Gene Pfl01_4715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4715 
Symbol 
ID3714807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5323594 
End bp5325735 
Gene Length2142 bp 
Protein Length713 aa 
Translation table11 
GC content61% 
IMG OID 
Productchemotaxis sensory transducer 
Protein accessionYP_350443 
Protein GI77460936 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.233277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.171171 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTCA AGTCGATCCA GTTTTCCGTG GCAGCCCTGG CCGGCGCCAT CGTGCTCAGC 
GTAGTCGCTG CGCTGGTGCT GTATGCGCTG TTCTCCGGTG CCCGCACCCA GGAAATGGTC
CAGCAACGGA CTCAGGCCCA GTTCGAGCAA GTCATCGAAC AGCGCCTGAC GTCGCTGGCG
CAGACTCAGG TCAGCCAGAT CCAGCGCGAA CTGGAAGCGC CGCTGCTGAT TGCCGGCGGA
CTGGTGCGCG TCAACGCCCT GCTCGGCACA CCGGGCGCCG ACGGCCAGCC ACGCCTGAAC
GTCAGCCGCG AGCAACTGAT CAGCCTGATC AAGGAAAACG TCGAGAAGAA TCCGAAGATT
CTCGGCACCT ACATCGGCTG GGAAAAGAAC GCACTGGACC ACAATGACGC GGCCTACGTC
GGCACTCAGG TTGTCGGGAT CGATCCCGCC AACGGGCGCT TCCTGCCGTG GTGGTTCCGC
AACGACGACG GCACCCTGGG CCTGGACAAA CTGGTGGACG TCGACGACCA GAAAGTCCTG
TCCACCGGCG TGCGCGCCAG CGAGTACTAC CTGTGCTCGA AAGAAACCAA AAAGTCCTGC
GTGATCGATC CCGCCCCGTA CAAGGTCGGC GACAAGATCG TCATGCTCGC CTCCTTTATT
GAACCGATCA TGCTCAACGG CGCCTTCCAG GGCATCGTCG GCGCCGACCT GTCGGTGAAC
TTCATCCAGG AAATGCTCCT GGGCGCTAAC CAAAAGCTGT ACAGCGGCGC CGGGCAAATG
GCCCTGATCG GCAGCAACGG CCGGATCGTC GCCTATACCA AGGACCCGGG CAAATTCGGC
GAGAAGGTCA GCGACATTCT CGACGCCCAA CAGATTGCCA ACATGGCCAA TCTCAAGCGC
GGCGAAGTGA CTTACACCGT CAATAAAGAG CAAGGCCGGA TCGAGTTGTA TCTGCCGTTC
GGCATCGGCC AGACCGACGC GCGCTGGACA CTGATGCTGC AACTGCCGCT AGACGCGGTG
ATGGCTGATC TGCAAAAGCT GCAAGGCGAC CTCGATGCCC AGCGCAAATC CGACACCTTC
GGCATGGCCA TGGTCGGCCT GATCATCGCC GGCCTCGGCC TGCTGGTGAT CTGGCTGGTG
GGCCACGGCA TCGCCCGTCC GCTGAAGCAA ATGGTGACCA TGCTCGATGA CATCGCTCAG
GGCGAAGGTG ACCTGACCCG TCGTTTGACC AGTGATCGCA AAGACGAACT CGGCTCCATC
GCCAAAGGCT TCAATACCTT CCTCGCCAAA TTGCAGGGGA TGATCACGCA GGTGGTGGCG
TCGGTACAGA GCGTCAGCGA TTCCTCGGAA CACACCGCGG ACATCGCGAT CCGTACCAAT
ATCGGCATAC AGAAACAGAT GGCCGAGATC GATCAGGTGG CCACCGCCGT GCAGGAAATG
ACCGCCACCG CCCAGGACGT CGCGCGCAAC GCGACCCAGG CGGCACAAGC CGCCAGCCAT
GCCGATCAGG CCGCCAGTCA GGGCATGCAG ATCGTGCGTG ACACCTCCAA CTCGATTGGC
GTGCTGGCCG TGGAAATCGG CAAGGCCGTG AACGTGGTGC AGACCCTGGC CAAGGACAGC
GAAAACATCA ACGCGATCCT GATCGCCATT CGCGGGATCG CCGAGCAGAC CAACCTGCTG
GCCCTCAACG CGGCGATTGA AGCGGCCCGC GCGGGTGAAC AAGGACGCGG TTTTGCGGTG
GTGGCCGATG AAGTGCGCAA CCTGGCGCAG AAAACCCAGC AGGCCACCGA AGAAATCCAG
AGCATGATTC AGCAACTGCA ACAGGGTACT CGCGATGTAG TGCGGGTCAT GGAAGACAGC
CAGAACCGCA CCGACGAAAG CGTGCAACAC GCGGCCAAGG CAGCCGAAGC GCTGGAAACC
ATCACCCAGG CAGTGTCGGT GATCAACGAC ATGAACACCC AGATCGCCAG TGCTGCCGAA
GAACAGAGCG CGGTGGCCGA CGACATCAAC CGCAACGTGA TCAATATCGG TCAGGTGGCC
AATGAAGTGG CGGGTGGTGC GGATGAGTCG AGTTCGGCGA GTGCGGATCT GACCAAACTG
GCGGAGCAGC AGCGGCGGTT GATCAATCAG TTCAAGGTGT AA
 
Protein sequence
MKFKSIQFSV AALAGAIVLS VVAALVLYAL FSGARTQEMV QQRTQAQFEQ VIEQRLTSLA 
QTQVSQIQRE LEAPLLIAGG LVRVNALLGT PGADGQPRLN VSREQLISLI KENVEKNPKI
LGTYIGWEKN ALDHNDAAYV GTQVVGIDPA NGRFLPWWFR NDDGTLGLDK LVDVDDQKVL
STGVRASEYY LCSKETKKSC VIDPAPYKVG DKIVMLASFI EPIMLNGAFQ GIVGADLSVN
FIQEMLLGAN QKLYSGAGQM ALIGSNGRIV AYTKDPGKFG EKVSDILDAQ QIANMANLKR
GEVTYTVNKE QGRIELYLPF GIGQTDARWT LMLQLPLDAV MADLQKLQGD LDAQRKSDTF
GMAMVGLIIA GLGLLVIWLV GHGIARPLKQ MVTMLDDIAQ GEGDLTRRLT SDRKDELGSI
AKGFNTFLAK LQGMITQVVA SVQSVSDSSE HTADIAIRTN IGIQKQMAEI DQVATAVQEM
TATAQDVARN ATQAAQAASH ADQAASQGMQ IVRDTSNSIG VLAVEIGKAV NVVQTLAKDS
ENINAILIAI RGIAEQTNLL ALNAAIEAAR AGEQGRGFAV VADEVRNLAQ KTQQATEEIQ
SMIQQLQQGT RDVVRVMEDS QNRTDESVQH AAKAAEALET ITQAVSVIND MNTQIASAAE
EQSAVADDIN RNVINIGQVA NEVAGGADES SSASADLTKL AEQQRRLINQ FKV