Gene PSPTO_1061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1061 
Symbol 
ID1182695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1156819 
End bp1158699 
Gene Length1881 bp 
Protein Length626 aa 
Translation table11 
GC content57% 
IMG OID637392440 
Productmethyl-accepting chemotaxis protein 
Protein accessionNP_790897 
Protein GI28868278 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.646209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTAA AGTTTCGTCA TAAAATCCTG CTGGCTGCGT CCGGCGTTGT GGTATTGGCG 
TTCGCGCTGT TCACGCTGTA CAACGATTAC CTGCAACGCA CCACCATCAA CCAGAACTTG
GAGTCCTCGG TGGGGCAGGC AGGGCAACTG ACCGCCAGCA GTGTGCAGAA CTGGCTGAGC
GGACGCATTC TGGTGCTGGA AAACCTCGCC CAGAACGTCG CGTTTCAGGG CGTGAATTCC
GACCTGAGCG GGCTGGTATC GCAGTCTTCA CTGGTGTCGA CCTTTCAGTT CACCTACGTT
GGTGACAGCA AAGGCATGTT CACTCAGCGG CCTAATGTCG ATATGCCGGC GGGTTACGAC
CCACGCCAGC GGCCTTGGTA CAAGTCCACG GTCGACGCCG GCAAAACCAT TCTCAGTGCG
CCGTATCTGG CTTCTGTCGG CGGCCTGGTG GTAACCATCG CCAGCCCGGT CAGGACCGCA
GGTCAGGTGA GCGGTGTGGC GGGCGGTGAC CTGAGCCTGG ACACGCTGGT CAAGATTATC
AATTCGGTCG AATTCGGCGG TATCGGTTAC GCCTTTCTGG TCAGTGGCGA CGGGCAGATC
ATCGTCAGCC CGGACAAAGA CCAGGTCATG AAAAACCTCA AGGATATCTA CCCCGGCCAG
ACCCTCAGCC TGGACGCGCG CTTGCGTGAG GTCAACCTCA ATGGTCAGCA AAGGCTGTTG
TCGTTCACCC CGATTACCGG GCTGCCCTCG GCTGACTGGT ACATCGGCTT GTCGATCGAC
AAGGACAAGG CCTACGCGCC GTTGAGCCAG TTCCGCAGCT CGGCGATGGT TGCTGTGTTG
ATTGCCGTGA CAGTGATTGC GTTGTTGTTG AGCCTGCTGA TTCGCGCACT GATGCGCCCA
CTGACCGACA TGGGCCGGGC AATGCAGGAC ATCGCCCAGG GCGAGGGTGA CTTGACCCGA
CGCCTGAGTA TTCAGGGCAA GGACGAGTTC GCCGAACTGG GCGGCTCGTT CAACCAGTTC
GTAGAGCGCG TGCATGCCTC CATTGCCGAG GTCTCCTCTG CCACGCTGCA GGTGCATGAC
CTGTCGCAAC GAGTGGTCAA CTCTTCCAAC TCGTCAATCG TCGGCTTTGA CGAGCAGAGC
GCCCGCACCA ACAGTGTGGC CGCTGCCATC AACGAGCTGG GTGCTGCGAC CCAGGAAATT
GCCCGTAACG CATCGGACGC CTCGATTCAG GCCAGTGAAG CCCGAACTCA GGCTGAAGAC
GGTCAGGTGG TGGTCGAAAA GACCATCAAC GCCATGAGCG AGTTGTCCGC CAAGATCAGC
GATTCCTGCA CGCAGATCGA GCAGCTCAAT GCCAGCACCG ACAACATCGG CCATATCCTC
GATGTCATCA AAGGCATTTC GCAACAAACC AACCTGCTGG CCCTCAACGC CGCCATCGAA
GCTGCGCGTG CGGGTGAAGC GGGCCGTGGT TTTGCGGTAG TCGCCGATGA AGTGCGTAAC
CTGGCTCATC GCACTCAGAC ATCCGCAGAC GAAATTCACA AGATGATCGG TGGTTTGCAG
ACCGGCTCAC AGCACGCTGT GCTCAACATG AACGAAAGTC AGTTGTCTAG TCAGGAAAGT
GTCGAAGTTG CCAATCAGGC GGGAAGTCGA CTGCGCGATG TAACGCGTCG TATTGGCGAA
ATCGATGGCA TGAACCAGTC TGTCGCAGCC GCCACAGAAG AGCAGACCGC TGTTGTTGAA
ACACTCAACA TTGATATCAA CCAGATCAAC ACACTGAATC AGCAAGGCGT CGCCAACCTT
AATGAAACCC TCAATGATTG CGCTGCGCTT TCACAGCAAG CCGGACGTTT GAAACAATTG
GTCGACAGTT TCAAGATCTG A
 
Protein sequence
MTLKFRHKIL LAASGVVVLA FALFTLYNDY LQRTTINQNL ESSVGQAGQL TASSVQNWLS 
GRILVLENLA QNVAFQGVNS DLSGLVSQSS LVSTFQFTYV GDSKGMFTQR PNVDMPAGYD
PRQRPWYKST VDAGKTILSA PYLASVGGLV VTIASPVRTA GQVSGVAGGD LSLDTLVKII
NSVEFGGIGY AFLVSGDGQI IVSPDKDQVM KNLKDIYPGQ TLSLDARLRE VNLNGQQRLL
SFTPITGLPS ADWYIGLSID KDKAYAPLSQ FRSSAMVAVL IAVTVIALLL SLLIRALMRP
LTDMGRAMQD IAQGEGDLTR RLSIQGKDEF AELGGSFNQF VERVHASIAE VSSATLQVHD
LSQRVVNSSN SSIVGFDEQS ARTNSVAAAI NELGAATQEI ARNASDASIQ ASEARTQAED
GQVVVEKTIN AMSELSAKIS DSCTQIEQLN ASTDNIGHIL DVIKGISQQT NLLALNAAIE
AARAGEAGRG FAVVADEVRN LAHRTQTSAD EIHKMIGGLQ TGSQHAVLNM NESQLSSQES
VEVANQAGSR LRDVTRRIGE IDGMNQSVAA ATEEQTAVVE TLNIDINQIN TLNQQGVANL
NETLNDCAAL SQQAGRLKQL VDSFKI