Gene PSPTO_2480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2480 
Symbol 
ID1184132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp2739439 
End bp2741328 
Gene Length1890 bp 
Protein Length629 aa 
Translation table11 
GC content58% 
IMG OID637393853 
Productmethyl-accepting chemotaxis protein 
Protein accessionNP_792292 
Protein GI28869673 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATC TGGGCTTCAG CAAGAAAATC CTTCTGGCCG CCGCGCTTAT CGTGGTTGTT 
GCGTTCAGCG TATTTATTGT CATCAATGAC TATCGACAAC GTCAGTCGCT CAAATCCAGT
GTCAAGTCGG AGCTGCAACA ACTGGGTACA TTGACCACGC AGAACATTCA GACATGGCTG
GAAAGCCGCA TTCAGTTGCT GCAATCGATG TCCCAGCAAG TCGCCGTGGA CGGCAAGGAG
CTGCCGCAGT TGCAGCGTGC CATTGGCCTG CCAACGTACA GCGACAACTT CCAGCTCAGT
TATTTTGGCA GCACCGAAGG CGTGATGTTT TCGGTGCCGG CCGGTAATCG CCCTGCAGAT
TACGACCCGC GTGCACGGGG CTGGTACAAG GCCGCACAAA ATGCGCCGGG CACCATCGTT
ACCGAACCGT ATATTGCAGC GTCGTCCGGC AAACTGGTCA TGACCATTGC CACGCCGGTC
AAGATTCAGA ACCAGCTTGC CGGTGTCGCC GGTGCTGACA TCTCGCTGGA CAGCGTTTCC
AAAATCATCA ACTCGCTGAA CTTCGATGGT CACGGTTATG CGTTTCTGGT CAGCGCCGAA
GGCAAGATTC TGGTGCATCC GGACAGCAAG CTGGTGCTCA AGAACATCAA TGAAGCCTAC
CCGGTAAATA CACCGAAAAT CGCCACGGGC GTGACTGAAA TCGATTCTGG CAAACAGCCC
GAGATCATCT CGTTCACGCC GGTTCAGGGC GTGGCGACCG CCAACTGGTA CGTGGCGCTG
GTGCTGGAGC AGGATTCTGC CTACGCCATG CTCACCGAGT TCCGCACCTC GGCCATCACG
GCAATGGTCG TTGTGGTGAT GGTGATCATT CTGCTGCTGG GCCCGTTGAT CCGCGTGCTT
ATGCAGCCGC TGCACCAGAT GGGCCGTGCG ATGCGCGATA TCGCTGACGG TGAGGGCGAT
CTGACCAAGC GTCTGGCCAT CACTTCGCAC GATGAGTTCG GCGCATTGGC AGAGTCGTTC
AACCACTTTG TCGAGCGTAT TCACACCTCG ATTCGCGAAG TGGCCTCCAC CGCAGCGCAA
CTGGGCGAAG TCGCCACGCG AGTGGTCAAG GTCTCCAACG CCTCGATGAG CAACTCCGAC
CAGCAGGCCA ATCGCACCGA AAGCGTGGCC GCTGCGATCA ACGAACTGGG CGCCGCCGCA
CAGGAAATCG CCCAGAACGC GGCACGCACC TCGCAACAGT CCAGCGATGC CAGCGGGCTG
GCCAGCGACG GCCAGGGCGT GGTGCAGCAG ACCATCAAGG CGATGAACGA GCTGTCCGGC
AAGATCAGCG AGTCGTGTGT GAACATCGAG AGCCTGAATG GCAAGACTGC TAACATCGGG
CAGATTCTCG AAGTGATCAC CAGCATTTCC CAGCAAACCA ATCTGTTGGC GCTTAACGCT
GCTATTGAGG CCGCACGCGC CGGTGAGGCG GGTCGCGGTT TCGCCGTGGT GGCTGACGAG
GTGCGCAACC TGGCACACCG CACTCAGGAC TCGGCGCAAC AAGTGCAAAA GATGATTGAA
GAGTTACAGG TCGGCGCTCG TGAAGCGGTG GTCAACATGA CTGAAAGCCA GCGTCAGAGC
GAGGACAGCG TGGGCATCGC CAACCTGGCC GGCGAGCGTC TGGGCAGCGT GACCCGCCGT
ATCGAAGAGA TCAACGGCAT GAACCAGTCG GTGGCGGCTG CAACAGAGGA ACAGACCTCG
GTGGTTGAGT CGATCAACGT CGACATCACC CACATCAACA CCCTCAACCA ACAGGGCGTC
GACAACCTGC GCCAGACTCT GGAAGCCTGC AACTCCCTGG AAGAACAAGC AGCTCGTCTG
CAACAACTGG TCGGCAGCTT CCGGATCTGA
 
Protein sequence
MKNLGFSKKI LLAAALIVVV AFSVFIVIND YRQRQSLKSS VKSELQQLGT LTTQNIQTWL 
ESRIQLLQSM SQQVAVDGKE LPQLQRAIGL PTYSDNFQLS YFGSTEGVMF SVPAGNRPAD
YDPRARGWYK AAQNAPGTIV TEPYIAASSG KLVMTIATPV KIQNQLAGVA GADISLDSVS
KIINSLNFDG HGYAFLVSAE GKILVHPDSK LVLKNINEAY PVNTPKIATG VTEIDSGKQP
EIISFTPVQG VATANWYVAL VLEQDSAYAM LTEFRTSAIT AMVVVVMVII LLLGPLIRVL
MQPLHQMGRA MRDIADGEGD LTKRLAITSH DEFGALAESF NHFVERIHTS IREVASTAAQ
LGEVATRVVK VSNASMSNSD QQANRTESVA AAINELGAAA QEIAQNAART SQQSSDASGL
ASDGQGVVQQ TIKAMNELSG KISESCVNIE SLNGKTANIG QILEVITSIS QQTNLLALNA
AIEAARAGEA GRGFAVVADE VRNLAHRTQD SAQQVQKMIE ELQVGAREAV VNMTESQRQS
EDSVGIANLA GERLGSVTRR IEEINGMNQS VAAATEEQTS VVESINVDIT HINTLNQQGV
DNLRQTLEAC NSLEEQAARL QQLVGSFRI