More than 300 homologs were found in PanDaTox collection
for query gene PSPTO_2480 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002947  PP_1371  methyl-accepting chemotaxis transducer  59.55 
 
 
624 aa  701    Pseudomonas putida KT2440  Bacteria  normal  normal  0.318672 
 
 
-
 
NC_010501  PputW619_1011  methyl-accepting chemotaxis sensory transducer with Cache sensor  59.62 
 
 
624 aa  712    Pseudomonas putida W619  Bacteria  normal  0.752503  hitchhiker  0.0000000000251926 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  55.48 
 
 
643 aa  679    Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  55.82 
 
 
626 aa  667    Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  55.64 
 
 
628 aa  681    Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_004578  PSPTO_1061  methyl-accepting chemotaxis protein  55.43 
 
 
626 aa  661    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.646209  n/a   
 
 
-
 
NC_009656  PSPA7_4876  chemotactic transducer PctA  60.79 
 
 
629 aa  746    Pseudomonas aeruginosa PA7  Bacteria  normal  0.647167  n/a   
 
 
-
 
NC_004578  PSPTO_2480  methyl-accepting chemotaxis protein  100 
 
 
629 aa  1276    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0906  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  55.34 
 
 
626 aa  661    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2246  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  94.28 
 
 
629 aa  1172    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.265681  normal  0.412954 
 
 
-
 
NC_007005  Psyr_3534  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  59.78 
 
 
629 aa  701    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.667463  normal  0.0882884 
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  56.44 
 
 
626 aa  687    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_007492  Pfl01_0354  chemotaxis sensory transducer, Cache sensor  74.04 
 
 
630 aa  917    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0425  methyl-accepting chemotaxis sensory transducer with Cache sensor  66.88 
 
 
630 aa  842    Pseudomonas putida W619  Bacteria  normal  0.461628  normal 
 
 
-
 
NC_007492  Pfl01_4431  chemotaxis sensory transducer, Cache sensor  61.15 
 
 
629 aa  738    Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_4443  methyl-accepting chemotaxis sensory transducer with Cache sensor  59.39 
 
 
624 aa  697    Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.0000033578 
 
 
-
 
NC_009439  Pmen_3309  methyl-accepting chemotaxis sensory transducer  62.1 
 
 
625 aa  765    Pseudomonas mendocina ymp  Bacteria  normal  normal  0.776822 
 
 
-
 
NC_009512  Pput_4352  methyl-accepting chemotaxis sensory transducer  59.55 
 
 
624 aa  701    Pseudomonas putida F1  Bacteria  normal  normal  0.0132701 
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  62.56 
 
 
632 aa  786    Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  62.06 
 
 
629 aa  776    Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  62.44 
 
 
632 aa  787    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  61.27 
 
 
629 aa  756    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  61.59 
 
 
629 aa  772    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  55.64 
 
 
628 aa  681    Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  34.66 
 
 
626 aa  374  1e-102  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2154  methyl-accepting chemotaxis sensory transducer  34.17 
 
 
627 aa  347  5e-94  Pseudomonas mendocina ymp  Bacteria  normal  0.0789614  normal  0.507372 
 
 
-
 
NC_008577  Shewana3_0895  methyl-accepting chemotaxis sensory transducer  34.91 
 
 
630 aa  340  2.9999999999999998e-92  Shewanella sp. ANA-3  Bacteria  normal  normal  0.174985 
 
 
-
 
NC_008322  Shewmr7_0930  methyl-accepting chemotaxis sensory transducer  34.58 
 
 
630 aa  333  5e-90  Shewanella sp. MR-7  Bacteria  normal  normal  0.257402 
 
 
-
 
NC_008321  Shewmr4_3042  methyl-accepting chemotaxis sensory transducer  34.44 
 
 
630 aa  331  2e-89  Shewanella sp. MR-4  Bacteria  normal  normal  0.397129 
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  35 
 
 
630 aa  330  6e-89  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  34.28 
 
 
630 aa  328  2.0000000000000001e-88  Shewanella baltica OS195  Bacteria  normal  0.840663  normal 
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.28 
 
 
630 aa  328  2.0000000000000001e-88  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  34.12 
 
 
630 aa  328  2.0000000000000001e-88  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  34.28 
 
 
630 aa  328  3e-88  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001423  methyl-accepting chemotaxis protein  32.8 
 
 
623 aa  325  2e-87  Vibrio sp. Ex25  Bacteria  normal  0.896179  n/a   
 
 
-
 
NC_009784  VIBHAR_06314  histidine kinase  31.37 
 
 
623 aa  322  9.999999999999999e-87  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  32.61 
 
 
630 aa  320  7e-86  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3477  putative methyl-accepting chemotaxis protein  34.17 
 
 
622 aa  316  7e-85  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000522984 
 
 
-
 
NC_009457  VC0395_A1741  methyl-accepting chemotaxis protein  34.71 
 
 
623 aa  316  8e-85  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0252  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.95 
 
 
623 aa  313  6.999999999999999e-84  Shewanella woodyi ATCC 51908  Bacteria  normal  0.866394  normal 
 
 
-
 
NC_009456  VC0395_0173  methyl-accepting chemotaxis protein  34.23 
 
 
639 aa  313  6.999999999999999e-84  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2121  methyl-accepting chemotaxis sensory transducer  34.98 
 
 
622 aa  308  1.0000000000000001e-82  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0316  methyl-accepting chemotaxis protein  36.1 
 
 
652 aa  309  1.0000000000000001e-82  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_1629  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.33 
 
 
623 aa  305  2.0000000000000002e-81  Shewanella pealeana ATCC 700345  Bacteria  normal  0.438395  n/a   
 
 
-
 
NC_009052  Sbal_2364  methyl-accepting chemotaxis sensory transducer  34.32 
 
 
622 aa  305  2.0000000000000002e-81  Shewanella baltica OS155  Bacteria  normal  0.493821  n/a   
 
 
-
 
NC_009438  Sputcn32_3017  methyl-accepting chemotaxis sensory transducer  33.44 
 
 
630 aa  304  3.0000000000000004e-81  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  33.92 
 
 
633 aa  300  5e-80  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_008322  Shewmr7_3825  methyl-accepting chemotaxis sensory transducer  33.23 
 
 
623 aa  300  6e-80  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_1383  methyl-accepting chemotaxis sensory transducer  33.89 
 
 
636 aa  297  4e-79  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00353653  normal  0.775857 
 
 
-
 
NC_008577  Shewana3_3950  methyl-accepting chemotaxis sensory transducer  33.07 
 
 
623 aa  295  1e-78  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3752  methyl-accepting chemotaxis sensory transducer  33.23 
 
 
623 aa  294  4e-78  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4557  methyl-accepting chemotaxis protein  32.66 
 
 
623 aa  293  7e-78  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  36.94 
 
 
638 aa  291  2e-77  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_013456  VEA_003139  methyl-accepting chemotaxis protein  34.47 
 
 
627 aa  287  2.9999999999999996e-76  Vibrio sp. Ex25  Bacteria  normal  0.116124  n/a   
 
 
-
 
NC_009783  VIBHAR_01884  hypothetical protein  34.31 
 
 
627 aa  288  2.9999999999999996e-76  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011989  Avi_0988  methyl-accepting chemotaxis protein  31.07 
 
 
695 aa  287  2.9999999999999996e-76  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00119  methyl-accepting chemotaxis protein  33.17 
 
 
626 aa  287  4e-76  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  33.03 
 
 
638 aa  286  7e-76  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_009438  Sputcn32_0323  methyl-accepting chemotaxis sensory transducer  33.07 
 
 
623 aa  284  3.0000000000000004e-75  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_4274  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.18 
 
 
623 aa  284  4.0000000000000003e-75  Shewanella baltica OS195  Bacteria  normal  normal  0.179842 
 
 
-
 
NC_011663  Sbal223_0194  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.18 
 
 
623 aa  284  4.0000000000000003e-75  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_4141  methyl-accepting chemotaxis sensory transducer  33.02 
 
 
623 aa  284  4.0000000000000003e-75  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  35.92 
 
 
636 aa  284  4.0000000000000003e-75  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_0193  methyl-accepting chemotaxis sensory transducer  33.02 
 
 
623 aa  283  6.000000000000001e-75  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0969  methyl-accepting chemotaxis sensory transducer  30.82 
 
 
631 aa  283  6.000000000000001e-75  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  36.05 
 
 
638 aa  282  1e-74  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_008700  Sama_3522  putative methyl-accepting chemotaxis sensory transducer  38.68 
 
 
636 aa  281  2e-74  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3449  methyl-accepting chemotaxis sensory transducer  31.58 
 
 
632 aa  280  8e-74  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0525  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.52 
 
 
632 aa  279  1e-73  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010506  Swoo_0712  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.34 
 
 
627 aa  279  1e-73  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0412159  hitchhiker  0.0000400753 
 
 
-
 
NC_009052  Sbal_0194  methyl-accepting chemotaxis sensory transducer  32.09 
 
 
623 aa  278  2e-73  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  34.23 
 
 
639 aa  275  1.0000000000000001e-72  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_004347  SO_4454  methyl-accepting chemotaxis protein  33.08 
 
 
642 aa  275  2.0000000000000002e-72  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_0271  methyl-accepting chemotaxis sensory transducer  33.69 
 
 
638 aa  273  5.000000000000001e-72  Shewanella sp. MR-4  Bacteria  normal  0.758035  hitchhiker  0.0000678809 
 
 
-
 
NC_011312  VSAL_I0799  methyl-accepting chemotaxis protein  31.72 
 
 
624 aa  273  7e-72  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3750  methyl-accepting chemotaxis sensory transducer  38.94 
 
 
638 aa  273  9e-72  Shewanella sp. MR-7  Bacteria  normal  0.666265  normal  0.186245 
 
 
-
 
NC_008577  Shewana3_0272  methyl-accepting chemotaxis sensory transducer  38.72 
 
 
638 aa  273  9e-72  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00090491  hitchhiker  0.000000349734 
 
 
-
 
NC_009052  Sbal_0282  methyl-accepting chemotaxis sensory transducer  33.08 
 
 
641 aa  271  2e-71  Shewanella baltica OS155  Bacteria  normal  0.0149105  n/a   
 
 
-
 
NC_009997  Sbal195_0283  methyl-accepting chemotaxis sensory transducer  33.08 
 
 
638 aa  272  2e-71  Shewanella baltica OS195  Bacteria  normal  0.411591  normal 
 
 
-
 
NC_009665  Shew185_0275  methyl-accepting chemotaxis sensory transducer  33.08 
 
 
638 aa  272  2e-71  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.34 
 
 
626 aa  272  2e-71  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0279  methyl-accepting chemotaxis sensory transducer  33.08 
 
 
638 aa  271  2.9999999999999997e-71  Shewanella baltica OS223  Bacteria  normal  0.983838  normal 
 
 
-
 
NC_009438  Sputcn32_0387  methyl-accepting chemotaxis sensory transducer  35 
 
 
638 aa  269  8.999999999999999e-71  Shewanella putrefaciens CN-32  Bacteria  normal  0.408395  n/a   
 
 
-
 
NC_009901  Spea_3492  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.47 
 
 
626 aa  268  2e-70  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001073  N-acetylglucosamine regulated methyl-accepting chemotaxis protein  31.26 
 
 
628 aa  268  2.9999999999999995e-70  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  46.46 
 
 
559 aa  267  5e-70  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_4247  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.56 
 
 
599 aa  267  5e-70  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007336  Reut_C6319  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  30.13 
 
 
601 aa  265  1e-69  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_0343  methyl-accepting chemotaxis sensory transducer  35.66 
 
 
645 aa  265  1e-69  Pseudomonas putida GB-1  Bacteria  normal  0.675969  normal 
 
 
-
 
NC_010682  Rpic_0536  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.23 
 
 
609 aa  265  2e-69  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_5980  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.82 
 
 
599 aa  264  4.999999999999999e-69  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3992  methyl-accepting chemotaxis sensory transducer  30.66 
 
 
599 aa  263  8.999999999999999e-69  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4375  methyl-accepting chemotaxis sensory transducer  30.66 
 
 
599 aa  263  8.999999999999999e-69  Burkholderia cenocepacia HI2424  Bacteria  normal  0.480091  normal 
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  35.21 
 
 
638 aa  263  1e-68  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B1642  methyl-accepting chemotaxis sensory transducer  30.08 
 
 
599 aa  261  2e-68  Burkholderia sp. 383  Bacteria  normal  normal  0.255489 
 
 
-
 
NC_012856  Rpic12D_0523  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.75 
 
 
608 aa  262  2e-68  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_1003  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.68 
 
 
596 aa  261  4e-68  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_0342  methyl-accepting chemotaxis sensory transducer  31.87 
 
 
645 aa  259  1e-67  Pseudomonas putida F1  Bacteria  normal  0.860801  normal 
 
 
-
 
NC_002947  PP_0320  methyl-accepting chemotaxis sensory transducer  31.87 
 
 
645 aa  258  2e-67  Pseudomonas putida KT2440  Bacteria  normal  decreased coverage  0.0000409011 
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  31.73 
 
 
628 aa  257  4e-67  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
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