Gene VSAL_I0799 details

Gene Information

• Locus tag: VSAL_I0799
• ID: 6988897
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: -
• Start bp: 885635
• End bp: 887509
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 643379204
• Product: methyl-accepting chemotaxis protein
• Protein accession: YP_002262309
• Protein GI: 209694381
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTAA AACATAAATT AATCGGGGCC AGTCTACTTG CTGTTATCGT GACGGCTGCT 
GCATTAACAT GGCTCGCGTC AAATCAGTTG TTTGAACAAA CTCGAAATGG CGTTTATTCT 
CGAGCTGAAA GTGTGACATC TTCTGCCACT ACCGGAATTT CTAATTGGAT TTCAATTAAA 
GCTGAAATTG CGCATGCTAT TAATGACTAC ACTCAAGAAG ATGACGTGGT CTCTTTTTTA 
CAGTTAAGCC GTAAAGCGGG TGGTTTTGAT AATATTTTCT TTGGTACACC TCAAGGGGAT 
ATGTACCGCT CTCATCCTGA AAGAAATCGT GCCGATTACG ATCCTCGTCA ACGCCCTTGG 
TATCAAGAAG CTCAACGAGA AAACAAACAA ATCATTACTT CCGCCTATCA AGATGCCATT 
ACTCAATCTC TTCTGGTAAC CATTGCTGAA CCTGTTTATA AGAATGGTCA ATTTCTTGGT 
GTTGTCGGTG CCGATGTACT AATTGATCAA CTAATTGACG ATGTCATCAG CCTAGATGCA 
GGTAAAGACA CCATCACAAT GTTAATTGAT AGCGATGGCA CTTTCTTAAC GCATCCAAAT 
ACGTCGCTTA TCAAAAAAGA AGTAAATCGT TATTTCTCGG GTATGACGCC TCAAAGTATT 
CAAGAATCCA TTAATTCAAA AACCATTGAA TTCGCAGAAA TCAACGGCAG TAATAAGCTG 
GTTTATTTTG CAAAAGTACC TAATACAAAA TGGACATTTG CCGTTGAAAT GACACAAGCA 
ACAGAAGAAG CCGCACACAG CGCACTCCTT CGTGAAATCA TCCTGCTTAG CATTGTATTA 
ACAGTCATTG TTGTTATCGG TGTAACCACC TTGGTTAACG TCCTATTTAG AGATCTACTT 
CGAGTATCTG ATGCGCTTGC TGAAATTTCA TCAGGTGAAG GGGATTTAAC TCAACGTTTA 
ATTCCAAACA GTAATGATGA AGTTGGCCAA CTTGCTATCA ACTTCAATAC CTTTGTGGGC 
AATATGCACT CAATGGTGTG TCGCTTACGT GACATATCAC TTACGTTAGC TAACCAAGCC 
AATTTAACCG CAGAAAGTGC TGAAGAACGT AATGTTCGAA TCCAACATCA AATGGATGAG 
ATCAACATGG TTGCAACCGC AATTAATGAA ATGGCAGCTG CGACTCAAGA AATTGCAAGC 
AACGCAGATA ATACAGCTCA AACAGCTGAA CAAACCGTTA GTGCTTCAAA CCATGGTGCT 
GAGCAAGTAA GTCAAAGCCA ACATTCAATT GATAACTTGG CAAAAGAAGT AGAAACCGCA 
ACACAAGTTA TCGGCGAATT GCATCACAAC GCACAAAACA TCAATACGAT CCTATCCACC 
ATTCAAAACA TTGCAGAACA AACGAACTTA CTCGCACTCA ATGCCGCAAT TGAAGCGGCA 
CGTGCCGGTG AACAAGGTCG TGGTTTTGCC GTTGTTGCTG ATGAAGTTCG AATTTTAAGT 
CAACGTACAC ACGCGTCGAC TCAAGAAATT CAACAAATGA TAGAGACATT GCAAGGCACA 
ACTCAAAAAG CGGTTGGCAT CATGGAAGAC AGCCAAAATC TAGCCAACAC CAGTGTTGAA 
GATGCACAAT CAGCCTCTGC TAGTTTGCTT CAGATTACAA ATTCAGTGAC ATTAATTAGC 
GACATGGCGG CTCAAATTGC AGCGGCGGCT GAAGAGCAAT CATCGGTTAC AGAAGAAATT 
ACGCGTAACA CCGAAGCGGT TCGTGATGTA TCAAATGAAT TAACGACCGA AACACAGCAA 
TCGGTTATTC AAGCATCACA ATTATCTGAA TTATCAAACG AACTAAAACA AGAAATAGAC 
AGATTTAAAC TGTAA 

 

Protein sequence

MKLKHKLIGA SLLAVIVTAA ALTWLASNQL FEQTRNGVYS RAESVTSSAT TGISNWISIK 
AEIAHAINDY TQEDDVVSFL QLSRKAGGFD NIFFGTPQGD MYRSHPERNR ADYDPRQRPW 
YQEAQRENKQ IITSAYQDAI TQSLLVTIAE PVYKNGQFLG VVGADVLIDQ LIDDVISLDA 
GKDTITMLID SDGTFLTHPN TSLIKKEVNR YFSGMTPQSI QESINSKTIE FAEINGSNKL 
VYFAKVPNTK WTFAVEMTQA TEEAAHSALL REIILLSIVL TVIVVIGVTT LVNVLFRDLL 
RVSDALAEIS SGEGDLTQRL IPNSNDEVGQ LAINFNTFVG NMHSMVCRLR DISLTLANQA 
NLTAESAEER NVRIQHQMDE INMVATAINE MAAATQEIAS NADNTAQTAE QTVSASNHGA 
EQVSQSQHSI DNLAKEVETA TQVIGELHHN AQNINTILST IQNIAEQTNL LALNAAIEAA 
RAGEQGRGFA VVADEVRILS QRTHASTQEI QQMIETLQGT TQKAVGIMED SQNLANTSVE 
DAQSASASLL QITNSVTLIS DMAAQIAAAA EEQSSVTEEI TRNTEAVRDV SNELTTETQQ 
SVIQASQLSE LSNELKQEID RFKL