Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4715 |
Symbol | |
ID | 3714807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5323594 |
End bp | 5325735 |
Gene Length | 2142 bp |
Protein Length | 713 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | chemotaxis sensory transducer |
Protein accession | YP_350443 |
Protein GI | 77460936 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.233277 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.171171 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTCA AGTCGATCCA GTTTTCCGTG GCAGCCCTGG CCGGCGCCAT CGTGCTCAGC GTAGTCGCTG CGCTGGTGCT GTATGCGCTG TTCTCCGGTG CCCGCACCCA GGAAATGGTC CAGCAACGGA CTCAGGCCCA GTTCGAGCAA GTCATCGAAC AGCGCCTGAC GTCGCTGGCG CAGACTCAGG TCAGCCAGAT CCAGCGCGAA CTGGAAGCGC CGCTGCTGAT TGCCGGCGGA CTGGTGCGCG TCAACGCCCT GCTCGGCACA CCGGGCGCCG ACGGCCAGCC ACGCCTGAAC GTCAGCCGCG AGCAACTGAT CAGCCTGATC AAGGAAAACG TCGAGAAGAA TCCGAAGATT CTCGGCACCT ACATCGGCTG GGAAAAGAAC GCACTGGACC ACAATGACGC GGCCTACGTC GGCACTCAGG TTGTCGGGAT CGATCCCGCC AACGGGCGCT TCCTGCCGTG GTGGTTCCGC AACGACGACG GCACCCTGGG CCTGGACAAA CTGGTGGACG TCGACGACCA GAAAGTCCTG TCCACCGGCG TGCGCGCCAG CGAGTACTAC CTGTGCTCGA AAGAAACCAA AAAGTCCTGC GTGATCGATC CCGCCCCGTA CAAGGTCGGC GACAAGATCG TCATGCTCGC CTCCTTTATT GAACCGATCA TGCTCAACGG CGCCTTCCAG GGCATCGTCG GCGCCGACCT GTCGGTGAAC TTCATCCAGG AAATGCTCCT GGGCGCTAAC CAAAAGCTGT ACAGCGGCGC CGGGCAAATG GCCCTGATCG GCAGCAACGG CCGGATCGTC GCCTATACCA AGGACCCGGG CAAATTCGGC GAGAAGGTCA GCGACATTCT CGACGCCCAA CAGATTGCCA ACATGGCCAA TCTCAAGCGC GGCGAAGTGA CTTACACCGT CAATAAAGAG CAAGGCCGGA TCGAGTTGTA TCTGCCGTTC GGCATCGGCC AGACCGACGC GCGCTGGACA CTGATGCTGC AACTGCCGCT AGACGCGGTG ATGGCTGATC TGCAAAAGCT GCAAGGCGAC CTCGATGCCC AGCGCAAATC CGACACCTTC GGCATGGCCA TGGTCGGCCT GATCATCGCC GGCCTCGGCC TGCTGGTGAT CTGGCTGGTG GGCCACGGCA TCGCCCGTCC GCTGAAGCAA ATGGTGACCA TGCTCGATGA CATCGCTCAG GGCGAAGGTG ACCTGACCCG TCGTTTGACC AGTGATCGCA AAGACGAACT CGGCTCCATC GCCAAAGGCT TCAATACCTT CCTCGCCAAA TTGCAGGGGA TGATCACGCA GGTGGTGGCG TCGGTACAGA GCGTCAGCGA TTCCTCGGAA CACACCGCGG ACATCGCGAT CCGTACCAAT ATCGGCATAC AGAAACAGAT GGCCGAGATC GATCAGGTGG CCACCGCCGT GCAGGAAATG ACCGCCACCG CCCAGGACGT CGCGCGCAAC GCGACCCAGG CGGCACAAGC CGCCAGCCAT GCCGATCAGG CCGCCAGTCA GGGCATGCAG ATCGTGCGTG ACACCTCCAA CTCGATTGGC GTGCTGGCCG TGGAAATCGG CAAGGCCGTG AACGTGGTGC AGACCCTGGC CAAGGACAGC GAAAACATCA ACGCGATCCT GATCGCCATT CGCGGGATCG CCGAGCAGAC CAACCTGCTG GCCCTCAACG CGGCGATTGA AGCGGCCCGC GCGGGTGAAC AAGGACGCGG TTTTGCGGTG GTGGCCGATG AAGTGCGCAA CCTGGCGCAG AAAACCCAGC AGGCCACCGA AGAAATCCAG AGCATGATTC AGCAACTGCA ACAGGGTACT CGCGATGTAG TGCGGGTCAT GGAAGACAGC CAGAACCGCA CCGACGAAAG CGTGCAACAC GCGGCCAAGG CAGCCGAAGC GCTGGAAACC ATCACCCAGG CAGTGTCGGT GATCAACGAC ATGAACACCC AGATCGCCAG TGCTGCCGAA GAACAGAGCG CGGTGGCCGA CGACATCAAC CGCAACGTGA TCAATATCGG TCAGGTGGCC AATGAAGTGG CGGGTGGTGC GGATGAGTCG AGTTCGGCGA GTGCGGATCT GACCAAACTG GCGGAGCAGC AGCGGCGGTT GATCAATCAG TTCAAGGTGT AA
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Protein sequence | MKFKSIQFSV AALAGAIVLS VVAALVLYAL FSGARTQEMV QQRTQAQFEQ VIEQRLTSLA QTQVSQIQRE LEAPLLIAGG LVRVNALLGT PGADGQPRLN VSREQLISLI KENVEKNPKI LGTYIGWEKN ALDHNDAAYV GTQVVGIDPA NGRFLPWWFR NDDGTLGLDK LVDVDDQKVL STGVRASEYY LCSKETKKSC VIDPAPYKVG DKIVMLASFI EPIMLNGAFQ GIVGADLSVN FIQEMLLGAN QKLYSGAGQM ALIGSNGRIV AYTKDPGKFG EKVSDILDAQ QIANMANLKR GEVTYTVNKE QGRIELYLPF GIGQTDARWT LMLQLPLDAV MADLQKLQGD LDAQRKSDTF GMAMVGLIIA GLGLLVIWLV GHGIARPLKQ MVTMLDDIAQ GEGDLTRRLT SDRKDELGSI AKGFNTFLAK LQGMITQVVA SVQSVSDSSE HTADIAIRTN IGIQKQMAEI DQVATAVQEM TATAQDVARN ATQAAQAASH ADQAASQGMQ IVRDTSNSIG VLAVEIGKAV NVVQTLAKDS ENINAILIAI RGIAEQTNLL ALNAAIEAAR AGEQGRGFAV VADEVRNLAQ KTQQATEEIQ SMIQQLQQGT RDVVRVMEDS QNRTDESVQH AAKAAEALET ITQAVSVIND MNTQIASAAE EQSAVADDIN RNVINIGQVA NEVAGGADES SSASADLTKL AEQQRRLINQ FKV
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