Gene Rfer_3449 details

Gene Information

• Locus tag: Rfer_3449
• ID: 3962556
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007908
• Strand: -
• Start bp: 3837155
• End bp: 3839053
• Gene Length: 1899 bp
• Protein Length: 632 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 637918268
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_524688
• Protein GI: 89902217
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTGCAT CGATTCGATC GCGCCTGATT GGCATCAGTG TGTTGGTTGT GATTTTGGCG 
GTTGTTACCG CCACGTTGGT CAGCTACAGC TTGGCGCGTG GTTTCTTACT TGAGGACATT 
GCTGCCAACT TGGCACAAAC GGCCAAGGCT GAGGGTAAGC GTATTGGCTT GTGGGCAAAA 
ATGCAAAAGG ACATAGTGAC CTCGATGGCA ACACAAGCCA ACGCAGTCGA TCCCAATGTT 
GGTTTGCAGC AGGCAATCGA TGCCGGAAAG CTGGACCTTG CCTACGTCGG TCATGCCGAC 
AAACGCATGA TATCGGTGCC ATCTCGGAAT CGGCCGGCGG ATTACGACCC AACTGCACGT 
CCCTGGTACA AGCTGGCCGA TAGCCAGGGT AAAGCCGTTC TCACCGCACC TTATATCGGA 
GCATCCAGCA AGAAGCTGGT CGTATCTTTT GCATATCCCG TCAAGGAAGG ATCCAACACT 
GTGGCTGTGG TAGCAACAGA TGTCGCGCTG GAAGATGTTC TAAAAGACTT GCAGCAAATT 
AAGCCGACAG CCAGCGGATT TGCATTTATT GTGGACAAGG ACGGAAAGAT CATTGCCCAC 
CCTCGCGCCG AACTCACACT TAAGCCCCTG GCAGAGCTTT CCAAAGATTT AACTCCAGAC 
GTGATATCAC GCGCGCTGAA AGAGGGGGCC GAACCACCAC GGGCCCAAAT TGACGGAAAT 
GGGTTTTTGC TAAAGGGAAC ACCGGTACCA GAAACCGACT GGACCTTGGT AACCGCAGCC 
AGCGAGAGCG AAGCCTTGGC GCGCTTGAAT CAGTTGCTTA CGTATGCTGC GCTGACCATT 
GTTGCCGTTG GAATTGCAGC GGCACTTCTT TCGATGGGTG TTGTAAACCA TCTGCTTGGC 
GGTCTTGTGA GGATACGGGA TGCGATGCGA GAGATCGGCT CTGGTTCAGG AGATTTGACT 
CAGCGCCTTC CCGTCCAAGG GCGGGATGAA ATTTCCGAGA TGGCGCAGGC TTTCAATGAG 
TTTGTTCAGA AGACCGAGCA GGTTATGCGT GATGTGCGTT CCAGCAGCGC ATCCATCGCA 
AACGCCTCCC GAGAAGTCGC TGCAGGCTCT CTGGATTTAA GCAATCGAAC TGAGCAAACG 
GCCAGCAGTT TGGAGGAAAC GGCGGCATCC ATGCAGGAAT TGACGGAGAC GGTGCGGCAT 
AGCGCCGATT CAGCGAATAT GGCCAATCAG CTTGCTGGCA GTGCTAGCCA AATAGCACAC 
CGTGGTGGAG AGGTTGTGTC GCAGGTGGTT TCCACAATGA ACGACATCTC CACCAGTTCA 
GCCAGGATAT CTGACATCAT CCAAGTCATT GACGGTATTG CGTTCCAGAC CAATATCCTC 
GCGCTCAATG CTGCGGTAGA GGCTGCGCGT GCTGGTGAAC AGGGCCGCGG ATTTGCCGTG 
GTGGCCAGCG AAGTGCGCAG TCTTGCTGGA CGCTCCGCTG AAGCAGCAAA AGAGATCAAG 
AGTCTCATCG TCAATAGCGT TGAGCGAGTC GAAGCAGGTA TCAGTCTAGT CGCTGCGGCA 
GGCCAGACCA TGAATGAGAT TGTTCAGAGC ATTGGAAAGG TGTCAGAGAT CGTTGGTGAT 
ATCAGCTCGC AGACATCTGA TCAACGGCAT GGCATTGATG AAATCAATGC TGCTATCCGG 
CAACTCGATC AGATGACGCA ACAGAACGCT GCGCTGGTGG AAGAGTCAAC GGCTGCTGCC 
GACAGCATGA GTGATCAGGC ACAGCGCTTG GCCCAAGTGG TGGCCGCGTT CAAACTCAGC 
GATACCCAAA ATACTCCAAT GAGTCGGCCT TTTCGAACTG AACCAGTCCG GATCAAAGCA 
CCATCGGTCC TTGAGCACTG TGGGCCCCTC CAGCTTTAA 

 

Protein sequence

MFASIRSRLI GISVLVVILA VVTATLVSYS LARGFLLEDI AANLAQTAKA EGKRIGLWAK 
MQKDIVTSMA TQANAVDPNV GLQQAIDAGK LDLAYVGHAD KRMISVPSRN RPADYDPTAR 
PWYKLADSQG KAVLTAPYIG ASSKKLVVSF AYPVKEGSNT VAVVATDVAL EDVLKDLQQI 
KPTASGFAFI VDKDGKIIAH PRAELTLKPL AELSKDLTPD VISRALKEGA EPPRAQIDGN 
GFLLKGTPVP ETDWTLVTAA SESEALARLN QLLTYAALTI VAVGIAAALL SMGVVNHLLG 
GLVRIRDAMR EIGSGSGDLT QRLPVQGRDE ISEMAQAFNE FVQKTEQVMR DVRSSSASIA 
NASREVAAGS LDLSNRTEQT ASSLEETAAS MQELTETVRH SADSANMANQ LAGSASQIAH 
RGGEVVSQVV STMNDISTSS ARISDIIQVI DGIAFQTNIL ALNAAVEAAR AGEQGRGFAV 
VASEVRSLAG RSAEAAKEIK SLIVNSVERV EAGISLVAAA GQTMNEIVQS IGKVSEIVGD 
ISSQTSDQRH GIDEINAAIR QLDQMTQQNA ALVEESTAAA DSMSDQAQRL AQVVAAFKLS 
DTQNTPMSRP FRTEPVRIKA PSVLEHCGPL QL