Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_4876 |
Symbol | pctA |
ID | 5354851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 5029634 |
End bp | 5031523 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640813922 |
Product | chemotactic transducer PctA |
Protein accession | YP_001350212 |
Protein GI | 152986167 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.647167 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAAA GTCTGAAGTT CAGCCACAAG ATCCTCCTCG CGGCCTCCCT CGTGGTGTTC GCCGCCTTCG CACTGTTCAC CCTCTACAAC GACTACCTGC AACGCAACGC GATCCGCGAG GACCTCGAAA GCTACCTGCG GGAAATGGGC GACGTGACTT CCAGCAACAT CCAGAACTGG CTGGGCGGCC GCCTGCTGCT GGTCGAGCAG ACCGCACAGA CCCTGGCCCG TGACCACGCC CCGGAAAATG TCAGCGCCCT GCTCGAGCAG CCGGTGCTGG CCTCGACCTT CAGCTTCACC TACCTCGGCC AGCAGGACGG CGCCTTCACC ATGCGTCCGG ACAGCCCGAT GCCGGCCGGC TACGACCCAC GCACCCGCCC CTGGTACAAG GATGCCGTGG CTGCCGGCGG CCTGACCCTG ACCGAACCCT ACGTCGACGC CGCCACCCGG GAACTGATCA TCACCGCGGC AACGCCGGTG AAGGCCGCCG GCAACACCCT CGGCGTGGTC GGCGGCGATC TCAGCCTGAA GACCCTGGTA CAGATCATCA ATTCGCTGGA CTTCAGCGGC ATGGGCTACG CCTTCCTGGT CAGCGGCGAC GGCAAGATCC TCGTCCATCC GGACAAAGAG CAGGTGATGA AGACCCTGGG CGAGATCTAC CCGCAGAACA CGCCGAAGAT CGCCGCCGGT TTCAGCGAGG CCGAACTGCA CGGGCATGCC CGCATCCTCG CCTTCACCCC GATCAAGGGC CTGTCCGGCC TGAACTGGTA CATCGGCATC TCGGTGGACA AGGACAAGGC CTACGCCATG CTCAGCAAGT TCCGCGTCTC GGCTATCGCC GCCGCGCTGA TCTCGATCGT CGCCATCCTG CTCCTGCTCG GCCTGCTGAT CCGCCTGCTG ATGCAGCCGC TGCACCTGAT GGGCCGAGCC ATGCAGGACA TCGCCCAGGG CGAGGGCGAC CTGACCAAAC GCCTGAACGT GACCAGCCAC GACGAGTTCG GCGTGCTCGG CGAGGCCTTC AATCAGTTCG TCGAGCGCAT CCATCGCTCG ATCCGCGAGG TCGCCGGGAC GGCGCACAAG CTGCACGACG TCTCGCAACT GGTGGTCAAC GCCTCGAACT CGTCGATGGC CAATTCCGAC GAGCAGTCCA ACCGCACCAA CAGCGTCGCC GCCGCGATCA ACGAACTCGG CGCCGCTGCC CAGGAAATCG CCCGCAACGC CGCCGACGCC TCGCACCATG CTTCCGACGC CAACCACCAG GCCGAGGACG GCAAGCAGGT GGTCGAGCAG ACCATCCGCG CGATGAACGA GCTGTCCGAG AAGATCAGCG CTTCCTGCGC CAACATCGAG GCGCTGAACA GCCGCACGGT GAACATCGGG CAGATCCTCG AGGTGATCAA GGGCATCTCC GAGCAGACCA ACCTGCTCGC CCTCAACGCC GCCATCGAGG CCGCCCGCGC CGGCGAGGCC GGGCGCGGCT TCGCGGTGGT CGCCGACGAG GTGCGCAACC TCGCGCACCG TGCCCAGGAA TCGGCGTTGC AGATCCAGAA GATGATCGAG GAACTGCAGG TCGGCGCCCG CGAAGCGGTG GCCACCATGA CCGAGAGCCA GCGCTACAGC CTGGAGAGCG TGGAAATCGC CAACCGCGCC GGCGAACGCC TGGGCAGCGT GACCAGCCGG ATCGGCGAGA TCGACAGCAT GAACCAGTCG GTGGCCACCG CCACCGAGGA GCAGACCGCC GTGGTCGACT CGCTGAACAT GGACATCACC GAGATCAACA CCCTCAACCA GGAAGGCGTG GAGAACCTCC AGGCCACCCT GCGCGCCTGC GGCGAGCTGG AAGCCCAGGC CGGGCGCCTG CGGCAACTGG TGGACAGCTT CAAGATCTGA
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Protein sequence | MIKSLKFSHK ILLAASLVVF AAFALFTLYN DYLQRNAIRE DLESYLREMG DVTSSNIQNW LGGRLLLVEQ TAQTLARDHA PENVSALLEQ PVLASTFSFT YLGQQDGAFT MRPDSPMPAG YDPRTRPWYK DAVAAGGLTL TEPYVDAATR ELIITAATPV KAAGNTLGVV GGDLSLKTLV QIINSLDFSG MGYAFLVSGD GKILVHPDKE QVMKTLGEIY PQNTPKIAAG FSEAELHGHA RILAFTPIKG LSGLNWYIGI SVDKDKAYAM LSKFRVSAIA AALISIVAIL LLLGLLIRLL MQPLHLMGRA MQDIAQGEGD LTKRLNVTSH DEFGVLGEAF NQFVERIHRS IREVAGTAHK LHDVSQLVVN ASNSSMANSD EQSNRTNSVA AAINELGAAA QEIARNAADA SHHASDANHQ AEDGKQVVEQ TIRAMNELSE KISASCANIE ALNSRTVNIG QILEVIKGIS EQTNLLALNA AIEAARAGEA GRGFAVVADE VRNLAHRAQE SALQIQKMIE ELQVGAREAV ATMTESQRYS LESVEIANRA GERLGSVTSR IGEIDSMNQS VATATEEQTA VVDSLNMDIT EINTLNQEGV ENLQATLRAC GELEAQAGRL RQLVDSFKI
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