| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_2246 |
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| Symbol | |
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| ID | 3367761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 2611442 |
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| End bp | 2613331 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637652596 |
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| Product | histidine kinase, HAMP region:Cache: chemotaxis sensory transducer |
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| Protein accession | YP_235327 |
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| Protein GI | 66045486 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.265681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.412954 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGTC TGGGTTTCAG CAAAAAGATC CTTCTCGCCG CCGCATTGAT TGTGGTCGTG
GCGTTCAGTG TGTTCATTGT CGTCAATGAC TATCGACAAC GTCAGTCGCT CAAATCCAGC
GTCAAGTCCG AGTTGCAACA ACTGGGTACG CTCACCACAC AAAACATTCA GACCTGGCTG
GAAAGCCGCA TGCAATTGCT GCAGTCGATG TCGCAGCAAA TCGCCGCGGA TGGCAAGGAA
CTGCCCCAGT TGCAGCGTGC CATCGGCCTG CCTGCCTACA GCGAAAGCTT TCAACTGAGC
TACTTTGGCA GCACCGAAGG CGTGATGTTC TCGGTGCCGT CGGCCAATCG CCCGGCTGAC
TACGATCCGC GTGCGCGTGG CTGGTACAAG GCGGCACAGA ATGCGCCGGG CACCATTGTG
ACCGAACCCT ACATCGCGGC ATCCTCTGGC AAGCTGGTCA TGACCATGGC CACACCGGTC
AAGTTTCAGA ATCAGTTCGT GGGCGTGGCC GGTGCTGATA TCGCTCTGGA CAACGTCACC
AAGATCATCA ACTCGCTGAA CTTCGATGGC CATGGCTATG CATTCCTGGT CAGTGCCGAC
GGCAAGATTC TGGTGCATCC GGACAGCAAA CTGGTGCTCA AGAACATCAG TGAAGCCTAC
CCGACCAATA CTCCGAAAAT TACTACCGGC GTGACTGAAA TCGACTCCGG TAAAAATCCG
GAGATCATTT CCTTCACGCC TGTTCAAGGT GTTTCGACGG CCAACTGGTA CGTGGCACTG
GTCCTCGAGC AGGATTCCGC CTACGCCATG TTGGCCGAGT TCCGTGCCTC GGCCATCACC
GCCATGGTGG TAGTGGTGGT GGTGATCATC CTGCTGCTGG GCCTGTTGAT TCGCGTGCTG
ATGCAACCCT TGCATCAGAT GGGTCGGGCG ATGCGTGACA TCGCTGACGG CGAGGGCGAT
CTGACCAAGC GTCTGGCAAT CACCTCGCAG GATGAGTTCG GCGAACTGGC CGAGTCGTTC
AACCGTTTCG TCGAGCGTAT TCACACCTCG ATCCGTGAAG TGGCCTCGAC TGCCGCGCAA
TTGGGCGAGG TTGCCACCCG GGTGGTCAAG GTCTCCAACG CCTCGATGGG TAACTCCGAC
CAGCAGGCCA ACCGTACCGA AAGCGTGGCG GCGGCGATCA ACGAACTGGG CGCAGCAGCC
CAGGAAATCG CCCAGAATGC GGCACGCACC TCGCAGCAGT CGAGTGATGC GAGCGGCCTG
GCCAGCGACG GCCAGAACGT CGTGCAGCAG ACCATCAAGG CGATGAACGA GCTGTCCGGG
AAGATCAGCG AGTCGTGCGT GAACATCGAA AGCCTGAATG GCAAGACTGC CAACATCGGG
CAGATTCTCG AGGTGATCAC CAGCATTTCC CAGCAGACCA ACCTGCTGGC GCTCAACGCA
GCCATCGAGG CAGCGCGTGC CGGTGAAGCA GGGCGCGGGT TCGCGGTAGT GGCCGACGAA
GTACGCAACC TGGCGCATCG CACTCAGGAT TCTGCCCAGC AAGTGCAGAC CATGATCGAA
GAGCTGCAGG TCGGCGCTCG CGACGCAGTG ACCAACATGA CCGAGAGCCA GCGTCAGAGC
GAGGACAGCG TCGGCATCGC CAACCTGGCC GGCGAGCGTC TGGGCAGCGT GACCCGCCGC
ATCGAAGAGA TCAACGGCAT GAACCAGTCG GTCGCGGCGG CAACCGAGGA ACAGACCTCG
GTGGTCGAGT CGATCAATGT CGACATCACT CACATCAACA CCCTCAACCA GCTGGGTGTC
GACAACCTGC GCCAGACCCT GGAAGCCTGC AACTCGCTGG AAGAGCAGGC TGCCCGCCTG
CAGCAACTGG TAGGCAGCTT CCGGATCTGA
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| Protein sequence | MKSLGFSKKI LLAAALIVVV AFSVFIVVND YRQRQSLKSS VKSELQQLGT LTTQNIQTWL
ESRMQLLQSM SQQIAADGKE LPQLQRAIGL PAYSESFQLS YFGSTEGVMF SVPSANRPAD
YDPRARGWYK AAQNAPGTIV TEPYIAASSG KLVMTMATPV KFQNQFVGVA GADIALDNVT
KIINSLNFDG HGYAFLVSAD GKILVHPDSK LVLKNISEAY PTNTPKITTG VTEIDSGKNP
EIISFTPVQG VSTANWYVAL VLEQDSAYAM LAEFRASAIT AMVVVVVVII LLLGLLIRVL
MQPLHQMGRA MRDIADGEGD LTKRLAITSQ DEFGELAESF NRFVERIHTS IREVASTAAQ
LGEVATRVVK VSNASMGNSD QQANRTESVA AAINELGAAA QEIAQNAART SQQSSDASGL
ASDGQNVVQQ TIKAMNELSG KISESCVNIE SLNGKTANIG QILEVITSIS QQTNLLALNA
AIEAARAGEA GRGFAVVADE VRNLAHRTQD SAQQVQTMIE ELQVGARDAV TNMTESQRQS
EDSVGIANLA GERLGSVTRR IEEINGMNQS VAAATEEQTS VVESINVDIT HINTLNQLGV
DNLRQTLEAC NSLEEQAARL QQLVGSFRI
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