Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06314 |
Symbol | |
ID | 5557999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 1490103 |
End bp | 1491974 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640910787 |
Product | histidine kinase |
Protein accession | YP_001448432 |
Protein GI | 156977526 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTA GACATAAGGT TGTCACCGCC TCTTCTATTT TATTGCTTGT GACTGTGGCG TTGCTGTCGA CACAACAAGT TATGACTATC CGTTCACAGA TCGAAGAAAA CATCGATACC AGTGTGAGTG AGATCCTATC CAGTGTGGGG AACACGGTAG AATCGGAAAT GAACGCTAAG AAAGAACTCG CTCAATCCAT GACTGAGATT CTTGAAATTA ACCCAAGCGA CCACGGTTAC GTGAAAGATG TGCTAGAGAA ACCAATGCCA AAATCAAGCT TCTTGGCCAT AGGTTATGCT TACGACAGCA ACGGATTCGT GATTGAAAAC GATGATGGTT GGGAAGCCAG TCCAGATTAC GACCCTCGTG TTCGCCCTTG GTTTGTTTCA GCAAAAGCAC AAGGCAAACT CGTCGTAACG GATCCATACG TCGACGTTTC TTCTAAGAAA GTGATCATCT CTATCGGTAC TCCAGTGCGC GAAGCTGGCC AGTTCCTCGC AGCCATGTTT TACGATATGG AGCTAACCAC CCTTTCTGAC TTGGTTAACC AAGTAAACCT ATTTGATGCG GGTTACCTTT TCCTAGTAAC GGCAGATGGC ACGACGATCG CGCACCCAGA AGCCAAATAC AACGGCGAGA AGCTCTCAAG CTACCTACCA CAAGTAGAGC TAGCATCAGG AGCTCAGCAC ATCGAGATGA ACGGCGACAA ATTCATGGTC AGCCTAACCC ACATCCCAAG TGAAAACTGG TATGTAGGTG CAGTTGTTGA TGAGAGCATT GCGTATGCTG CAGTAGGTAA GCTGCGTAAT AGCGCAATCA TCTACTCATT GATTGCTGTG ATTGCCTCTA TCATTGCGCT GACTATCCTT ATCCGTACCT TGATGCGCCC TCTTGATGAG CTAAACACTG CAATCCAAGC TGTAGCATCA GGCAAAGGCG ATTTGACGCA GCGCTTGGAT ACCAACACAG ATCAAGAATT CTCTGAGCTG GCAAAAGGTT TCAACACCTT TATGGAGAAC TTGCAGCATC AAATCATCGA ATCGAAGAGC ATTTCTGATC AGATCCTAAG TGGCACGCAA ATCACCGCTG AAGGCGCTCG TGATTCTGCT TCTGCAATTC AAACTCAGCT TCAAGAGCTT GAACAGTTGG CGACAGCAAT GCACGAGATG TCGGTAACGG CAACAGAAGT TGCTAACAAC GCACAAGGCG CAGCAAGTGC AGCGAAAGAA GCGGACGAAG CGACAGTGCA AGGTTCTTCT ATCGTGAATG AGTCGACTGA GACGATTAAC CTACTGTCAG ACAGCATCGA TCAAGCGGTA GAGGAAGTAC AAGGTCTTGA GTCAGCAACA GCAAATATCG AGACGATCCT AAAAGTGATC AACGATATCG CAGACCAAAC TAACCTACTG GCACTAAACG CAGCAATCGA GGCAGCCCGT GCGGGAGAAT CTGGTCGTGG CTTTGCCGTT GTAGCGGATG AAGTTCGTAC ACTGGCGCAA CGTACTCAAG AATCTACTAC AGAAATCCGT AGCATGATTG AGCAGCTTCA ATCTGGCGCT TCCTCTGTTG CAAGTGCTAT GCACCAGAGC AAAGGCAGTG CAGTAGAAGC GGTAGAGAAA GCAGAACACG CCAATGACGC TCTACAACGT ATCCGCGATG CGATTCAACG TATCTCTGAT ATGAACCTAC AAATTGCGTC AGCAGCAGAA GAACAAAGCT TAGTAGCAGA AGAAATCAAC AACAACACGG TTAACATTAA AGACCTGTCG ACCCAAGTTG CTGATTCAGC GAACCGCACC AACGATGCAA TGCAAGCACA GCATGAAGAC GTTCGTAAGC AAGATGAGAT CCTAAACCGC TTTACGGTTT AA
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Protein sequence | MKFRHKVVTA SSILLLVTVA LLSTQQVMTI RSQIEENIDT SVSEILSSVG NTVESEMNAK KELAQSMTEI LEINPSDHGY VKDVLEKPMP KSSFLAIGYA YDSNGFVIEN DDGWEASPDY DPRVRPWFVS AKAQGKLVVT DPYVDVSSKK VIISIGTPVR EAGQFLAAMF YDMELTTLSD LVNQVNLFDA GYLFLVTADG TTIAHPEAKY NGEKLSSYLP QVELASGAQH IEMNGDKFMV SLTHIPSENW YVGAVVDESI AYAAVGKLRN SAIIYSLIAV IASIIALTIL IRTLMRPLDE LNTAIQAVAS GKGDLTQRLD TNTDQEFSEL AKGFNTFMEN LQHQIIESKS ISDQILSGTQ ITAEGARDSA SAIQTQLQEL EQLATAMHEM SVTATEVANN AQGAASAAKE ADEATVQGSS IVNESTETIN LLSDSIDQAV EEVQGLESAT ANIETILKVI NDIADQTNLL ALNAAIEAAR AGESGRGFAV VADEVRTLAQ RTQESTTEIR SMIEQLQSGA SSVASAMHQS KGSAVEAVEK AEHANDALQR IRDAIQRISD MNLQIASAAE EQSLVAEEIN NNTVNIKDLS TQVADSANRT NDAMQAQHED VRKQDEILNR FTV
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