAAGCACGC
CTGCAAGAGA TGCTCTACAG CATTCTGGGG ATCACCGCGC TGGTGCTGGT CGTCATTGGC
ATCATAGGGA TGTTGCTGAC CGGTACTTTG CTACGGCCGC TCGGTTTGAT GAAAAACAAT
CTGGATGACA TCGCCGCAGG TGAGGGTGAC CTCACCCGAC GTCTGGCCAT TAGCAGTAAC
GACGAGTTGG GCGATCTGGC CGGTTCGTTC AACCGCTTCG TCGACAAGAT TCATGGCATG
GTGCGCCAGA TAACCGAGAT GACCGGGCAA CTAAACGGTC TGGTGGGTGA GGTCTCGGCG
CAGGCGCAAC GCTCGGAAAC CGCCATGGAC CGCCAGCGCC ACGAAACCGA TCAGGTGGCG
ACCGCGATCA ACGAGATGTC GGCTGCTGCC CAGGAAGTTG CCAAGAGCGC TCAAGGCGCT
TCGGTAGCCG CTCAACAGAC CGATGAGCAG GGACGTGCCG CCAAGCGCGT GGTCGATGGC
AGCATCAAGC AGATCCATGC GCTGGTGGAC GATATTCGCA AAAGCGGCTC GTCACTTGAT
GTGCTGCAAA AGGACGTTTC TTCTATCGTC AGCGTACTGG GCGTCATTCG CTCGATTGCC
GAACAGACCA ATCTGCTTGC ACTCAACGCG GCCATTGAGG CCGCCAGGGC GGGCGAAGCC
GGTCGCGGGT TTGCCGTGGT TGCCGATGAG GTGAGGGCGC TGGCCAGCCG GACCCAGCAG
AGCACCCAGG AAATCCAGGG CATGATCGAT CGCTTGCAAC AGGGCACTCA GGAAGCGGTC
AGCGCAATGC GCCGTTCCAG CGAAGCGGGT GACGGCACCT CCGCGCAAGC CAACGAGGCG
GGCACTTCGC TGGGGACCAT TGGCGAGTTG ATCGCGACGA TCAATGCCAT GAACGCCCAG
ATTGCCAGCG CAGCCGAAGA GCAGACTGCG GTAGCCGAAG AAATCAATCG CAGCGTTCAT
CAGATCGCCG GCGCAGTCGA AAGTGTGGCC GATGAAACCC GGCAGAGCGC GCAGACCTCG
CGCAGTCTTG CCGAACTGGG CTCGCGCCTT GACCGGCTGG TCGGACAGTT CCGCGTTTGA
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| Protein sequence | MRLSLKAKVL SLAVLPVLVF ALVISATTVF MLHKQAEREV SDTRERLLSE AKATLQNYVA
IAMTAIKPLY DAAAPGDEAA RANAIKLLSA VSYGKDGYLF GYDSQVVRIF RSTSPDGLGK
SFVDARDANG VYINRELVAV GKAGTHYVMY SSALPGKTEP VPKIGYTDYL PKWDLVIGSA
VNLDGIDAQV AAVRQNVEAR LQEMLYSILG ITALVLVVIG IIGMLLTGTL LRPLGLMKNN
LDDIAAGEGD LTRRLAISSN DELGDLAGSF NRFVDKIHGM VRQITEMTGQ LNGLVGEVSA
QAQRSETAMD RQRHETDQVA TAINEMSAAA QEVAKSAQGA SVAAQQTDEQ GRAAKRVVDG
SIKQIHALVD DIRKSGSSLD VLQKDVSSIV SVLGVIRSIA EQTNLLALNA AIEAARAGEA
GRGFAVVADE VRALASRTQQ STQEIQGMID RLQQGTQEAV SAMRRSSEAG DGTSAQANEA
GTSLGTIGEL IATINAMNAQ IASAAEEQTA VAEEINRSVH QIAGAVESVA DETRQSAQTS
RSLAELGSRL DRLVGQFRV
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