Gene VIBHAR_06314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_06314 
Symbol 
ID5557999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp1490103 
End bp1491974 
Gene Length1872 bp 
Protein Length623 aa 
Translation table11 
GC content47% 
IMG OID640910787 
Producthistidine kinase 
Protein accessionYP_001448432 
Protein GI156977526 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTA GACATAAGGT TGTCACCGCC TCTTCTATTT TATTGCTTGT GACTGTGGCG 
TTGCTGTCGA CACAACAAGT TATGACTATC CGTTCACAGA TCGAAGAAAA CATCGATACC
AGTGTGAGTG AGATCCTATC CAGTGTGGGG AACACGGTAG AATCGGAAAT GAACGCTAAG
AAAGAACTCG CTCAATCCAT GACTGAGATT CTTGAAATTA ACCCAAGCGA CCACGGTTAC
GTGAAAGATG TGCTAGAGAA ACCAATGCCA AAATCAAGCT TCTTGGCCAT AGGTTATGCT
TACGACAGCA ACGGATTCGT GATTGAAAAC GATGATGGTT GGGAAGCCAG TCCAGATTAC
GACCCTCGTG TTCGCCCTTG GTTTGTTTCA GCAAAAGCAC AAGGCAAACT CGTCGTAACG
GATCCATACG TCGACGTTTC TTCTAAGAAA GTGATCATCT CTATCGGTAC TCCAGTGCGC
GAAGCTGGCC AGTTCCTCGC AGCCATGTTT TACGATATGG AGCTAACCAC CCTTTCTGAC
TTGGTTAACC AAGTAAACCT ATTTGATGCG GGTTACCTTT TCCTAGTAAC GGCAGATGGC
ACGACGATCG CGCACCCAGA AGCCAAATAC AACGGCGAGA AGCTCTCAAG CTACCTACCA
CAAGTAGAGC TAGCATCAGG AGCTCAGCAC ATCGAGATGA ACGGCGACAA ATTCATGGTC
AGCCTAACCC ACATCCCAAG TGAAAACTGG TATGTAGGTG CAGTTGTTGA TGAGAGCATT
GCGTATGCTG CAGTAGGTAA GCTGCGTAAT AGCGCAATCA TCTACTCATT GATTGCTGTG
ATTGCCTCTA TCATTGCGCT GACTATCCTT ATCCGTACCT TGATGCGCCC TCTTGATGAG
CTAAACACTG CAATCCAAGC TGTAGCATCA GGCAAAGGCG ATTTGACGCA GCGCTTGGAT
ACCAACACAG ATCAAGAATT CTCTGAGCTG GCAAAAGGTT TCAACACCTT TATGGAGAAC
TTGCAGCATC AAATCATCGA ATCGAAGAGC ATTTCTGATC AGATCCTAAG TGGCACGCAA
ATCACCGCTG AAGGCGCTCG TGATTCTGCT TCTGCAATTC AAACTCAGCT TCAAGAGCTT
GAACAGTTGG CGACAGCAAT GCACGAGATG TCGGTAACGG CAACAGAAGT TGCTAACAAC
GCACAAGGCG CAGCAAGTGC AGCGAAAGAA GCGGACGAAG CGACAGTGCA AGGTTCTTCT
ATCGTGAATG AGTCGACTGA GACGATTAAC CTACTGTCAG ACAGCATCGA TCAAGCGGTA
GAGGAAGTAC AAGGTCTTGA GTCAGCAACA GCAAATATCG AGACGATCCT AAAAGTGATC
AACGATATCG CAGACCAAAC TAACCTACTG GCACTAAACG CAGCAATCGA GGCAGCCCGT
GCGGGAGAAT CTGGTCGTGG CTTTGCCGTT GTAGCGGATG AAGTTCGTAC ACTGGCGCAA
CGTACTCAAG AATCTACTAC AGAAATCCGT AGCATGATTG AGCAGCTTCA ATCTGGCGCT
TCCTCTGTTG CAAGTGCTAT GCACCAGAGC AAAGGCAGTG CAGTAGAAGC GGTAGAGAAA
GCAGAACACG CCAATGACGC TCTACAACGT ATCCGCGATG CGATTCAACG TATCTCTGAT
ATGAACCTAC AAATTGCGTC AGCAGCAGAA GAACAAAGCT TAGTAGCAGA AGAAATCAAC
AACAACACGG TTAACATTAA AGACCTGTCG ACCCAAGTTG CTGATTCAGC GAACCGCACC
AACGATGCAA TGCAAGCACA GCATGAAGAC GTTCGTAAGC AAGATGAGAT CCTAAACCGC
TTTACGGTTT AA
 
Protein sequence
MKFRHKVVTA SSILLLVTVA LLSTQQVMTI RSQIEENIDT SVSEILSSVG NTVESEMNAK 
KELAQSMTEI LEINPSDHGY VKDVLEKPMP KSSFLAIGYA YDSNGFVIEN DDGWEASPDY
DPRVRPWFVS AKAQGKLVVT DPYVDVSSKK VIISIGTPVR EAGQFLAAMF YDMELTTLSD
LVNQVNLFDA GYLFLVTADG TTIAHPEAKY NGEKLSSYLP QVELASGAQH IEMNGDKFMV
SLTHIPSENW YVGAVVDESI AYAAVGKLRN SAIIYSLIAV IASIIALTIL IRTLMRPLDE
LNTAIQAVAS GKGDLTQRLD TNTDQEFSEL AKGFNTFMEN LQHQIIESKS ISDQILSGTQ
ITAEGARDSA SAIQTQLQEL EQLATAMHEM SVTATEVANN AQGAASAAKE ADEATVQGSS
IVNESTETIN LLSDSIDQAV EEVQGLESAT ANIETILKVI NDIADQTNLL ALNAAIEAAR
AGESGRGFAV VADEVRTLAQ RTQESTTEIR SMIEQLQSGA SSVASAMHQS KGSAVEAVEK
AEHANDALQR IRDAIQRISD MNLQIASAAE EQSLVAEEIN NNTVNIKDLS TQVADSANRT
NDAMQAQHED VRKQDEILNR FTV