Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_4877 |
Symbol | pctB |
ID | 5359601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 5031737 |
End bp | 5033626 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640813923 |
Product | chemotactic transducer PctB |
Protein accession | YP_001350213 |
Protein GI | 152989516 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.164155 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAAA GTCTCAAGTT CAGCCACAAG ATCCTGCTCG CCGCCGCCCT GGTGGTGATC GCGACCTTCT CCCTGTTCAC CCTCTACAAC GACTCCCTGC AGCGCACCTC GATCCGCGAG GACCTCGAGG ATTACCTGCA CGAAATGGGC GAGATCACCG CCAGCAACGT GCAGAACTGG CTGAGCGGGC GCATCCTGCT GATCGAGAAC CTGGCCCAGA CCCTGGCCCG CGACCACAGC CCGGAAACCA CCCAGGCCCT GCTGGAACAG CCGCTGCTGG GCTCGACCTT CCTCTTCACC TACCTGGGAC AGACCGACGG TACCTATACC GCGCGCCCCA CCAGCGACCT GCCGGCCGAC TACGATCCGC GCCGCCGCCC CTGGTACAAC GCCGCCACCA GCGCCGGCCA GACCACCCTC ACCGAACCCT ATATGGAGCC GGCCATCCAT GAGCTGGTGC TGACCATCGC CAGCCCGGCG CGCCAGGGCG GCCAGCCGTT CGGCGTGGTC GGCGGCGACC TCAGCCTGCA GACGGTGGTG AAGATCATCA ACTCGCTGGA CTTCGGTGGC ATGGGCTACG CCTTCCTGGT CAGCGGCGAC GGCAAGATCC TCGTCCATCC GGACAAGGAC CAGGTGATGA AGAACCTCAG CGACGTCTAC CCACGCAACA CGCCGAAGAT CGGCAGTGGT TTCAGCGAGG CCGAACTGCA AGGCAACACC CGCATCCTCA GCTTCTCCCC GGTCAAGGGC CTGTCCGGCC TGAACTGGTA CATCGGCATT TCGGTGGACA AGGACAAGGC CTACGCCATG CTCACCAAGC TGCGCACCTC GGCCATCGTC GCCGCGCTGA TCGCGGTGGT GGCCATCGTG CTCCTGCTGG GTATGCTGAT CCGCGTGCTG ATGCAGCCGC TCACCGACAT GGGCCGCGCC ATGCAGGACA TCGCCCAGGG CGAGGGCGAC CTGACCAAGC GCCTGAAGGT CACCAGCAAC GATGAATTCG GCGCCCTGGC GATCGCCTTC AACCGTTTCG TCGAGCGCAT CCACGAGTCG ATCCGCGAGG TCGCCGGCAC CGCCCGCCAG TTGCACGACG TGGCGCAACT GGTGGTCAAC GCCTCGAACT CGTCGATGGC CAATTCCGAC GAGCAGTCCA ACCGCACCAA CAGCGTCGCC GCCGCGATCA ACGAACTCGG CGCCGCTGCC CAGGAAATCG CCCGCAACGC CGCCGACGCC TCGCACCATG CTTCCGACGC CAACCACCAG GCCGAGGACG GCAAGCAGGT GGTCGAGCAG ACCATCCGCG CGATGAACGA GCTGTCCGAG AAGATCAGCG CTTCCTGCGC CAACATCGAG GCGCTGAACA GCCGCACGGT GAACATCGGG CAGATCCTCG AGGTGATCAA GGGCATCTCC GAGCAGACCA ACCTGCTCGC CCTCAACGCC GCCATCGAGG CCGCCCGCGC CGGCGAGGCC GGGCGCGGCT TCGCGGTGGT CGCCGACGAG GTGCGCAACC TCGCGCACCG CGCCCAGGAG TCGGCGCAGC AGATCCAGAA GATGATCGAG GAACTGCAGG TCGGCGCCCA GGAAGCCGTC AGCACCATGA CCGAGAGCCA GCGCTACAGC CTGGAAAGCG TGGAGATCGC CAACCGCGCC GGCGAACGCC TGAGCAGCGT CACTGGCCGG ATCGCCGAGA TCGACGGGAT GAACCAGTCG GTGGCCACCG CCACCGAGGA ACAGACCGCC GTGGTCGACT CGCTGAACAT GGACATCACC GAGATCAACA CCCTCAACCA GGAAGGCGTG GAGAACCTCC AGGCCACCCT GCGCGCCTGC GGCGAGCTGG AGACCCAGGC CGGGCGCCTG CGGCAGTTGG TGGACAGCTT CAAGATCTGA
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Protein sequence | MIKSLKFSHK ILLAAALVVI ATFSLFTLYN DSLQRTSIRE DLEDYLHEMG EITASNVQNW LSGRILLIEN LAQTLARDHS PETTQALLEQ PLLGSTFLFT YLGQTDGTYT ARPTSDLPAD YDPRRRPWYN AATSAGQTTL TEPYMEPAIH ELVLTIASPA RQGGQPFGVV GGDLSLQTVV KIINSLDFGG MGYAFLVSGD GKILVHPDKD QVMKNLSDVY PRNTPKIGSG FSEAELQGNT RILSFSPVKG LSGLNWYIGI SVDKDKAYAM LTKLRTSAIV AALIAVVAIV LLLGMLIRVL MQPLTDMGRA MQDIAQGEGD LTKRLKVTSN DEFGALAIAF NRFVERIHES IREVAGTARQ LHDVAQLVVN ASNSSMANSD EQSNRTNSVA AAINELGAAA QEIARNAADA SHHASDANHQ AEDGKQVVEQ TIRAMNELSE KISASCANIE ALNSRTVNIG QILEVIKGIS EQTNLLALNA AIEAARAGEA GRGFAVVADE VRNLAHRAQE SAQQIQKMIE ELQVGAQEAV STMTESQRYS LESVEIANRA GERLSSVTGR IAEIDGMNQS VATATEEQTA VVDSLNMDIT EINTLNQEGV ENLQATLRAC GELETQAGRL RQLVDSFKI
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