More than 300 homologs were found in PanDaTox collection
for query gene PSPTO_1061 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009656  PSPA7_4874  chemotactic transducer PctC  58.66 
 
 
632 aa  722    Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_002947  PP_1371  methyl-accepting chemotaxis transducer  59.74 
 
 
624 aa  701    Pseudomonas putida KT2440  Bacteria  normal  normal  0.318672 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  71.66 
 
 
643 aa  918    Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_010501  PputW619_1011  methyl-accepting chemotaxis sensory transducer with Cache sensor  60.22 
 
 
624 aa  704    Pseudomonas putida W619  Bacteria  normal  0.752503  hitchhiker  0.0000000000251926 
 
 
-
 
NC_004578  PSPTO_1061  methyl-accepting chemotaxis protein  100 
 
 
626 aa  1263    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.646209  n/a   
 
 
-
 
NC_004578  PSPTO_2480  methyl-accepting chemotaxis protein  55.43 
 
 
629 aa  665    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  64.48 
 
 
625 aa  800    Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_007005  Psyr_0906  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  95.69 
 
 
626 aa  1189    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2246  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  54.7 
 
 
629 aa  649    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.265681  normal  0.412954 
 
 
-
 
NC_007005  Psyr_3534  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  58.95 
 
 
629 aa  705    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.667463  normal  0.0882884 
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  77.64 
 
 
626 aa  986    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  58.15 
 
 
630 aa  703    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4431  chemotaxis sensory transducer, Cache sensor  59.52 
 
 
629 aa  724    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  73 
 
 
626 aa  914    Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_010501  PputW619_0425  methyl-accepting chemotaxis sensory transducer with Cache sensor  56.87 
 
 
630 aa  680    Pseudomonas putida W619  Bacteria  normal  0.461628  normal 
 
 
-
 
NC_010322  PputGB1_4443  methyl-accepting chemotaxis sensory transducer with Cache sensor  59.74 
 
 
624 aa  698    Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.0000033578 
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  71.82 
 
 
628 aa  918    Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_009512  Pput_4352  methyl-accepting chemotaxis sensory transducer  59.74 
 
 
624 aa  699    Pseudomonas putida F1  Bacteria  normal  normal  0.0132701 
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  71.82 
 
 
628 aa  918    Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  65.02 
 
 
629 aa  815    Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  58.82 
 
 
632 aa  726    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  64.7 
 
 
629 aa  793    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  65.18 
 
 
629 aa  817    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  64.7 
 
 
629 aa  785    Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  35.28 
 
 
626 aa  370  1e-101  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0489  methyl-accepting chemotaxis sensory transducer  33.76 
 
 
698 aa  344  2e-93  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.000832175  normal 
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  35.11 
 
 
623 aa  336  7e-91  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  33.12 
 
 
627 aa  331  3e-89  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_009831  Ssed_3477  putative methyl-accepting chemotaxis protein  34.39 
 
 
622 aa  327  3e-88  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000522984 
 
 
-
 
NC_009052  Sbal_2364  methyl-accepting chemotaxis sensory transducer  36.2 
 
 
622 aa  327  3e-88  Shewanella baltica OS155  Bacteria  normal  0.493821  n/a   
 
 
-
 
NC_011989  Avi_0988  methyl-accepting chemotaxis protein  32.19 
 
 
695 aa  321  1.9999999999999998e-86  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  32.65 
 
 
623 aa  318  2e-85  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_009438  Sputcn32_2121  methyl-accepting chemotaxis sensory transducer  35.22 
 
 
622 aa  315  9.999999999999999e-85  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  33.44 
 
 
639 aa  314  3.9999999999999997e-84  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0316  methyl-accepting chemotaxis protein  34.17 
 
 
652 aa  310  5e-83  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1383  methyl-accepting chemotaxis sensory transducer  34.19 
 
 
636 aa  304  4.0000000000000003e-81  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00353653  normal  0.775857 
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  32.5 
 
 
630 aa  302  1e-80  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_1629  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.28 
 
 
623 aa  301  3e-80  Shewanella pealeana ATCC 700345  Bacteria  normal  0.438395  n/a   
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.65 
 
 
630 aa  301  3e-80  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  32.65 
 
 
630 aa  300  4e-80  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  32.65 
 
 
630 aa  300  5e-80  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  33.33 
 
 
633 aa  296  9e-79  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  33.49 
 
 
631 aa  296  1e-78  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  33.97 
 
 
630 aa  295  1e-78  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_4141  methyl-accepting chemotaxis sensory transducer  34.93 
 
 
623 aa  294  3e-78  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0712  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.04 
 
 
627 aa  294  3e-78  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0412159  hitchhiker  0.0000400753 
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  39.71 
 
 
638 aa  294  4e-78  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_011663  Sbal223_0194  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.93 
 
 
623 aa  293  5e-78  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0193  methyl-accepting chemotaxis sensory transducer  35.1 
 
 
623 aa  293  5e-78  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_4274  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.93 
 
 
623 aa  293  5e-78  Shewanella baltica OS195  Bacteria  normal  normal  0.179842 
 
 
-
 
NC_008322  Shewmr7_3825  methyl-accepting chemotaxis sensory transducer  35.65 
 
 
623 aa  290  4e-77  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  33.94 
 
 
636 aa  290  7e-77  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1741  methyl-accepting chemotaxis protein  33.22 
 
 
623 aa  288  2e-76  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  36.82 
 
 
638 aa  288  2e-76  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_009438  Sputcn32_0323  methyl-accepting chemotaxis sensory transducer  33.17 
 
 
623 aa  287  5e-76  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4454  methyl-accepting chemotaxis protein  37.45 
 
 
642 aa  286  7e-76  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_0271  methyl-accepting chemotaxis sensory transducer  36.96 
 
 
638 aa  286  7e-76  Shewanella sp. MR-4  Bacteria  normal  0.758035  hitchhiker  0.0000678809 
 
 
-
 
NC_009052  Sbal_0194  methyl-accepting chemotaxis sensory transducer  35.58 
 
 
623 aa  286  8e-76  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3950  methyl-accepting chemotaxis sensory transducer  35.31 
 
 
623 aa  286  8e-76  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3750  methyl-accepting chemotaxis sensory transducer  36.96 
 
 
638 aa  286  1.0000000000000001e-75  Shewanella sp. MR-7  Bacteria  normal  0.666265  normal  0.186245 
 
 
-
 
NC_008577  Shewana3_0272  methyl-accepting chemotaxis sensory transducer  36.77 
 
 
638 aa  285  2.0000000000000002e-75  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00090491  hitchhiker  0.000000349734 
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  32.03 
 
 
630 aa  284  3.0000000000000004e-75  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  31.92 
 
 
630 aa  283  6.000000000000001e-75  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.14 
 
 
626 aa  283  8.000000000000001e-75  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  32.39 
 
 
630 aa  282  1e-74  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_008321  Shewmr4_3752  methyl-accepting chemotaxis sensory transducer  35.53 
 
 
623 aa  281  3e-74  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  31.71 
 
 
630 aa  281  3e-74  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_004347  SO_4557  methyl-accepting chemotaxis protein  34.12 
 
 
623 aa  278  1e-73  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009783  VIBHAR_01884  hypothetical protein  32.24 
 
 
627 aa  279  1e-73  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_0275  methyl-accepting chemotaxis sensory transducer  36.58 
 
 
638 aa  278  2e-73  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0283  methyl-accepting chemotaxis sensory transducer  36.58 
 
 
638 aa  278  2e-73  Shewanella baltica OS195  Bacteria  normal  0.411591  normal 
 
 
-
 
NC_009052  Sbal_0282  methyl-accepting chemotaxis sensory transducer  36.58 
 
 
641 aa  278  2e-73  Shewanella baltica OS155  Bacteria  normal  0.0149105  n/a   
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.81 
 
 
626 aa  278  2e-73  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0279  methyl-accepting chemotaxis sensory transducer  36.58 
 
 
638 aa  278  2e-73  Shewanella baltica OS223  Bacteria  normal  0.983838  normal 
 
 
-
 
NC_010506  Swoo_0252  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.5 
 
 
623 aa  278  3e-73  Shewanella woodyi ATCC 51908  Bacteria  normal  0.866394  normal 
 
 
-
 
NC_012918  GM21_0525  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.57 
 
 
632 aa  276  7e-73  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009438  Sputcn32_0387  methyl-accepting chemotaxis sensory transducer  37.28 
 
 
638 aa  275  2.0000000000000002e-72  Shewanella putrefaciens CN-32  Bacteria  normal  0.408395  n/a   
 
 
-
 
NC_008700  Sama_3522  putative methyl-accepting chemotaxis sensory transducer  34.47 
 
 
636 aa  275  2.0000000000000002e-72  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  37.31 
 
 
638 aa  275  2.0000000000000002e-72  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_013456  VEA_003139  methyl-accepting chemotaxis protein  31.77 
 
 
627 aa  274  3e-72  Vibrio sp. Ex25  Bacteria  normal  0.116124  n/a   
 
 
-
 
NC_009783  VIBHAR_00119  methyl-accepting chemotaxis protein  31.93 
 
 
626 aa  274  3e-72  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011992  Dtpsy_2088  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.88 
 
 
617 aa  273  8.000000000000001e-72  Acidovorax ebreus TPSY  Bacteria  normal  0.258516  n/a   
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  37.08 
 
 
639 aa  273  8.000000000000001e-72  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_007511  Bcep18194_B1642  methyl-accepting chemotaxis sensory transducer  29.67 
 
 
599 aa  272  1e-71  Burkholderia sp. 383  Bacteria  normal  normal  0.255489 
 
 
-
 
NC_011312  VSAL_I0799  methyl-accepting chemotaxis protein  31.55 
 
 
624 aa  270  5e-71  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3111  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.22 
 
 
596 aa  269  1e-70  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_3992  methyl-accepting chemotaxis sensory transducer  29.78 
 
 
599 aa  268  2e-70  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  33.66 
 
 
638 aa  268  2e-70  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4375  methyl-accepting chemotaxis sensory transducer  29.78 
 
 
599 aa  268  2e-70  Burkholderia cenocepacia HI2424  Bacteria  normal  0.480091  normal 
 
 
-
 
NC_010086  Bmul_4247  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.98 
 
 
599 aa  266  5.999999999999999e-70  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3017  methyl-accepting chemotaxis sensory transducer  31.23 
 
 
630 aa  266  5.999999999999999e-70  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5980  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.62 
 
 
599 aa  264  3e-69  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  33.58 
 
 
713 aa  262  1e-68  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_007005  Psyr_2220  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  34.75 
 
 
646 aa  257  6e-67  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.071358  normal  0.520396 
 
 
-
 
NC_012880  Dd703_2920  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.02 
 
 
596 aa  256  7e-67  Dickeya dadantii Ech703  Bacteria  normal  0.115472  n/a   
 
 
-
 
NC_007908  Rfer_3449  methyl-accepting chemotaxis sensory transducer  30.35 
 
 
632 aa  256  8e-67  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  30.56 
 
 
628 aa  256  9e-67  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2448  methyl-accepting chemotaxis protein  34.01 
 
 
646 aa  254  2.0000000000000002e-66  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.718596  n/a   
 
 
-
 
NC_012917  PC1_1003  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.71 
 
 
596 aa  254  3e-66  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  32.6 
 
 
716 aa  254  5.000000000000001e-66  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
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